Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
FOXN3O00409 U8.4-201ENST00000363626 134 ntBASIC5.3□□□□□ -1.56
FOXN3O00409 RNA5SP428-201ENST00000365129 132 ntBASIC5.3□□□□□ -1.56
FOXN3O00409 RNU6-603P-201ENST00000411403 107 ntBASIC5.3□□□□□ -1.56
FOXN3O00409 AL450992.3-201ENST00000413192 568 ntBASIC5.3□□□□□ -1.56
FOXN3O00409 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.3□□□□□ -1.56
FOXN3O00409 GJA6P-201ENST00000415117 1042 ntBASIC5.3□□□□□ -1.56
FOXN3O00409 AF186996.5-201ENST00000418098 904 ntBASIC5.3□□□□□ -1.56
FOXN3O00409 ELOCP9-201ENST00000418624 239 ntBASIC5.3□□□□□ -1.56
FOXN3O00409 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC5.3□□□□□ -1.56
FOXN3O00409 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.3□□□□□ -1.56
FOXN3O00409 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC5.3□□□□□ -1.56
FOXN3O00409 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.3□□□□□ -1.56
FOXN3O00409 ACTR3P2-201ENST00000439585 1257 ntBASIC5.3□□□□□ -1.56
FOXN3O00409 AC093155.1-201ENST00000440164 826 ntBASIC5.3□□□□□ -1.56
FOXN3O00409 EEF1B2P5-201ENST00000444820 548 ntBASIC5.3□□□□□ -1.56
FOXN3O00409 COX6CP18-201ENST00000448769 222 ntBASIC5.3□□□□□ -1.56
FOXN3O00409 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.3□□□□□ -1.56
FOXN3O00409 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC5.3□□□□□ -1.56
FOXN3O00409 AC005532.2-201ENST00000467154 373 ntBASIC5.3□□□□□ -1.56
FOXN3O00409 AC011979.1-201ENST00000472300 483 ntBASIC5.3□□□□□ -1.56
FOXN3O00409 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC5.3□□□□□ -1.56
FOXN3O00409 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
FOXN3O00409 MRPS33P2-201ENST00000507850 322 ntBASIC5.3□□□□□ -1.56
FOXN3O00409 PGBD4P4-201ENST00000509673 613 ntBASIC5.3□□□□□ -1.56
FOXN3O00409 AC048346.1-201ENST00000510247 144 ntBASIC5.3□□□□□ -1.56
FOXN3O00409 AC119751.5-201ENST00000514077 770 ntBASIC5.3□□□□□ -1.56
FOXN3O00409 ENPP7P9-201ENST00000514456 627 ntBASIC5.3□□□□□ -1.56
FOXN3O00409 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.3□□□□□ -1.56
FOXN3O00409 FABP5P12-201ENST00000515543 389 ntBASIC5.3□□□□□ -1.56
FOXN3O00409 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.3□□□□□ -1.56
FOXN3O00409 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC5.3□□□□□ -1.56
FOXN3O00409 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC5.3□□□□□ -1.56
FOXN3O00409 AF279873.1-201ENST00000523393 313 ntBASIC5.3□□□□□ -1.56
FOXN3O00409 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.3□□□□□ -1.56
FOXN3O00409 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC5.3□□□□□ -1.56
FOXN3O00409 AC022832.1-201ENST00000530718 645 ntBASIC5.3□□□□□ -1.56
FOXN3O00409 AP001317.1-201ENST00000531194 960 ntBASIC5.3□□□□□ -1.56
FOXN3O00409 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.3□□□□□ -1.56
FOXN3O00409 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC5.3□□□□□ -1.56
FOXN3O00409 ZNF321P-202ENST00000550843 495 ntBASIC5.3□□□□□ -1.56
FOXN3O00409 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.3□□□□□ -1.56
FOXN3O00409 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.3□□□□□ -1.56
FOXN3O00409 AC145350.1-201ENST00000567426 208 ntBASIC5.3□□□□□ -1.56
FOXN3O00409 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC5.3□□□□□ -1.56
FOXN3O00409 MIR4666A-201ENST00000580160 79 ntBASIC5.3□□□□□ -1.56
FOXN3O00409 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC5.3□□□□□ -1.56
FOXN3O00409 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC5.3□□□□□ -1.56
FOXN3O00409 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.3□□□□□ -1.56
FOXN3O00409 AP004247.3-201ENST00000608682 624 ntBASIC5.3□□□□□ -1.56
FOXN3O00409 AC093799.2-201ENST00000610062 578 ntBASIC5.3□□□□□ -1.56
FOXN3O00409 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.3□□□□□ -1.56
FOXN3O00409 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC5.3□□□□□ -1.56
FOXN3O00409 AC015914.2-201ENST00000618167 288 ntBASIC5.3□□□□□ -1.56
FOXN3O00409 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.3□□□□□ -1.56
FOXN3O00409 CASC19-222ENST00000641321 1173 ntBASIC5.3□□□□□ -1.56
FOXN3O00409 USP9YP4-201ENST00000424401 1745 ntBASIC5.3□□□□□ -1.56
FOXN3O00409 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
FOXN3O00409 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
FOXN3O00409 AC009229.4-201ENST00000623854 1947 ntBASIC5.3□□□□□ -1.56
FOXN3O00409 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
FOXN3O00409 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
FOXN3O00409 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
FOXN3O00409 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
FOXN3O00409 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
FOXN3O00409 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.3□□□□□ -1.56
FOXN3O00409 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
FOXN3O00409 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.3□□□□□ -1.56
FOXN3O00409 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
FOXN3O00409 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
FOXN3O00409 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
FOXN3O00409 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.29□□□□□ -1.56
FOXN3O00409 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
FOXN3O00409 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
FOXN3O00409 AL357515.1-201ENST00000402967 542 ntBASIC5.29□□□□□ -1.56
FOXN3O00409 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.29□□□□□ -1.56
FOXN3O00409 RNU2-65P-201ENST00000410162 185 ntBASIC5.29□□□□□ -1.56
FOXN3O00409 RN7SKP229-201ENST00000410465 302 ntBASIC5.29□□□□□ -1.56
FOXN3O00409 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC5.29□□□□□ -1.56
FOXN3O00409 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.29□□□□□ -1.56
FOXN3O00409 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.29□□□□□ -1.56
FOXN3O00409 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC5.29□□□□□ -1.56
FOXN3O00409 MTCO2P20-201ENST00000437339 673 ntBASIC5.29□□□□□ -1.56
FOXN3O00409 COX7BP2-201ENST00000437976 242 ntBASIC5.29□□□□□ -1.56
FOXN3O00409 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.29□□□□□ -1.56
FOXN3O00409 AC092393.1-201ENST00000439625 742 ntBASIC5.29□□□□□ -1.56
FOXN3O00409 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.29□□□□□ -1.56
FOXN3O00409 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC5.29□□□□□ -1.56
FOXN3O00409 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.29□□□□□ -1.56
FOXN3O00409 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC5.29□□□□□ -1.56
FOXN3O00409 GYG1P1-201ENST00000460864 698 ntBASIC5.29□□□□□ -1.56
FOXN3O00409 RN7SL517P-201ENST00000462240 305 ntBASIC5.29□□□□□ -1.56
FOXN3O00409 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.29□□□□□ -1.56
FOXN3O00409 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.29□□□□□ -1.56
FOXN3O00409 AC090686.1-201ENST00000481577 749 ntBASIC5.29□□□□□ -1.56
FOXN3O00409 AC104971.1-201ENST00000495117 578 ntBASIC5.29□□□□□ -1.56
FOXN3O00409 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC5.29□□□□□ -1.56
FOXN3O00409 AC008885.2-201ENST00000509506 930 ntBASIC5.29□□□□□ -1.56
FOXN3O00409 AC004980.4-201ENST00000513375 203 ntBASIC5.29□□□□□ -1.56
FOXN3O00409 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms