Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 YWHAQP9-201ENST00000445891 512 ntBASIC4.59□□□□□ -1.67
CCDC188H7C350 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.59□□□□□ -1.67
CCDC188H7C350 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.59□□□□□ -1.67
CCDC188H7C350 OR52A4P-201ENST00000472867 958 ntBASIC4.59□□□□□ -1.67
CCDC188H7C350 AC017007.4-201ENST00000503353 1352 ntBASIC4.59□□□□□ -1.67
CCDC188H7C350 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.59□□□□□ -1.67
CCDC188H7C350 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.59□□□□□ -1.67
CCDC188H7C350 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.59□□□□□ -1.67
CCDC188H7C350 C1DP5-201ENST00000525775 383 ntBASIC4.59□□□□□ -1.67
CCDC188H7C350 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.59□□□□□ -1.67
CCDC188H7C350 AC011611.5-201ENST00000552477 578 ntBASIC4.59□□□□□ -1.67
CCDC188H7C350 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.59□□□□□ -1.67
CCDC188H7C350 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.59□□□□□ -1.67
CCDC188H7C350 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC4.59□□□□□ -1.67
CCDC188H7C350 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC4.59□□□□□ -1.67
CCDC188H7C350 MIR4716-201ENST00000579628 84 ntBASIC4.59□□□□□ -1.67
CCDC188H7C350 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.59□□□□□ -1.67
CCDC188H7C350 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.59□□□□□ -1.67
CCDC188H7C350 AL136520.1-201ENST00000600311 1322 ntBASIC4.59□□□□□ -1.67
CCDC188H7C350 AC073091.2-201ENST00000603205 907 ntBASIC4.59□□□□□ -1.67
CCDC188H7C350 AC020634.1-201ENST00000608701 549 ntBASIC4.59□□□□□ -1.67
CCDC188H7C350 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC188H7C350 MIR4727-201ENST00000622232 55 ntBASIC4.59□□□□□ -1.67
CCDC188H7C350 AC020978.9-201ENST00000624380 1141 ntBASIC4.59□□□□□ -1.67
CCDC188H7C350 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
CCDC188H7C350 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.59□□□□□ -1.67
CCDC188H7C350 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.59□□□□□ -1.67
CCDC188H7C350 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.59□□□□□ -1.67
CCDC188H7C350 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC188H7C350 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
CCDC188H7C350 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.58□□□□□ -1.68
CCDC188H7C350 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.58□□□□□ -1.68
CCDC188H7C350 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC188H7C350 ENSAP3-201ENST00000312710 333 ntBASIC4.58□□□□□ -1.68
CCDC188H7C350 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.58□□□□□ -1.68
CCDC188H7C350 RNA5SP191-201ENST00000362585 102 ntBASIC4.58□□□□□ -1.68
CCDC188H7C350 GCNT6-201ENST00000379591 934 ntBASIC4.58□□□□□ -1.68
CCDC188H7C350 AC019155.1-201ENST00000382242 574 ntBASIC4.58□□□□□ -1.68
CCDC188H7C350 RNU4-34P-201ENST00000410431 124 ntBASIC4.58□□□□□ -1.68
CCDC188H7C350 AC092745.2-202ENST00000411880 369 ntBASIC4.58□□□□□ -1.68
CCDC188H7C350 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.58□□□□□ -1.68
CCDC188H7C350 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.58□□□□□ -1.68
CCDC188H7C350 AL031736.2-201ENST00000426573 787 ntBASIC4.58□□□□□ -1.68
CCDC188H7C350 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC4.58□□□□□ -1.68
CCDC188H7C350 RBMY2QP-201ENST00000429799 1147 ntBASIC4.58□□□□□ -1.68
CCDC188H7C350 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.58□□□□□ -1.68
CCDC188H7C350 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC4.58□□□□□ -1.68
CCDC188H7C350 ELOCP11-201ENST00000436690 332 ntBASIC4.58□□□□□ -1.68
CCDC188H7C350 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.58□□□□□ -1.68
CCDC188H7C350 AC092170.1-201ENST00000440211 356 ntBASIC4.58□□□□□ -1.68
CCDC188H7C350 RPS7P5-201ENST00000441482 581 ntBASIC4.58□□□□□ -1.68
CCDC188H7C350 AL357520.1-201ENST00000441557 453 ntBASIC4.58□□□□□ -1.68
CCDC188H7C350 ELOCP16-201ENST00000444494 332 ntBASIC4.58□□□□□ -1.68
CCDC188H7C350 EEF1B2P5-201ENST00000444820 548 ntBASIC4.58□□□□□ -1.68
CCDC188H7C350 AC068135.1-201ENST00000446164 246 ntBASIC4.58□□□□□ -1.68
CCDC188H7C350 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC4.58□□□□□ -1.68
CCDC188H7C350 AC005532.2-201ENST00000467154 373 ntBASIC4.58□□□□□ -1.68
CCDC188H7C350 RN7SL585P-201ENST00000470538 280 ntBASIC4.58□□□□□ -1.68
CCDC188H7C350 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC4.58□□□□□ -1.68
CCDC188H7C350 RNA5SP92-201ENST00000516437 110 ntBASIC4.58□□□□□ -1.68
CCDC188H7C350 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.58□□□□□ -1.68
CCDC188H7C350 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.58□□□□□ -1.68
CCDC188H7C350 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC4.58□□□□□ -1.68
CCDC188H7C350 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.58□□□□□ -1.68
CCDC188H7C350 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.58□□□□□ -1.68
CCDC188H7C350 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.58□□□□□ -1.68
CCDC188H7C350 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.58□□□□□ -1.68
CCDC188H7C350 EDDM3DP-201ENST00000554692 434 ntBASIC4.58□□□□□ -1.68
CCDC188H7C350 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.58□□□□□ -1.68
CCDC188H7C350 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC188H7C350 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.58□□□□□ -1.68
CCDC188H7C350 MIR3908-201ENST00000579798 126 ntBASIC4.58□□□□□ -1.68
CCDC188H7C350 AC090312.2-201ENST00000582687 378 ntBASIC4.58□□□□□ -1.68
CCDC188H7C350 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.58□□□□□ -1.68
CCDC188H7C350 AP003117.1-201ENST00000602771 554 ntBASIC4.58□□□□□ -1.68
CCDC188H7C350 AC096586.1-201ENST00000610267 561 ntBASIC4.58□□□□□ -1.68
CCDC188H7C350 VN1R9P-201ENST00000614184 867 ntBASIC4.58□□□□□ -1.68
CCDC188H7C350 MIR6891-201ENST00000618788 93 ntBASIC4.58□□□□□ -1.68
CCDC188H7C350 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.58□□□□□ -1.68
CCDC188H7C350 MIR6853-201ENST00000619642 74 ntBASIC4.58□□□□□ -1.68
CCDC188H7C350 AP000943.4-201ENST00000622912 357 ntBASIC4.58□□□□□ -1.68
CCDC188H7C350 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.58□□□□□ -1.68
CCDC188H7C350 LINC01808-202ENST00000641680 1116 ntBASIC4.58□□□□□ -1.68
CCDC188H7C350 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
CCDC188H7C350 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.58□□□□□ -1.68
CCDC188H7C350 AC068254.2-201ENST00000623938 3577 ntBASIC4.58□□□□□ -1.68
CCDC188H7C350 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC188H7C350 OR14L1P-202ENST00000641545 3009 ntBASIC4.58□□□□□ -1.68
CCDC188H7C350 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
CCDC188H7C350 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.58□□□□□ -1.68
CCDC188H7C350 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.57□□□□□ -1.68
CCDC188H7C350 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
CCDC188H7C350 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC188H7C350 MAPK10-304ENST00000641341 3984 ntBASIC4.57□□□□□ -1.68
CCDC188H7C350 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC188H7C350 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC188H7C350 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC188H7C350 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC188H7C350 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.57□□□□□ -1.68
CCDC188H7C350 CYP1D1P-201ENST00000416662 1433 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms