Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PCDHGA3Q9Y5H0 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
PCDHGA3Q9Y5H0 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.39□□□□□ -1.55
PCDHGA3Q9Y5H0 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PCDHGA3Q9Y5H0 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.39□□□□□ -1.55
PCDHGA3Q9Y5H0 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
PCDHGA3Q9Y5H0 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PCDHGA3Q9Y5H0 AC016716.1-201ENST00000265882 708 ntBASIC5.39□□□□□ -1.55
PCDHGA3Q9Y5H0 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
PCDHGA3Q9Y5H0 RN7SKP145-201ENST00000363291 303 ntBASIC5.39□□□□□ -1.55
PCDHGA3Q9Y5H0 RN7SKP279-201ENST00000411383 298 ntBASIC5.39□□□□□ -1.55
PCDHGA3Q9Y5H0 AC079809.1-201ENST00000415468 276 ntBASIC5.39□□□□□ -1.55
PCDHGA3Q9Y5H0 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PCDHGA3Q9Y5H0 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC5.39□□□□□ -1.55
PCDHGA3Q9Y5H0 RBMY2KP-201ENST00000418221 992 ntBASIC5.39□□□□□ -1.55
PCDHGA3Q9Y5H0 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.39□□□□□ -1.55
PCDHGA3Q9Y5H0 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC5.39□□□□□ -1.55
PCDHGA3Q9Y5H0 RPS27P18-201ENST00000431701 247 ntBASIC5.39□□□□□ -1.55
PCDHGA3Q9Y5H0 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
PCDHGA3Q9Y5H0 CYCSP12-201ENST00000437729 300 ntBASIC5.39□□□□□ -1.55
PCDHGA3Q9Y5H0 PTMAP6-201ENST00000439110 327 ntBASIC5.39□□□□□ -1.55
PCDHGA3Q9Y5H0 AC016772.1-201ENST00000444170 1261 ntBASIC5.39□□□□□ -1.55
PCDHGA3Q9Y5H0 RPS26P56-201ENST00000444468 240 ntBASIC5.39□□□□□ -1.55
PCDHGA3Q9Y5H0 RPS27AP8-201ENST00000452665 445 ntBASIC5.39□□□□□ -1.55
PCDHGA3Q9Y5H0 AC073387.1-201ENST00000453261 709 ntBASIC5.39□□□□□ -1.55
PCDHGA3Q9Y5H0 AL645937.3-201ENST00000453647 936 ntBASIC5.39□□□□□ -1.55
PCDHGA3Q9Y5H0 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC5.39□□□□□ -1.55
PCDHGA3Q9Y5H0 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.39□□□□□ -1.55
PCDHGA3Q9Y5H0 RN7SL172P-201ENST00000460535 303 ntBASIC5.39□□□□□ -1.55
PCDHGA3Q9Y5H0 MTATP6P22-201ENST00000507369 598 ntBASIC5.39□□□□□ -1.55
PCDHGA3Q9Y5H0 HMGB1P28-201ENST00000507778 552 ntBASIC5.39□□□□□ -1.55
PCDHGA3Q9Y5H0 GLUD1P3-202ENST00000508551 200 ntBASIC5.39□□□□□ -1.55
PCDHGA3Q9Y5H0 AC002456.2-201ENST00000509356 380 ntBASIC5.39□□□□□ -1.55
PCDHGA3Q9Y5H0 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.39□□□□□ -1.55
PCDHGA3Q9Y5H0 SMARCE1P4-201ENST00000523647 241 ntBASIC5.39□□□□□ -1.55
PCDHGA3Q9Y5H0 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.39□□□□□ -1.55
PCDHGA3Q9Y5H0 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC5.39□□□□□ -1.55
PCDHGA3Q9Y5H0 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC5.39□□□□□ -1.55
PCDHGA3Q9Y5H0 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.39□□□□□ -1.55
PCDHGA3Q9Y5H0 LYZ-203ENST00000549690 669 ntTSL 2 BASIC5.39□□□□□ -1.55
PCDHGA3Q9Y5H0 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC5.39□□□□□ -1.55
PCDHGA3Q9Y5H0 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.39□□□□□ -1.55
PCDHGA3Q9Y5H0 AC069304.2-201ENST00000605154 435 ntBASIC5.39□□□□□ -1.55
PCDHGA3Q9Y5H0 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.39□□□□□ -1.55
PCDHGA3Q9Y5H0 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PCDHGA3Q9Y5H0 AC008443.7-201ENST00000622195 246 ntBASIC5.39□□□□□ -1.55
PCDHGA3Q9Y5H0 AC132068.1-201ENST00000623805 459 ntBASIC5.39□□□□□ -1.55
PCDHGA3Q9Y5H0 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC5.39□□□□□ -1.55
PCDHGA3Q9Y5H0 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC5.39□□□□□ -1.55
PCDHGA3Q9Y5H0 AC120349.2-201ENST00000625002 298 ntBASIC5.39□□□□□ -1.55
PCDHGA3Q9Y5H0 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PCDHGA3Q9Y5H0 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
PCDHGA3Q9Y5H0 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
PCDHGA3Q9Y5H0 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.39□□□□□ -1.55
PCDHGA3Q9Y5H0 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PCDHGA3Q9Y5H0 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PCDHGA3Q9Y5H0 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.39□□□□□ -1.55
PCDHGA3Q9Y5H0 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PCDHGA3Q9Y5H0 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHGA3Q9Y5H0 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.38□□□□□ -1.55
PCDHGA3Q9Y5H0 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.38□□□□□ -1.55
PCDHGA3Q9Y5H0 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHGA3Q9Y5H0 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHGA3Q9Y5H0 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHGA3Q9Y5H0 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHGA3Q9Y5H0 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
PCDHGA3Q9Y5H0 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHGA3Q9Y5H0 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.38□□□□□ -1.55
PCDHGA3Q9Y5H0 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
PCDHGA3Q9Y5H0 RNU6-178P-201ENST00000384631 104 ntBASIC5.38□□□□□ -1.55
PCDHGA3Q9Y5H0 AC068533.2-201ENST00000411872 306 ntBASIC5.38□□□□□ -1.55
PCDHGA3Q9Y5H0 AC211486.3-201ENST00000412694 621 ntBASIC5.38□□□□□ -1.55
PCDHGA3Q9Y5H0 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC5.38□□□□□ -1.55
PCDHGA3Q9Y5H0 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.38□□□□□ -1.55
PCDHGA3Q9Y5H0 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.38□□□□□ -1.55
PCDHGA3Q9Y5H0 AL139148.1-201ENST00000427122 680 ntBASIC5.38□□□□□ -1.55
PCDHGA3Q9Y5H0 AC023347.2-201ENST00000433994 462 ntBASIC5.38□□□□□ -1.55
PCDHGA3Q9Y5H0 GSTA7P-201ENST00000438425 448 ntBASIC5.38□□□□□ -1.55
PCDHGA3Q9Y5H0 AC073648.4-201ENST00000442655 781 ntBASIC5.38□□□□□ -1.55
PCDHGA3Q9Y5H0 AC019185.1-201ENST00000442718 389 ntBASIC5.38□□□□□ -1.55
PCDHGA3Q9Y5H0 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC5.38□□□□□ -1.55
PCDHGA3Q9Y5H0 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.38□□□□□ -1.55
PCDHGA3Q9Y5H0 RPS23P2-201ENST00000463671 415 ntBASIC5.38□□□□□ -1.55
PCDHGA3Q9Y5H0 AC013828.1-201ENST00000481845 158 ntBASIC5.38□□□□□ -1.55
PCDHGA3Q9Y5H0 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHGA3Q9Y5H0 AC091435.1-201ENST00000505442 584 ntBASIC5.38□□□□□ -1.55
PCDHGA3Q9Y5H0 HIGD1AP14-201ENST00000507617 282 ntBASIC5.38□□□□□ -1.55
PCDHGA3Q9Y5H0 AC105384.2-201ENST00000508433 640 ntBASIC5.38□□□□□ -1.55
PCDHGA3Q9Y5H0 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.38□□□□□ -1.55
PCDHGA3Q9Y5H0 RFPL4AP5-201ENST00000514977 504 ntBASIC5.38□□□□□ -1.55
PCDHGA3Q9Y5H0 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC5.38□□□□□ -1.55
PCDHGA3Q9Y5H0 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.38□□□□□ -1.55
PCDHGA3Q9Y5H0 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC5.38□□□□□ -1.55
PCDHGA3Q9Y5H0 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
PCDHGA3Q9Y5H0 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC5.38□□□□□ -1.55
PCDHGA3Q9Y5H0 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.38□□□□□ -1.55
PCDHGA3Q9Y5H0 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC5.38□□□□□ -1.55
PCDHGA3Q9Y5H0 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC5.38□□□□□ -1.55
PCDHGA3Q9Y5H0 ACTR3BP3-201ENST00000565577 979 ntBASIC5.38□□□□□ -1.55
PCDHGA3Q9Y5H0 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms