Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 SUMO1P1-201ENST00000497904 306 ntBASIC4.59□□□□□ -1.67
HPS4Q9NQG7 AC010627.1-201ENST00000503819 1294 ntBASIC4.59□□□□□ -1.67
HPS4Q9NQG7 HMGB3P13-201ENST00000511263 607 ntBASIC4.59□□□□□ -1.67
HPS4Q9NQG7 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.59□□□□□ -1.67
HPS4Q9NQG7 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.59□□□□□ -1.67
HPS4Q9NQG7 DEFB109D-201ENST00000529497 240 ntBASIC4.59□□□□□ -1.67
HPS4Q9NQG7 AC023158.1-201ENST00000561632 1025 ntBASIC4.59□□□□□ -1.67
HPS4Q9NQG7 AC015912.2-201ENST00000571053 181 ntBASIC4.59□□□□□ -1.67
HPS4Q9NQG7 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.59□□□□□ -1.67
HPS4Q9NQG7 AL354696.1-201ENST00000614652 497 ntBASIC4.59□□□□□ -1.67
HPS4Q9NQG7 AL158196.1-201ENST00000616786 434 ntBASIC4.59□□□□□ -1.67
HPS4Q9NQG7 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.59□□□□□ -1.67
HPS4Q9NQG7 AC067852.7-201ENST00000623270 535 ntBASIC4.59□□□□□ -1.67
HPS4Q9NQG7 AP003497.2-201ENST00000624220 967 ntBASIC4.59□□□□□ -1.67
HPS4Q9NQG7 RNA5SP196-201ENST00000625967 102 ntBASIC4.59□□□□□ -1.67
HPS4Q9NQG7 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.59□□□□□ -1.67
HPS4Q9NQG7 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.59□□□□□ -1.67
HPS4Q9NQG7 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.59□□□□□ -1.67
HPS4Q9NQG7 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
HPS4Q9NQG7 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
HPS4Q9NQG7 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.68
HPS4Q9NQG7 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HPS4Q9NQG7 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
HPS4Q9NQG7 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
HPS4Q9NQG7 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HPS4Q9NQG7 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
HPS4Q9NQG7 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HPS4Q9NQG7 RNA5SP317-201ENST00000410176 116 ntBASIC4.58□□□□□ -1.68
HPS4Q9NQG7 RNA5SP311-201ENST00000411290 116 ntBASIC4.58□□□□□ -1.68
HPS4Q9NQG7 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.58□□□□□ -1.68
HPS4Q9NQG7 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.58□□□□□ -1.68
HPS4Q9NQG7 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HPS4Q9NQG7 AC073069.1-201ENST00000428657 441 ntBASIC4.58□□□□□ -1.68
HPS4Q9NQG7 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.58□□□□□ -1.68
HPS4Q9NQG7 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.58□□□□□ -1.68
HPS4Q9NQG7 PPIAP13-201ENST00000434706 478 ntBASIC4.58□□□□□ -1.68
HPS4Q9NQG7 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.58□□□□□ -1.68
HPS4Q9NQG7 MTND5P8-201ENST00000449817 1083 ntBASIC4.58□□□□□ -1.68
HPS4Q9NQG7 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.58□□□□□ -1.68
HPS4Q9NQG7 AC092691.2-201ENST00000461787 803 ntBASIC4.58□□□□□ -1.68
HPS4Q9NQG7 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HPS4Q9NQG7 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.58□□□□□ -1.68
HPS4Q9NQG7 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.58□□□□□ -1.68
HPS4Q9NQG7 MTCO1P31-201ENST00000506355 492 ntBASIC4.58□□□□□ -1.68
HPS4Q9NQG7 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC4.58□□□□□ -1.68
HPS4Q9NQG7 RNA5SP315-201ENST00000516340 116 ntBASIC4.58□□□□□ -1.68
HPS4Q9NQG7 RNA5SP312-201ENST00000517068 116 ntBASIC4.58□□□□□ -1.68
HPS4Q9NQG7 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC4.58□□□□□ -1.68
HPS4Q9NQG7 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC4.58□□□□□ -1.68
HPS4Q9NQG7 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
HPS4Q9NQG7 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HPS4Q9NQG7 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.58□□□□□ -1.68
HPS4Q9NQG7 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.58□□□□□ -1.68
HPS4Q9NQG7 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.58□□□□□ -1.68
HPS4Q9NQG7 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.58□□□□□ -1.68
HPS4Q9NQG7 AL591034.3-201ENST00000605511 685 ntBASIC4.58□□□□□ -1.68
HPS4Q9NQG7 CR589904.2-201ENST00000612533 440 ntBASIC4.58□□□□□ -1.68
HPS4Q9NQG7 AC005086.4-201ENST00000623065 213 ntBASIC4.58□□□□□ -1.68
HPS4Q9NQG7 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.58□□□□□ -1.68
HPS4Q9NQG7 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
HPS4Q9NQG7 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HPS4Q9NQG7 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
HPS4Q9NQG7 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HPS4Q9NQG7 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.57□□□□□ -1.68
HPS4Q9NQG7 AC005261.4-201ENST00000600047 1385 ntBASIC4.57□□□□□ -1.68
HPS4Q9NQG7 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HPS4Q9NQG7 RNU6-1279P-201ENST00000383917 103 ntBASIC4.57□□□□□ -1.68
HPS4Q9NQG7 RNU1-13P-201ENST00000384499 162 ntBASIC4.57□□□□□ -1.68
HPS4Q9NQG7 HDGFP1-201ENST00000405943 252 ntBASIC4.57□□□□□ -1.68
HPS4Q9NQG7 Z86062.1-201ENST00000406773 777 ntBASIC4.57□□□□□ -1.68
HPS4Q9NQG7 AC004448.2-201ENST00000422360 586 ntBASIC4.57□□□□□ -1.68
HPS4Q9NQG7 RPL21P43-201ENST00000425440 472 ntBASIC4.57□□□□□ -1.68
HPS4Q9NQG7 MTND4LP7-201ENST00000431728 294 ntBASIC4.57□□□□□ -1.68
HPS4Q9NQG7 ZFAND6P1-201ENST00000434138 605 ntBASIC4.57□□□□□ -1.68
HPS4Q9NQG7 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.57□□□□□ -1.68
HPS4Q9NQG7 AC023512.1-201ENST00000444513 499 ntBASIC4.57□□□□□ -1.68
HPS4Q9NQG7 AC239367.2-201ENST00000447309 705 ntBASIC4.57□□□□□ -1.68
HPS4Q9NQG7 AC012671.1-201ENST00000451912 203 ntBASIC4.57□□□□□ -1.68
HPS4Q9NQG7 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.57□□□□□ -1.68
HPS4Q9NQG7 MTND6P6-201ENST00000478031 263 ntBASIC4.57□□□□□ -1.68
HPS4Q9NQG7 RPL23AP37-201ENST00000479658 549 ntBASIC4.57□□□□□ -1.68
HPS4Q9NQG7 AC108475.1-201ENST00000507880 950 ntBASIC4.57□□□□□ -1.68
HPS4Q9NQG7 PARP4P3-201ENST00000510265 317 ntBASIC4.57□□□□□ -1.68
HPS4Q9NQG7 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC4.57□□□□□ -1.68
HPS4Q9NQG7 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.57□□□□□ -1.68
HPS4Q9NQG7 AC108120.2-201ENST00000512973 294 ntBASIC4.57□□□□□ -1.68
HPS4Q9NQG7 AC108471.1-201ENST00000513977 287 ntBASIC4.57□□□□□ -1.68
HPS4Q9NQG7 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.57□□□□□ -1.68
HPS4Q9NQG7 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HPS4Q9NQG7 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.57□□□□□ -1.68
HPS4Q9NQG7 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.57□□□□□ -1.68
HPS4Q9NQG7 ADAD1P2-201ENST00000588476 646 ntBASIC4.57□□□□□ -1.68
HPS4Q9NQG7 AC242628.1-201ENST00000606810 391 ntBASIC4.57□□□□□ -1.68
HPS4Q9NQG7 AL355802.4-201ENST00000607635 548 ntBASIC4.57□□□□□ -1.68
HPS4Q9NQG7 uc_338.13-201ENST00000618243 179 ntBASIC4.57□□□□□ -1.68
HPS4Q9NQG7 AL161637.1-201ENST00000622380 412 ntBASIC4.57□□□□□ -1.68
HPS4Q9NQG7 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.57□□□□□ -1.68
HPS4Q9NQG7 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HPS4Q9NQG7 AL355852.1-201ENST00000454081 1771 ntBASIC4.57□□□□□ -1.68
HPS4Q9NQG7 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms