Protein–RNA interactions for Protein: A0A0K0K1C0

TRBV11-1, T-cell receptor beta variable 11-1 (Fragment), humanhuman

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV11-1A0A0K0K1C0 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TRBV11-1A0A0K0K1C0 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
TRBV11-1A0A0K0K1C0 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
TRBV11-1A0A0K0K1C0 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TRBV11-1A0A0K0K1C0 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
TRBV11-1A0A0K0K1C0 GCNT6-201ENST00000379591 934 ntBASIC3.99□□□□□ -1.77
TRBV11-1A0A0K0K1C0 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.99□□□□□ -1.77
TRBV11-1A0A0K0K1C0 RNU6-317P-201ENST00000384031 107 ntBASIC3.99□□□□□ -1.77
TRBV11-1A0A0K0K1C0 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC3.99□□□□□ -1.77
TRBV11-1A0A0K0K1C0 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.99□□□□□ -1.77
TRBV11-1A0A0K0K1C0 RWDD4P2-201ENST00000426392 563 ntBASIC3.99□□□□□ -1.77
TRBV11-1A0A0K0K1C0 EIF2S2P3-201ENST00000428356 999 ntBASIC3.99□□□□□ -1.77
TRBV11-1A0A0K0K1C0 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC3.99□□□□□ -1.77
TRBV11-1A0A0K0K1C0 ELOCP3-201ENST00000439303 348 ntBASIC3.99□□□□□ -1.77
TRBV11-1A0A0K0K1C0 AC245517.2-201ENST00000442890 346 ntBASIC3.99□□□□□ -1.77
TRBV11-1A0A0K0K1C0 HMGB1P26-201ENST00000452520 628 ntBASIC3.99□□□□□ -1.77
TRBV11-1A0A0K0K1C0 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.99□□□□□ -1.77
TRBV11-1A0A0K0K1C0 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
TRBV11-1A0A0K0K1C0 RWDD4P1-201ENST00000488019 565 ntBASIC3.99□□□□□ -1.77
TRBV11-1A0A0K0K1C0 AC091167.1-201ENST00000492017 396 ntBASIC3.99□□□□□ -1.77
TRBV11-1A0A0K0K1C0 IGBP1P5-201ENST00000507524 1000 ntBASIC3.99□□□□□ -1.77
TRBV11-1A0A0K0K1C0 STMN1P2-201ENST00000508435 439 ntBASIC3.99□□□□□ -1.77
TRBV11-1A0A0K0K1C0 AC108043.1-201ENST00000512696 574 ntBASIC3.99□□□□□ -1.77
TRBV11-1A0A0K0K1C0 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC3.99□□□□□ -1.77
TRBV11-1A0A0K0K1C0 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
TRBV11-1A0A0K0K1C0 RNA5SP519-201ENST00000516480 119 ntBASIC3.99□□□□□ -1.77
TRBV11-1A0A0K0K1C0 MRPL49P2-201ENST00000521066 465 ntBASIC3.99□□□□□ -1.77
TRBV11-1A0A0K0K1C0 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.99□□□□□ -1.77
TRBV11-1A0A0K0K1C0 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.99□□□□□ -1.77
TRBV11-1A0A0K0K1C0 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.99□□□□□ -1.77
TRBV11-1A0A0K0K1C0 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC3.99□□□□□ -1.77
TRBV11-1A0A0K0K1C0 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
TRBV11-1A0A0K0K1C0 AC005034.4-201ENST00000603612 899 ntBASIC3.99□□□□□ -1.77
TRBV11-1A0A0K0K1C0 AC023043.4-201ENST00000612081 449 ntBASIC3.99□□□□□ -1.77
TRBV11-1A0A0K0K1C0 AL445567.2-201ENST00000618935 498 ntBASIC3.99□□□□□ -1.77
TRBV11-1A0A0K0K1C0 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
TRBV11-1A0A0K0K1C0 AL445363.3-201ENST00000623080 671 ntBASIC3.99□□□□□ -1.77
TRBV11-1A0A0K0K1C0 AL356121.2-201ENST00000624715 780 ntBASIC3.99□□□□□ -1.77
TRBV11-1A0A0K0K1C0 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.99□□□□□ -1.77
TRBV11-1A0A0K0K1C0 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.99□□□□□ -1.77
TRBV11-1A0A0K0K1C0 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TRBV11-1A0A0K0K1C0 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC3.99□□□□□ -1.77
TRBV11-1A0A0K0K1C0 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
TRBV11-1A0A0K0K1C0 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
TRBV11-1A0A0K0K1C0 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
TRBV11-1A0A0K0K1C0 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC3.98□□□□□ -1.77
TRBV11-1A0A0K0K1C0 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
TRBV11-1A0A0K0K1C0 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
TRBV11-1A0A0K0K1C0 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
TRBV11-1A0A0K0K1C0 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.98□□□□□ -1.77
TRBV11-1A0A0K0K1C0 RNU1-14P-201ENST00000362759 152 ntBASIC3.98□□□□□ -1.77
TRBV11-1A0A0K0K1C0 RNA5SP22-201ENST00000365393 109 ntBASIC3.98□□□□□ -1.77
TRBV11-1A0A0K0K1C0 MIR195-201ENST00000385194 87 ntBASIC3.98□□□□□ -1.77
TRBV11-1A0A0K0K1C0 ZNF736P10Y-201ENST00000403990 1110 ntBASIC3.98□□□□□ -1.77
TRBV11-1A0A0K0K1C0 RN7SKP167-201ENST00000411047 285 ntBASIC3.98□□□□□ -1.77
TRBV11-1A0A0K0K1C0 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.98□□□□□ -1.77
TRBV11-1A0A0K0K1C0 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
TRBV11-1A0A0K0K1C0 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC3.98□□□□□ -1.77
TRBV11-1A0A0K0K1C0 AL157831.1-201ENST00000426134 473 ntBASIC3.98□□□□□ -1.77
TRBV11-1A0A0K0K1C0 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC3.98□□□□□ -1.77
TRBV11-1A0A0K0K1C0 AC069285.2-201ENST00000440210 275 ntBASIC3.98□□□□□ -1.77
TRBV11-1A0A0K0K1C0 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
TRBV11-1A0A0K0K1C0 NDUFS5P3-201ENST00000450668 321 ntBASIC3.98□□□□□ -1.77
TRBV11-1A0A0K0K1C0 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC3.98□□□□□ -1.77
TRBV11-1A0A0K0K1C0 AC010469.1-201ENST00000463864 576 ntBASIC3.98□□□□□ -1.77
TRBV11-1A0A0K0K1C0 RN7SL691P-201ENST00000494487 301 ntBASIC3.98□□□□□ -1.77
TRBV11-1A0A0K0K1C0 AC023050.1-201ENST00000498198 304 ntBASIC3.98□□□□□ -1.77
TRBV11-1A0A0K0K1C0 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
TRBV11-1A0A0K0K1C0 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.98□□□□□ -1.77
TRBV11-1A0A0K0K1C0 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.98□□□□□ -1.77
TRBV11-1A0A0K0K1C0 MYL12AP1-201ENST00000518490 515 ntBASIC3.98□□□□□ -1.77
TRBV11-1A0A0K0K1C0 AC090151.1-201ENST00000520784 730 ntBASIC3.98□□□□□ -1.77
TRBV11-1A0A0K0K1C0 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.98□□□□□ -1.77
TRBV11-1A0A0K0K1C0 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
TRBV11-1A0A0K0K1C0 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.98□□□□□ -1.77
TRBV11-1A0A0K0K1C0 AC136624.4-201ENST00000573044 370 ntBASIC3.98□□□□□ -1.77
TRBV11-1A0A0K0K1C0 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.98□□□□□ -1.77
TRBV11-1A0A0K0K1C0 NF1P5-201ENST00000588287 448 ntBASIC3.98□□□□□ -1.77
TRBV11-1A0A0K0K1C0 VN1R84P-201ENST00000593697 235 ntBASIC3.98□□□□□ -1.77
TRBV11-1A0A0K0K1C0 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC3.98□□□□□ -1.77
TRBV11-1A0A0K0K1C0 AC010680.3-201ENST00000604215 520 ntBASIC3.98□□□□□ -1.77
TRBV11-1A0A0K0K1C0 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.98□□□□□ -1.77
TRBV11-1A0A0K0K1C0 AL353726.1-201ENST00000614041 1000 ntBASIC3.98□□□□□ -1.77
TRBV11-1A0A0K0K1C0 AL138721.1-201ENST00000616756 179 ntBASIC3.98□□□□□ -1.77
TRBV11-1A0A0K0K1C0 AP003072.4-201ENST00000624580 310 ntBASIC3.98□□□□□ -1.77
TRBV11-1A0A0K0K1C0 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.98□□□□□ -1.77
TRBV11-1A0A0K0K1C0 FTO-203ENST00000460382 1517 ntTSL 5 BASIC3.98□□□□□ -1.77
TRBV11-1A0A0K0K1C0 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
TRBV11-1A0A0K0K1C0 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
TRBV11-1A0A0K0K1C0 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
TRBV11-1A0A0K0K1C0 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.98□□□□□ -1.77
TRBV11-1A0A0K0K1C0 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.98□□□□□ -1.77
TRBV11-1A0A0K0K1C0 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
TRBV11-1A0A0K0K1C0 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.98□□□□□ -1.77
TRBV11-1A0A0K0K1C0 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
TRBV11-1A0A0K0K1C0 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
TRBV11-1A0A0K0K1C0 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
TRBV11-1A0A0K0K1C0 RNA5SP502-201ENST00000362694 119 ntBASIC3.97□□□□□ -1.77
TRBV11-1A0A0K0K1C0 SNORA62.2-201ENST00000364672 152 ntBASIC3.97□□□□□ -1.77
TRBV11-1A0A0K0K1C0 RNU6-185P-201ENST00000384421 107 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 133.1 ms