Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CLIP2Q9UDT6 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CLIP2Q9UDT6 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
CLIP2Q9UDT6 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
CLIP2Q9UDT6 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
CLIP2Q9UDT6 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC5.02□□□□□ -1.61
CLIP2Q9UDT6 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CLIP2Q9UDT6 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.01□□□□□ -1.61
CLIP2Q9UDT6 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CLIP2Q9UDT6 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
CLIP2Q9UDT6 AL445437.1-201ENST00000623157 3087 ntBASIC5.01□□□□□ -1.61
CLIP2Q9UDT6 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.01□□□□□ -1.61
CLIP2Q9UDT6 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.01□□□□□ -1.61
CLIP2Q9UDT6 SNORD74.4-201ENST00000364129 80 ntBASIC5.01□□□□□ -1.61
CLIP2Q9UDT6 SNORD65-201ENST00000391079 73 ntBASIC5.01□□□□□ -1.61
CLIP2Q9UDT6 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC5.01□□□□□ -1.61
CLIP2Q9UDT6 RNA5SP317-201ENST00000410176 116 ntBASIC5.01□□□□□ -1.61
CLIP2Q9UDT6 MIR1911-201ENST00000410783 80 ntBASIC5.01□□□□□ -1.61
CLIP2Q9UDT6 RNA5SP311-201ENST00000411290 116 ntBASIC5.01□□□□□ -1.61
CLIP2Q9UDT6 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.01□□□□□ -1.61
CLIP2Q9UDT6 MTATP6P19-201ENST00000413797 659 ntBASIC5.01□□□□□ -1.61
CLIP2Q9UDT6 SLC4A1APP1-201ENST00000419995 602 ntBASIC5.01□□□□□ -1.61
CLIP2Q9UDT6 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.01□□□□□ -1.61
CLIP2Q9UDT6 EIF1P3-201ENST00000423841 334 ntBASIC5.01□□□□□ -1.61
CLIP2Q9UDT6 COX6B1P7-201ENST00000430845 235 ntBASIC5.01□□□□□ -1.61
CLIP2Q9UDT6 ARL5AP3-201ENST00000439327 386 ntBASIC5.01□□□□□ -1.61
CLIP2Q9UDT6 AL157884.3-201ENST00000448273 1184 ntBASIC5.01□□□□□ -1.61
CLIP2Q9UDT6 AC133473.1-201ENST00000455173 299 ntBASIC5.01□□□□□ -1.61
CLIP2Q9UDT6 RPL23AP81-201ENST00000455252 467 ntBASIC5.01□□□□□ -1.61
CLIP2Q9UDT6 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
CLIP2Q9UDT6 RNA5SP315-201ENST00000516340 116 ntBASIC5.01□□□□□ -1.61
CLIP2Q9UDT6 RNA5SP312-201ENST00000517068 116 ntBASIC5.01□□□□□ -1.61
CLIP2Q9UDT6 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC5.01□□□□□ -1.61
CLIP2Q9UDT6 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC5.01□□□□□ -1.61
CLIP2Q9UDT6 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC5.01□□□□□ -1.61
CLIP2Q9UDT6 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.01□□□□□ -1.61
CLIP2Q9UDT6 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.01□□□□□ -1.61
CLIP2Q9UDT6 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC5.01□□□□□ -1.61
CLIP2Q9UDT6 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CLIP2Q9UDT6 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CLIP2Q9UDT6 AL139395.1-201ENST00000603662 160 ntBASIC5.01□□□□□ -1.61
CLIP2Q9UDT6 FAM27D1-201ENST00000612308 341 ntBASIC5.01□□□□□ -1.61
CLIP2Q9UDT6 SMCR2_2.1-201ENST00000619783 161 ntBASIC5.01□□□□□ -1.61
CLIP2Q9UDT6 RNA5SP196-201ENST00000625967 102 ntBASIC5.01□□□□□ -1.61
CLIP2Q9UDT6 MIR492-201ENST00000638676 116 ntBASIC5.01□□□□□ -1.61
CLIP2Q9UDT6 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.01□□□□□ -1.61
CLIP2Q9UDT6 AC092079.1-201ENST00000558620 1985 ntBASIC5.01□□□□□ -1.61
CLIP2Q9UDT6 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CLIP2Q9UDT6 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CLIP2Q9UDT6 AC011266.1-201ENST00000624119 3569 ntBASIC5.01□□□□□ -1.61
CLIP2Q9UDT6 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CLIP2Q9UDT6 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC5□□□□□ -1.61
CLIP2Q9UDT6 CASC19-284ENST00000642142 1868 ntBASIC5□□□□□ -1.61
CLIP2Q9UDT6 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC5□□□□□ -1.61
CLIP2Q9UDT6 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CLIP2Q9UDT6 PHKBP1-201ENST00000450951 1951 ntBASIC5□□□□□ -1.61
CLIP2Q9UDT6 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC5□□□□□ -1.61
CLIP2Q9UDT6 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC5□□□□□ -1.61
CLIP2Q9UDT6 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5□□□□□ -1.61
CLIP2Q9UDT6 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC5□□□□□ -1.61
CLIP2Q9UDT6 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC5□□□□□ -1.61
CLIP2Q9UDT6 GCNT6-201ENST00000379591 934 ntBASIC5□□□□□ -1.61
CLIP2Q9UDT6 AL022722.2-201ENST00000402519 180 ntBASIC5□□□□□ -1.61
CLIP2Q9UDT6 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5□□□□□ -1.61
CLIP2Q9UDT6 AC004552.1-201ENST00000419089 348 ntBASIC5□□□□□ -1.61
CLIP2Q9UDT6 MTCYBP7-201ENST00000419540 1134 ntBASIC5□□□□□ -1.61
CLIP2Q9UDT6 OR6K4P-201ENST00000423179 955 ntBASIC5□□□□□ -1.61
CLIP2Q9UDT6 COX6CP15-201ENST00000426313 211 ntBASIC5□□□□□ -1.61
CLIP2Q9UDT6 BTF3P10-201ENST00000433415 495 ntBASIC5□□□□□ -1.61
CLIP2Q9UDT6 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5□□□□□ -1.61
CLIP2Q9UDT6 AL353748.1-201ENST00000440753 474 ntBASIC5□□□□□ -1.61
CLIP2Q9UDT6 EEF1A1P1-201ENST00000447052 739 ntBASIC5□□□□□ -1.61
CLIP2Q9UDT6 BUD31P2-201ENST00000449374 300 ntBASIC5□□□□□ -1.61
CLIP2Q9UDT6 RNU6-775P-201ENST00000459318 96 ntBASIC5□□□□□ -1.61
CLIP2Q9UDT6 RPS26P3-201ENST00000470205 348 ntBASIC5□□□□□ -1.61
CLIP2Q9UDT6 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5□□□□□ -1.61
CLIP2Q9UDT6 AC090543.2-201ENST00000483963 348 ntBASIC5□□□□□ -1.61
CLIP2Q9UDT6 AC004057.1-201ENST00000485827 348 ntBASIC5□□□□□ -1.61
CLIP2Q9UDT6 AC025445.1-201ENST00000502728 300 ntBASIC5□□□□□ -1.61
CLIP2Q9UDT6 AL592156.1-201ENST00000508758 304 ntBASIC5□□□□□ -1.61
CLIP2Q9UDT6 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC5□□□□□ -1.61
CLIP2Q9UDT6 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5□□□□□ -1.61
CLIP2Q9UDT6 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC5□□□□□ -1.61
CLIP2Q9UDT6 OR7E10P-201ENST00000526420 991 ntBASIC5□□□□□ -1.61
CLIP2Q9UDT6 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5□□□□□ -1.61
CLIP2Q9UDT6 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC5□□□□□ -1.61
CLIP2Q9UDT6 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC5□□□□□ -1.61
CLIP2Q9UDT6 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC5□□□□□ -1.61
CLIP2Q9UDT6 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC5□□□□□ -1.61
CLIP2Q9UDT6 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5□□□□□ -1.61
CLIP2Q9UDT6 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5□□□□□ -1.61
CLIP2Q9UDT6 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC5□□□□□ -1.61
CLIP2Q9UDT6 AC005034.4-201ENST00000603612 899 ntBASIC5□□□□□ -1.61
CLIP2Q9UDT6 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5□□□□□ -1.61
CLIP2Q9UDT6 AC090506.2-201ENST00000624521 419 ntBASIC5□□□□□ -1.61
CLIP2Q9UDT6 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5□□□□□ -1.61
CLIP2Q9UDT6 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC5□□□□□ -1.61
CLIP2Q9UDT6 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5□□□□□ -1.61
CLIP2Q9UDT6 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC5□□□□□ -1.61
CLIP2Q9UDT6 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms