Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 SKP1P3-201ENST00000429280 487 ntBASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 PPIAP13-201ENST00000434706 478 ntBASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 MTND1P34-201ENST00000438556 671 ntBASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 FHP1-201ENST00000442741 703 ntBASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 RNU6-1218P-201ENST00000458990 108 ntBASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 RPL7P1-201ENST00000468161 747 ntBASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 RPL7P9-201ENST00000468715 747 ntBASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 BX284632.1-201ENST00000478218 541 ntBASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 AC022133.1-201ENST00000490961 571 ntBASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 RN7SL447P-201ENST00000494711 245 ntBASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 IGBP1P4-201ENST00000503202 879 ntBASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 AC110775.1-201ENST00000513721 462 ntBASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 snoU109.6-201ENST00000516831 118 ntBASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 AC068714.1-201ENST00000559623 800 ntBASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 AC009027.1-201ENST00000604510 479 ntBASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 CLPTM1LP1-201ENST00000604519 484 ntBASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 AC090425.2-201ENST00000608818 501 ntBASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 AL136981.2-201ENST00000617319 734 ntBASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 AC026585.1-201ENST00000619582 524 ntBASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 CASC19-204ENST00000641001 2055 ntBASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 AC134882.1-201ENST00000603738 1676 ntBASIC5.34□□□□□ -1.56
PCDHB1Q9Y5F3 AC092162.3-201ENST00000624511 1624 ntBASIC5.34□□□□□ -1.56
PCDHB1Q9Y5F3 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PCDHB1Q9Y5F3 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
PCDHB1Q9Y5F3 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PCDHB1Q9Y5F3 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.33□□□□□ -1.56
PCDHB1Q9Y5F3 MTND4P5-201ENST00000435821 1374 ntBASIC5.33□□□□□ -1.56
PCDHB1Q9Y5F3 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.33□□□□□ -1.56
PCDHB1Q9Y5F3 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.33□□□□□ -1.56
PCDHB1Q9Y5F3 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
PCDHB1Q9Y5F3 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
PCDHB1Q9Y5F3 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
PCDHB1Q9Y5F3 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
PCDHB1Q9Y5F3 MIR133A2-201ENST00000347538 102 ntBASIC5.33□□□□□ -1.56
PCDHB1Q9Y5F3 Y_RNA.436-201ENST00000384097 102 ntBASIC5.33□□□□□ -1.56
PCDHB1Q9Y5F3 RNA5SP339-201ENST00000390987 122 ntBASIC5.33□□□□□ -1.56
PCDHB1Q9Y5F3 RNA5SP241-201ENST00000391326 114 ntBASIC5.33□□□□□ -1.56
PCDHB1Q9Y5F3 AL021407.1-201ENST00000404531 386 ntBASIC5.33□□□□□ -1.56
PCDHB1Q9Y5F3 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.33□□□□□ -1.56
PCDHB1Q9Y5F3 RNA5SP487-201ENST00000410186 122 ntBASIC5.33□□□□□ -1.56
PCDHB1Q9Y5F3 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC5.33□□□□□ -1.56
PCDHB1Q9Y5F3 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.33□□□□□ -1.56
PCDHB1Q9Y5F3 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC5.33□□□□□ -1.56
PCDHB1Q9Y5F3 AL589823.1-201ENST00000429577 183 ntBASIC5.33□□□□□ -1.56
PCDHB1Q9Y5F3 ATP5C1P1-201ENST00000441945 895 ntBASIC5.33□□□□□ -1.56
PCDHB1Q9Y5F3 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.33□□□□□ -1.56
PCDHB1Q9Y5F3 ANK3-207ENST00000460468 677 ntTSL 3 BASIC5.33□□□□□ -1.56
PCDHB1Q9Y5F3 AC010307.1-201ENST00000467206 836 ntBASIC5.33□□□□□ -1.56
PCDHB1Q9Y5F3 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.33□□□□□ -1.56
PCDHB1Q9Y5F3 AC008494.2-201ENST00000514544 370 ntBASIC5.33□□□□□ -1.56
PCDHB1Q9Y5F3 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.33□□□□□ -1.56
PCDHB1Q9Y5F3 AP000859.1-201ENST00000525536 307 ntBASIC5.33□□□□□ -1.56
PCDHB1Q9Y5F3 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC5.33□□□□□ -1.56
PCDHB1Q9Y5F3 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.33□□□□□ -1.56
PCDHB1Q9Y5F3 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.33□□□□□ -1.56
PCDHB1Q9Y5F3 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.33□□□□□ -1.56
PCDHB1Q9Y5F3 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.33□□□□□ -1.56
PCDHB1Q9Y5F3 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
PCDHB1Q9Y5F3 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
PCDHB1Q9Y5F3 AL031985.2-201ENST00000600955 480 ntBASIC5.33□□□□□ -1.56
PCDHB1Q9Y5F3 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC5.33□□□□□ -1.56
PCDHB1Q9Y5F3 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC5.33□□□□□ -1.56
PCDHB1Q9Y5F3 AL607023.1-201ENST00000620045 248 ntBASIC5.33□□□□□ -1.56
PCDHB1Q9Y5F3 Z69908.1-201ENST00000622603 247 ntBASIC5.33□□□□□ -1.56
PCDHB1Q9Y5F3 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC5.33□□□□□ -1.56
PCDHB1Q9Y5F3 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PCDHB1Q9Y5F3 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.33□□□□□ -1.56
PCDHB1Q9Y5F3 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
PCDHB1Q9Y5F3 ADAM24P-201ENST00000398655 2101 ntBASIC5.33□□□□□ -1.56
PCDHB1Q9Y5F3 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PCDHB1Q9Y5F3 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PCDHB1Q9Y5F3 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.33□□□□□ -1.56
PCDHB1Q9Y5F3 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PCDHB1Q9Y5F3 AL353743.4-201ENST00000422653 1547 ntBASIC5.33□□□□□ -1.56
PCDHB1Q9Y5F3 AC010329.2-201ENST00000595195 2737 ntBASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
PCDHB1Q9Y5F3 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms