Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 MIR6780A-201ENST00000615089 68 ntBASIC3.82□□□□□ -1.8
RHBDD3Q9Y3P4 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.82□□□□□ -1.8
RHBDD3Q9Y3P4 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC3.82□□□□□ -1.8
RHBDD3Q9Y3P4 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC3.82□□□□□ -1.8
RHBDD3Q9Y3P4 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.82□□□□□ -1.8
RHBDD3Q9Y3P4 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.82□□□□□ -1.8
RHBDD3Q9Y3P4 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RHBDD3Q9Y3P4 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.82□□□□□ -1.8
RHBDD3Q9Y3P4 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
RHBDD3Q9Y3P4 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
RHBDD3Q9Y3P4 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RHBDD3Q9Y3P4 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RHBDD3Q9Y3P4 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RHBDD3Q9Y3P4 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.81□□□□□ -1.8
RHBDD3Q9Y3P4 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.81□□□□□ -1.8
RHBDD3Q9Y3P4 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
RHBDD3Q9Y3P4 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RHBDD3Q9Y3P4 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.81□□□□□ -1.8
RHBDD3Q9Y3P4 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RHBDD3Q9Y3P4 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RHBDD3Q9Y3P4 AC022031.1-201ENST00000585985 2593 ntBASIC3.81□□□□□ -1.8
RHBDD3Q9Y3P4 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.81□□□□□ -1.8
RHBDD3Q9Y3P4 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
RHBDD3Q9Y3P4 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RHBDD3Q9Y3P4 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
RHBDD3Q9Y3P4 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RHBDD3Q9Y3P4 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
RHBDD3Q9Y3P4 RPS20P14-201ENST00000412545 360 ntBASIC3.81□□□□□ -1.8
RHBDD3Q9Y3P4 UQCRBP1-201ENST00000421129 336 ntBASIC3.81□□□□□ -1.8
RHBDD3Q9Y3P4 RPL7AP25-201ENST00000423357 805 ntBASIC3.81□□□□□ -1.8
RHBDD3Q9Y3P4 PRELID3BP10-201ENST00000431957 584 ntBASIC3.81□□□□□ -1.8
RHBDD3Q9Y3P4 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.81□□□□□ -1.8
RHBDD3Q9Y3P4 AL772161.1-201ENST00000439130 476 ntBASIC3.81□□□□□ -1.8
RHBDD3Q9Y3P4 UBE2V1P3-201ENST00000439651 417 ntBASIC3.81□□□□□ -1.8
RHBDD3Q9Y3P4 MTCYBP21-201ENST00000443300 1113 ntBASIC3.81□□□□□ -1.8
RHBDD3Q9Y3P4 AC073264.2-201ENST00000448886 166 ntBASIC3.81□□□□□ -1.8
RHBDD3Q9Y3P4 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC3.81□□□□□ -1.8
RHBDD3Q9Y3P4 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC3.81□□□□□ -1.8
RHBDD3Q9Y3P4 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC3.81□□□□□ -1.8
RHBDD3Q9Y3P4 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC3.81□□□□□ -1.8
RHBDD3Q9Y3P4 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC3.81□□□□□ -1.8
RHBDD3Q9Y3P4 AC020593.1-201ENST00000507399 299 ntBASIC3.81□□□□□ -1.8
RHBDD3Q9Y3P4 HMGB1P47-201ENST00000511281 589 ntBASIC3.81□□□□□ -1.8
RHBDD3Q9Y3P4 FTH1P9-201ENST00000513251 355 ntBASIC3.81□□□□□ -1.8
RHBDD3Q9Y3P4 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC3.81□□□□□ -1.8
RHBDD3Q9Y3P4 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC3.81□□□□□ -1.8
RHBDD3Q9Y3P4 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC3.81□□□□□ -1.8
RHBDD3Q9Y3P4 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.81□□□□□ -1.8
RHBDD3Q9Y3P4 AP006289.1-201ENST00000538089 277 ntBASIC3.81□□□□□ -1.8
RHBDD3Q9Y3P4 CYP4A43P-201ENST00000568156 121 ntBASIC3.81□□□□□ -1.8
RHBDD3Q9Y3P4 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC3.81□□□□□ -1.8
RHBDD3Q9Y3P4 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC3.81□□□□□ -1.8
RHBDD3Q9Y3P4 AC005255.1-201ENST00000593748 216 ntBASIC3.81□□□□□ -1.8
RHBDD3Q9Y3P4 AC068790.7-201ENST00000602347 528 ntBASIC3.81□□□□□ -1.8
RHBDD3Q9Y3P4 AP003117.1-201ENST00000602771 554 ntBASIC3.81□□□□□ -1.8
RHBDD3Q9Y3P4 LLPHP1-201ENST00000603571 367 ntBASIC3.81□□□□□ -1.8
RHBDD3Q9Y3P4 AL139395.1-201ENST00000603662 160 ntBASIC3.81□□□□□ -1.8
RHBDD3Q9Y3P4 uc_338.32-201ENST00000615087 172 ntBASIC3.81□□□□□ -1.8
RHBDD3Q9Y3P4 AC245389.2-201ENST00000616023 576 ntBASIC3.81□□□□□ -1.8
RHBDD3Q9Y3P4 AC243756.2-201ENST00000618406 463 ntBASIC3.81□□□□□ -1.8
RHBDD3Q9Y3P4 AC242843.1-201ENST00000618702 573 ntBASIC3.81□□□□□ -1.8
RHBDD3Q9Y3P4 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.81□□□□□ -1.8
RHBDD3Q9Y3P4 LGI1-209ENST00000627699 664 ntTSL 3 BASIC3.81□□□□□ -1.8
RHBDD3Q9Y3P4 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RHBDD3Q9Y3P4 AC006971.1-201ENST00000407916 4486 ntBASIC3.81□□□□□ -1.8
RHBDD3Q9Y3P4 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.81□□□□□ -1.8
RHBDD3Q9Y3P4 AC011266.1-201ENST00000624119 3569 ntBASIC3.81□□□□□ -1.8
RHBDD3Q9Y3P4 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RHBDD3Q9Y3P4 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.8□□□□□ -1.8
RHBDD3Q9Y3P4 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RHBDD3Q9Y3P4 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
RHBDD3Q9Y3P4 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
RHBDD3Q9Y3P4 OR4K15-201ENST00000305051 1216 ntBASIC3.8□□□□□ -1.8
RHBDD3Q9Y3P4 MIR448-201ENST00000362131 111 ntBASIC3.8□□□□□ -1.8
RHBDD3Q9Y3P4 MIR421-201ENST00000365696 85 ntBASIC3.8□□□□□ -1.8
RHBDD3Q9Y3P4 MIR513A2-201ENST00000385249 127 ntBASIC3.8□□□□□ -1.8
RHBDD3Q9Y3P4 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
RHBDD3Q9Y3P4 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
RHBDD3Q9Y3P4 MIR1911-201ENST00000410783 80 ntBASIC3.8□□□□□ -1.8
RHBDD3Q9Y3P4 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.8□□□□□ -1.8
RHBDD3Q9Y3P4 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC3.8□□□□□ -1.8
RHBDD3Q9Y3P4 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RHBDD3Q9Y3P4 AL512504.1-201ENST00000415494 778 ntBASIC3.8□□□□□ -1.8
RHBDD3Q9Y3P4 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.8□□□□□ -1.8
RHBDD3Q9Y3P4 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.8□□□□□ -1.8
RHBDD3Q9Y3P4 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.8□□□□□ -1.8
RHBDD3Q9Y3P4 AC069285.2-201ENST00000440210 275 ntBASIC3.8□□□□□ -1.8
RHBDD3Q9Y3P4 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RHBDD3Q9Y3P4 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC3.8□□□□□ -1.8
RHBDD3Q9Y3P4 ARL2BPP10-201ENST00000446487 531 ntBASIC3.8□□□□□ -1.8
RHBDD3Q9Y3P4 PPIAP3-201ENST00000450588 505 ntBASIC3.8□□□□□ -1.8
RHBDD3Q9Y3P4 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC3.8□□□□□ -1.8
RHBDD3Q9Y3P4 AC087385.1-201ENST00000475062 312 ntBASIC3.8□□□□□ -1.8
RHBDD3Q9Y3P4 F11-205ENST00000492972 1204 ntTSL 2 BASIC3.8□□□□□ -1.8
RHBDD3Q9Y3P4 AC092045.1-201ENST00000495716 1231 ntBASIC3.8□□□□□ -1.8
RHBDD3Q9Y3P4 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC3.8□□□□□ -1.8
RHBDD3Q9Y3P4 AC093770.1-201ENST00000511559 571 ntBASIC3.8□□□□□ -1.8
RHBDD3Q9Y3P4 RNA5SP154-201ENST00000516193 111 ntBASIC3.8□□□□□ -1.8
RHBDD3Q9Y3P4 Vault.1-201ENST00000516474 102 ntBASIC3.8□□□□□ -1.8
RHBDD3Q9Y3P4 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms