Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 AC112484.5-201ENST00000624189 228 ntBASIC5.08□□□□□ -1.6
HMG20BQ9P0W2 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HMG20BQ9P0W2 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
HMG20BQ9P0W2 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HMG20BQ9P0W2 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
HMG20BQ9P0W2 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HMG20BQ9P0W2 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.07□□□□□ -1.6
HMG20BQ9P0W2 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.07□□□□□ -1.6
HMG20BQ9P0W2 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HMG20BQ9P0W2 RNA5SP283-201ENST00000365604 119 ntBASIC5.07□□□□□ -1.6
HMG20BQ9P0W2 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HMG20BQ9P0W2 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC5.07□□□□□ -1.6
HMG20BQ9P0W2 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.07□□□□□ -1.6
HMG20BQ9P0W2 CASP3P1-201ENST00000446037 609 ntBASIC5.07□□□□□ -1.6
HMG20BQ9P0W2 RPL5P32-201ENST00000454085 879 ntBASIC5.07□□□□□ -1.6
HMG20BQ9P0W2 HMGB1P47-201ENST00000511281 589 ntBASIC5.07□□□□□ -1.6
HMG20BQ9P0W2 HMGB1P19-201ENST00000517578 577 ntBASIC5.07□□□□□ -1.6
HMG20BQ9P0W2 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HMG20BQ9P0W2 NPM1P35-201ENST00000533043 868 ntBASIC5.07□□□□□ -1.6
HMG20BQ9P0W2 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC5.07□□□□□ -1.6
HMG20BQ9P0W2 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.07□□□□□ -1.6
HMG20BQ9P0W2 AC068020.1-201ENST00000594215 661 ntBASIC5.07□□□□□ -1.6
HMG20BQ9P0W2 AC245128.3-201ENST00000594721 748 ntBASIC5.07□□□□□ -1.6
HMG20BQ9P0W2 VN1R85P-201ENST00000601587 426 ntBASIC5.07□□□□□ -1.6
HMG20BQ9P0W2 AC024941.1-201ENST00000612250 334 ntBASIC5.07□□□□□ -1.6
HMG20BQ9P0W2 AC145207.9-201ENST00000623802 325 ntBASIC5.07□□□□□ -1.6
HMG20BQ9P0W2 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC5.07□□□□□ -1.6
HMG20BQ9P0W2 RLIMP1-201ENST00000339626 1680 ntBASIC5.07□□□□□ -1.6
HMG20BQ9P0W2 AC021242.1-201ENST00000507315 2035 ntBASIC5.07□□□□□ -1.6
HMG20BQ9P0W2 AC010329.2-201ENST00000595195 2737 ntBASIC5.07□□□□□ -1.6
HMG20BQ9P0W2 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HMG20BQ9P0W2 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC5.07□□□□□ -1.6
HMG20BQ9P0W2 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
HMG20BQ9P0W2 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HMG20BQ9P0W2 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HMG20BQ9P0W2 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC5.06□□□□□ -1.6
HMG20BQ9P0W2 AC093535.2-201ENST00000624769 2326 ntBASIC5.06□□□□□ -1.6
HMG20BQ9P0W2 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
HMG20BQ9P0W2 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC5.06□□□□□ -1.6
HMG20BQ9P0W2 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HMG20BQ9P0W2 SNORA37-201ENST00000384504 129 ntBASIC5.06□□□□□ -1.6
HMG20BQ9P0W2 PPIAP31-201ENST00000405422 495 ntBASIC5.06□□□□□ -1.6
HMG20BQ9P0W2 AL117339.2-201ENST00000430475 180 ntBASIC5.06□□□□□ -1.6
HMG20BQ9P0W2 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.06□□□□□ -1.6
HMG20BQ9P0W2 TMX2P1-201ENST00000436507 708 ntBASIC5.06□□□□□ -1.6
HMG20BQ9P0W2 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.06□□□□□ -1.6
HMG20BQ9P0W2 AL353898.1-201ENST00000444055 238 ntBASIC5.06□□□□□ -1.6
HMG20BQ9P0W2 RAD23BP3-201ENST00000454157 1152 ntBASIC5.06□□□□□ -1.6
HMG20BQ9P0W2 AP002345.1-201ENST00000456493 928 ntBASIC5.06□□□□□ -1.6
HMG20BQ9P0W2 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.06□□□□□ -1.6
HMG20BQ9P0W2 AL132838.2-201ENST00000492041 314 ntBASIC5.06□□□□□ -1.6
HMG20BQ9P0W2 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.06□□□□□ -1.6
HMG20BQ9P0W2 RN7SL604P-201ENST00000492589 296 ntBASIC5.06□□□□□ -1.6
HMG20BQ9P0W2 AC021087.2-201ENST00000504656 1203 ntBASIC5.06□□□□□ -1.6
HMG20BQ9P0W2 FABP5P6-201ENST00000510588 409 ntBASIC5.06□□□□□ -1.6
HMG20BQ9P0W2 AC034244.2-201ENST00000514668 858 ntBASIC5.06□□□□□ -1.6
HMG20BQ9P0W2 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
HMG20BQ9P0W2 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC5.06□□□□□ -1.6
HMG20BQ9P0W2 BNIP3P5-201ENST00000562290 498 ntBASIC5.06□□□□□ -1.6
HMG20BQ9P0W2 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC5.06□□□□□ -1.6
HMG20BQ9P0W2 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.06□□□□□ -1.6
HMG20BQ9P0W2 AC079791.1-201ENST00000605356 973 ntBASIC5.06□□□□□ -1.6
HMG20BQ9P0W2 MKKS-203ENST00000609375 882 ntTSL 2 BASIC5.06□□□□□ -1.6
HMG20BQ9P0W2 AC016911.1-201ENST00000613297 452 ntBASIC5.06□□□□□ -1.6
HMG20BQ9P0W2 MIR7702-201ENST00000621931 59 ntBASIC5.06□□□□□ -1.6
HMG20BQ9P0W2 AC015908.5-201ENST00000623289 343 ntBASIC5.06□□□□□ -1.6
HMG20BQ9P0W2 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.06□□□□□ -1.6
HMG20BQ9P0W2 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HMG20BQ9P0W2 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HMG20BQ9P0W2 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HMG20BQ9P0W2 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC5.06□□□□□ -1.6
HMG20BQ9P0W2 BX005019.1-201ENST00000561881 1810 ntBASIC5.06□□□□□ -1.6
HMG20BQ9P0W2 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
HMG20BQ9P0W2 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HMG20BQ9P0W2 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC5.06□□□□□ -1.6
HMG20BQ9P0W2 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.06□□□□□ -1.6
HMG20BQ9P0W2 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
HMG20BQ9P0W2 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.06□□□□□ -1.6
HMG20BQ9P0W2 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HMG20BQ9P0W2 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
HMG20BQ9P0W2 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HMG20BQ9P0W2 AC104118.1-201ENST00000607625 1589 ntBASIC5.05□□□□□ -1.6
HMG20BQ9P0W2 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC5.05□□□□□ -1.6
HMG20BQ9P0W2 OR11H4-201ENST00000315409 1082 ntBASIC5.05□□□□□ -1.6
HMG20BQ9P0W2 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HMG20BQ9P0W2 ENSAP1-201ENST00000392855 326 ntBASIC5.05□□□□□ -1.6
HMG20BQ9P0W2 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.05□□□□□ -1.6
HMG20BQ9P0W2 AL590609.2-201ENST00000421430 368 ntBASIC5.05□□□□□ -1.6
HMG20BQ9P0W2 RPL23AP46-201ENST00000438548 490 ntBASIC5.05□□□□□ -1.6
HMG20BQ9P0W2 RPL23AP89-201ENST00000439324 255 ntBASIC5.05□□□□□ -1.6
HMG20BQ9P0W2 AC006326.1-201ENST00000445465 787 ntBASIC5.05□□□□□ -1.6
HMG20BQ9P0W2 AL627224.1-201ENST00000448334 444 ntBASIC5.05□□□□□ -1.6
HMG20BQ9P0W2 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC5.05□□□□□ -1.6
HMG20BQ9P0W2 NDUFAF4P3-201ENST00000456468 525 ntBASIC5.05□□□□□ -1.6
HMG20BQ9P0W2 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC5.05□□□□□ -1.6
HMG20BQ9P0W2 AC021146.7-201ENST00000509604 775 ntBASIC5.05□□□□□ -1.6
HMG20BQ9P0W2 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC5.05□□□□□ -1.6
HMG20BQ9P0W2 TRAPPC2P2-201ENST00000517589 409 ntBASIC5.05□□□□□ -1.6
HMG20BQ9P0W2 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.05□□□□□ -1.6
HMG20BQ9P0W2 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms