Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 RPL10P17-201ENST00000453852 316 ntBASIC3.32□□□□□ -1.88
SDCBPO00560 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.32□□□□□ -1.88
SDCBPO00560 AC010307.1-201ENST00000467206 836 ntBASIC3.32□□□□□ -1.88
SDCBPO00560 AC016687.1-201ENST00000482574 353 ntBASIC3.32□□□□□ -1.88
SDCBPO00560 MGST2-204ENST00000506797 634 ntTSL 2 BASIC3.32□□□□□ -1.88
SDCBPO00560 IGBP1P5-201ENST00000507524 1000 ntBASIC3.32□□□□□ -1.88
SDCBPO00560 SNORA31.9-201ENST00000516429 84 ntBASIC3.32□□□□□ -1.88
SDCBPO00560 C1GALT1P3-201ENST00000522049 819 ntBASIC3.32□□□□□ -1.88
SDCBPO00560 AP003730.1-201ENST00000524605 285 ntBASIC3.32□□□□□ -1.88
SDCBPO00560 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC3.32□□□□□ -1.88
SDCBPO00560 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.32□□□□□ -1.88
SDCBPO00560 KPNA2P3-201ENST00000584190 848 ntBASIC3.32□□□□□ -1.88
SDCBPO00560 MIR3138-201ENST00000585238 82 ntBASIC3.32□□□□□ -1.88
SDCBPO00560 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC3.32□□□□□ -1.88
SDCBPO00560 AC006116.5-201ENST00000591936 559 ntBASIC3.32□□□□□ -1.88
SDCBPO00560 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC3.32□□□□□ -1.88
SDCBPO00560 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SDCBPO00560 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SDCBPO00560 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
SDCBPO00560 CCT8P1-201ENST00000413611 1657 ntBASIC3.32□□□□□ -1.88
SDCBPO00560 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.32□□□□□ -1.88
SDCBPO00560 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SDCBPO00560 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.32□□□□□ -1.88
SDCBPO00560 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
SDCBPO00560 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.31□□□□□ -1.88
SDCBPO00560 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
SDCBPO00560 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
SDCBPO00560 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC3.31□□□□□ -1.88
SDCBPO00560 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SDCBPO00560 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SDCBPO00560 OR11H5P-202ENST00000641612 1325 ntBASIC3.31□□□□□ -1.88
SDCBPO00560 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC3.31□□□□□ -1.88
SDCBPO00560 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
SDCBPO00560 RPS27AP11-201ENST00000402798 447 ntBASIC3.31□□□□□ -1.88
SDCBPO00560 AL138878.1-201ENST00000405131 347 ntBASIC3.31□□□□□ -1.88
SDCBPO00560 AC010740.1-201ENST00000417035 684 ntBASIC3.31□□□□□ -1.88
SDCBPO00560 COX6CP15-201ENST00000426313 211 ntBASIC3.31□□□□□ -1.88
SDCBPO00560 HIGD1AP4-201ENST00000430194 280 ntBASIC3.31□□□□□ -1.88
SDCBPO00560 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.31□□□□□ -1.88
SDCBPO00560 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.31□□□□□ -1.88
SDCBPO00560 PPIAP17-201ENST00000438507 471 ntBASIC3.31□□□□□ -1.88
SDCBPO00560 AC092809.1-201ENST00000441469 474 ntBASIC3.31□□□□□ -1.88
SDCBPO00560 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC3.31□□□□□ -1.88
SDCBPO00560 DNAJC19P1-201ENST00000455312 319 ntBASIC3.31□□□□□ -1.88
SDCBPO00560 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.31□□□□□ -1.88
SDCBPO00560 APOOP2-201ENST00000461561 539 ntBASIC3.31□□□□□ -1.88
SDCBPO00560 RN7SL860P-201ENST00000473738 223 ntBASIC3.31□□□□□ -1.88
SDCBPO00560 RN7SL809P-201ENST00000482040 297 ntBASIC3.31□□□□□ -1.88
SDCBPO00560 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.31□□□□□ -1.88
SDCBPO00560 MRPL49P2-201ENST00000521066 465 ntBASIC3.31□□□□□ -1.88
SDCBPO00560 AC138701.1-201ENST00000524329 714 ntBASIC3.31□□□□□ -1.88
SDCBPO00560 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.31□□□□□ -1.88
SDCBPO00560 MIR3939-201ENST00000582614 106 ntBASIC3.31□□□□□ -1.88
SDCBPO00560 ELOCP28-201ENST00000590044 317 ntBASIC3.31□□□□□ -1.88
SDCBPO00560 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC3.31□□□□□ -1.88
SDCBPO00560 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.31□□□□□ -1.88
SDCBPO00560 MIR7151-201ENST00000617477 60 ntBASIC3.31□□□□□ -1.88
SDCBPO00560 AL445567.2-201ENST00000618935 498 ntBASIC3.31□□□□□ -1.88
SDCBPO00560 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.31□□□□□ -1.88
SDCBPO00560 AL139089.1-201ENST00000620372 975 ntBASIC3.31□□□□□ -1.88
SDCBPO00560 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SDCBPO00560 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SDCBPO00560 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SDCBPO00560 AC107021.2-201ENST00000567714 2095 ntBASIC3.31□□□□□ -1.88
SDCBPO00560 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
SDCBPO00560 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SDCBPO00560 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC3.3□□□□□ -1.88
SDCBPO00560 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC3.3□□□□□ -1.88
SDCBPO00560 SLC2A3P1-201ENST00000519666 1451 ntBASIC3.3□□□□□ -1.88
SDCBPO00560 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.3□□□□□ -1.88
SDCBPO00560 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
SDCBPO00560 ENSAP1-201ENST00000392855 326 ntBASIC3.3□□□□□ -1.88
SDCBPO00560 HMGB3P19-201ENST00000403971 560 ntBASIC3.3□□□□□ -1.88
SDCBPO00560 AMZ2P2-201ENST00000406819 1057 ntBASIC3.3□□□□□ -1.88
SDCBPO00560 HSPE1P8-201ENST00000406997 288 ntBASIC3.3□□□□□ -1.88
SDCBPO00560 RN7SKP33-201ENST00000410942 340 ntBASIC3.3□□□□□ -1.88
SDCBPO00560 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC3.3□□□□□ -1.88
SDCBPO00560 TPT1P2-201ENST00000413105 503 ntBASIC3.3□□□□□ -1.88
SDCBPO00560 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.3□□□□□ -1.88
SDCBPO00560 MRPL50P1-201ENST00000431951 384 ntBASIC3.3□□□□□ -1.88
SDCBPO00560 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.3□□□□□ -1.88
SDCBPO00560 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
SDCBPO00560 RANP8-201ENST00000444720 713 ntBASIC3.3□□□□□ -1.88
SDCBPO00560 RPS17P13-201ENST00000448974 407 ntBASIC3.3□□□□□ -1.88
SDCBPO00560 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.3□□□□□ -1.88
SDCBPO00560 NDUFS5P3-201ENST00000450668 321 ntBASIC3.3□□□□□ -1.88
SDCBPO00560 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.3□□□□□ -1.88
SDCBPO00560 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC3.3□□□□□ -1.88
SDCBPO00560 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.3□□□□□ -1.88
SDCBPO00560 AC018797.3-201ENST00000513388 1241 ntBASIC3.3□□□□□ -1.88
SDCBPO00560 MTHFD2P4-201ENST00000515074 1025 ntBASIC3.3□□□□□ -1.88
SDCBPO00560 snoU109.6-201ENST00000516831 118 ntBASIC3.3□□□□□ -1.88
SDCBPO00560 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC3.3□□□□□ -1.88
SDCBPO00560 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.3□□□□□ -1.88
SDCBPO00560 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC3.3□□□□□ -1.88
SDCBPO00560 AL121839.1-201ENST00000556233 1185 ntBASIC3.3□□□□□ -1.88
SDCBPO00560 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.3□□□□□ -1.88
SDCBPO00560 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.3□□□□□ -1.88
SDCBPO00560 AC110743.1-201ENST00000584870 478 ntBASIC3.3□□□□□ -1.88
SDCBPO00560 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms