Protein–RNA interactions for Protein: Q9UH17

APOBEC3B, DNA dC->dU-editing enzyme APOBEC-3B, humanhuman

Known RBP Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3BQ9UH17 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
APOBEC3BQ9UH17 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
APOBEC3BQ9UH17 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
APOBEC3BQ9UH17 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.2□□□□□ -1.74
APOBEC3BQ9UH17 LINC01355-201ENST00000566551 5444 ntBASIC4.2□□□□□ -1.74
APOBEC3BQ9UH17 AC134882.1-201ENST00000603738 1676 ntBASIC4.2□□□□□ -1.74
APOBEC3BQ9UH17 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
APOBEC3BQ9UH17 RNA5SP388-201ENST00000362584 119 ntBASIC4.2□□□□□ -1.74
APOBEC3BQ9UH17 RNA5SP502-201ENST00000362694 119 ntBASIC4.2□□□□□ -1.74
APOBEC3BQ9UH17 RNU1-20P-201ENST00000363314 162 ntBASIC4.2□□□□□ -1.74
APOBEC3BQ9UH17 RNU1-64P-201ENST00000365443 163 ntBASIC4.2□□□□□ -1.74
APOBEC3BQ9UH17 MIR421-201ENST00000365696 85 ntBASIC4.2□□□□□ -1.74
APOBEC3BQ9UH17 RNU6-1279P-201ENST00000383917 103 ntBASIC4.2□□□□□ -1.74
APOBEC3BQ9UH17 RNU1-44P-201ENST00000384453 163 ntBASIC4.2□□□□□ -1.74
APOBEC3BQ9UH17 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC4.2□□□□□ -1.74
APOBEC3BQ9UH17 AL589655.1-201ENST00000405398 482 ntBASIC4.2□□□□□ -1.74
APOBEC3BQ9UH17 RN7SKP182-201ENST00000410772 298 ntBASIC4.2□□□□□ -1.74
APOBEC3BQ9UH17 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.2□□□□□ -1.74
APOBEC3BQ9UH17 VDAC1P9-201ENST00000412766 841 ntBASIC4.2□□□□□ -1.74
APOBEC3BQ9UH17 MTND4LP13-201ENST00000425022 298 ntBASIC4.2□□□□□ -1.74
APOBEC3BQ9UH17 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.2□□□□□ -1.74
APOBEC3BQ9UH17 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.2□□□□□ -1.74
APOBEC3BQ9UH17 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.2□□□□□ -1.74
APOBEC3BQ9UH17 MRPS33P4-201ENST00000434892 317 ntBASIC4.2□□□□□ -1.74
APOBEC3BQ9UH17 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
APOBEC3BQ9UH17 MTCO3P43-201ENST00000440974 771 ntBASIC4.2□□□□□ -1.74
APOBEC3BQ9UH17 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
APOBEC3BQ9UH17 RPS27AP15-201ENST00000447672 466 ntBASIC4.2□□□□□ -1.74
APOBEC3BQ9UH17 AC017099.1-201ENST00000448261 1028 ntBASIC4.2□□□□□ -1.74
APOBEC3BQ9UH17 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.2□□□□□ -1.74
APOBEC3BQ9UH17 AC025181.1-201ENST00000477507 416 ntBASIC4.2□□□□□ -1.74
APOBEC3BQ9UH17 S100A11P1-201ENST00000477525 312 ntBASIC4.2□□□□□ -1.74
APOBEC3BQ9UH17 DEFB109F-201ENST00000491870 277 ntBASIC4.2□□□□□ -1.74
APOBEC3BQ9UH17 PRELID3BP7-201ENST00000503606 469 ntBASIC4.2□□□□□ -1.74
APOBEC3BQ9UH17 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.2□□□□□ -1.74
APOBEC3BQ9UH17 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.2□□□□□ -1.74
APOBEC3BQ9UH17 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
APOBEC3BQ9UH17 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.2□□□□□ -1.74
APOBEC3BQ9UH17 RPL21P7-201ENST00000557463 483 ntBASIC4.2□□□□□ -1.74
APOBEC3BQ9UH17 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC4.2□□□□□ -1.74
APOBEC3BQ9UH17 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.2□□□□□ -1.74
APOBEC3BQ9UH17 AC006116.5-201ENST00000591936 559 ntBASIC4.2□□□□□ -1.74
APOBEC3BQ9UH17 HMGB1P51-201ENST00000605166 638 ntBASIC4.2□□□□□ -1.74
APOBEC3BQ9UH17 AC007546.1-201ENST00000619452 559 ntBASIC4.2□□□□□ -1.74
APOBEC3BQ9UH17 AC006213.5-201ENST00000619673 288 ntBASIC4.2□□□□□ -1.74
APOBEC3BQ9UH17 AC073592.7-201ENST00000623659 507 ntBASIC4.2□□□□□ -1.74
APOBEC3BQ9UH17 AC112484.5-201ENST00000624189 228 ntBASIC4.2□□□□□ -1.74
APOBEC3BQ9UH17 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.2□□□□□ -1.74
APOBEC3BQ9UH17 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
APOBEC3BQ9UH17 AC009229.4-201ENST00000623854 1947 ntBASIC4.2□□□□□ -1.74
APOBEC3BQ9UH17 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.2□□□□□ -1.74
APOBEC3BQ9UH17 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
APOBEC3BQ9UH17 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
APOBEC3BQ9UH17 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
APOBEC3BQ9UH17 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.19□□□□□ -1.74
APOBEC3BQ9UH17 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
APOBEC3BQ9UH17 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.19□□□□□ -1.74
APOBEC3BQ9UH17 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
APOBEC3BQ9UH17 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
APOBEC3BQ9UH17 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
APOBEC3BQ9UH17 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.19□□□□□ -1.74
APOBEC3BQ9UH17 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
APOBEC3BQ9UH17 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.19□□□□□ -1.74
APOBEC3BQ9UH17 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
APOBEC3BQ9UH17 SNORA37-201ENST00000384504 129 ntBASIC4.19□□□□□ -1.74
APOBEC3BQ9UH17 RN7SKP27-201ENST00000410684 333 ntBASIC4.19□□□□□ -1.74
APOBEC3BQ9UH17 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.19□□□□□ -1.74
APOBEC3BQ9UH17 AC108032.1-201ENST00000416706 207 ntBASIC4.19□□□□□ -1.74
APOBEC3BQ9UH17 AL445528.1-201ENST00000426330 420 ntBASIC4.19□□□□□ -1.74
APOBEC3BQ9UH17 MRPL50P1-201ENST00000431951 384 ntBASIC4.19□□□□□ -1.74
APOBEC3BQ9UH17 AC122718.1-201ENST00000439448 744 ntBASIC4.19□□□□□ -1.74
APOBEC3BQ9UH17 AC006326.1-201ENST00000445465 787 ntBASIC4.19□□□□□ -1.74
APOBEC3BQ9UH17 RAB28P3-201ENST00000448325 597 ntBASIC4.19□□□□□ -1.74
APOBEC3BQ9UH17 AL121877.1-201ENST00000453704 622 ntBASIC4.19□□□□□ -1.74
APOBEC3BQ9UH17 RPL23AP81-201ENST00000455252 467 ntBASIC4.19□□□□□ -1.74
APOBEC3BQ9UH17 FAM133DP-201ENST00000464802 691 ntBASIC4.19□□□□□ -1.74
APOBEC3BQ9UH17 RPL7P22-201ENST00000466005 733 ntBASIC4.19□□□□□ -1.74
APOBEC3BQ9UH17 RPL23AP65-201ENST00000475608 468 ntBASIC4.19□□□□□ -1.74
APOBEC3BQ9UH17 AL132838.2-201ENST00000492041 314 ntBASIC4.19□□□□□ -1.74
APOBEC3BQ9UH17 PCNAP1-201ENST00000505363 709 ntBASIC4.19□□□□□ -1.74
APOBEC3BQ9UH17 COL6A4P2-205ENST00000509855 506 ntBASIC4.19□□□□□ -1.74
APOBEC3BQ9UH17 AC099522.1-202ENST00000514718 367 ntBASIC4.19□□□□□ -1.74
APOBEC3BQ9UH17 RNU6-760P-201ENST00000516078 97 ntBASIC4.19□□□□□ -1.74
APOBEC3BQ9UH17 RNA5SP73-201ENST00000516744 108 ntBASIC4.19□□□□□ -1.74
APOBEC3BQ9UH17 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.19□□□□□ -1.74
APOBEC3BQ9UH17 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.19□□□□□ -1.74
APOBEC3BQ9UH17 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
APOBEC3BQ9UH17 AC090151.1-201ENST00000520784 730 ntBASIC4.19□□□□□ -1.74
APOBEC3BQ9UH17 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.19□□□□□ -1.74
APOBEC3BQ9UH17 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
APOBEC3BQ9UH17 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.19□□□□□ -1.74
APOBEC3BQ9UH17 AC092868.3-201ENST00000560515 784 ntBASIC4.19□□□□□ -1.74
APOBEC3BQ9UH17 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.19□□□□□ -1.74
APOBEC3BQ9UH17 AC106785.1-201ENST00000565935 262 ntBASIC4.19□□□□□ -1.74
APOBEC3BQ9UH17 RPL23AP97-201ENST00000568955 471 ntBASIC4.19□□□□□ -1.74
APOBEC3BQ9UH17 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.19□□□□□ -1.74
APOBEC3BQ9UH17 MIR1254-2-201ENST00000579553 63 ntBASIC4.19□□□□□ -1.74
APOBEC3BQ9UH17 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.19□□□□□ -1.74
APOBEC3BQ9UH17 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
APOBEC3BQ9UH17 AC009237.17-201ENST00000618111 748 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms