Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
SIX2Q9NPC8 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
SIX2Q9NPC8 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
SIX2Q9NPC8 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SIX2Q9NPC8 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
SIX2Q9NPC8 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SIX2Q9NPC8 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
SIX2Q9NPC8 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.53□□□□□ -1.68
SIX2Q9NPC8 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
SIX2Q9NPC8 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SIX2Q9NPC8 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.53□□□□□ -1.68
SIX2Q9NPC8 RNU6-796P-201ENST00000391086 107 ntBASIC4.53□□□□□ -1.68
SIX2Q9NPC8 MIR1179-201ENST00000408703 91 ntBASIC4.53□□□□□ -1.68
SIX2Q9NPC8 AP000357.1-201ENST00000409926 1165 ntBASIC4.53□□□□□ -1.68
SIX2Q9NPC8 RNU6-584P-201ENST00000410350 95 ntBASIC4.53□□□□□ -1.68
SIX2Q9NPC8 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.53□□□□□ -1.68
SIX2Q9NPC8 RPL6P29-201ENST00000414863 865 ntBASIC4.53□□□□□ -1.68
SIX2Q9NPC8 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.53□□□□□ -1.68
SIX2Q9NPC8 AC073310.1-201ENST00000423226 1033 ntBASIC4.53□□□□□ -1.68
SIX2Q9NPC8 MTCO2P17-201ENST00000424336 677 ntBASIC4.53□□□□□ -1.68
SIX2Q9NPC8 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC4.53□□□□□ -1.68
SIX2Q9NPC8 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.53□□□□□ -1.68
SIX2Q9NPC8 CNOT7P1-201ENST00000429006 852 ntBASIC4.53□□□□□ -1.68
SIX2Q9NPC8 AC092447.2-201ENST00000435487 669 ntBASIC4.53□□□□□ -1.68
SIX2Q9NPC8 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.53□□□□□ -1.68
SIX2Q9NPC8 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
SIX2Q9NPC8 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.53□□□□□ -1.68
SIX2Q9NPC8 NDUFA12P1-201ENST00000455914 406 ntBASIC4.53□□□□□ -1.68
SIX2Q9NPC8 RPL5P13-201ENST00000462840 709 ntBASIC4.53□□□□□ -1.68
SIX2Q9NPC8 RPS29P22-201ENST00000472363 168 ntBASIC4.53□□□□□ -1.68
SIX2Q9NPC8 CYCSP20-201ENST00000473154 315 ntBASIC4.53□□□□□ -1.68
SIX2Q9NPC8 RPS29P19-201ENST00000479709 171 ntBASIC4.53□□□□□ -1.68
SIX2Q9NPC8 AC041039.1-201ENST00000485656 536 ntBASIC4.53□□□□□ -1.68
SIX2Q9NPC8 RPL35P6-201ENST00000490024 372 ntBASIC4.53□□□□□ -1.68
SIX2Q9NPC8 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.53□□□□□ -1.68
SIX2Q9NPC8 AC093824.1-201ENST00000508796 343 ntBASIC4.53□□□□□ -1.68
SIX2Q9NPC8 OR51K1P-201ENST00000510214 950 ntBASIC4.53□□□□□ -1.68
SIX2Q9NPC8 AC008958.1-201ENST00000511047 682 ntBASIC4.53□□□□□ -1.68
SIX2Q9NPC8 RNA5SP154-201ENST00000516193 111 ntBASIC4.53□□□□□ -1.68
SIX2Q9NPC8 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.53□□□□□ -1.68
SIX2Q9NPC8 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.53□□□□□ -1.68
SIX2Q9NPC8 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.53□□□□□ -1.68
SIX2Q9NPC8 AC063950.1-201ENST00000552036 308 ntBASIC4.53□□□□□ -1.68
SIX2Q9NPC8 AC090666.1-201ENST00000578241 445 ntBASIC4.53□□□□□ -1.68
SIX2Q9NPC8 RN7SL339P-201ENST00000580597 296 ntBASIC4.53□□□□□ -1.68
SIX2Q9NPC8 FAM106CP-201ENST00000582212 507 ntBASIC4.53□□□□□ -1.68
SIX2Q9NPC8 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.53□□□□□ -1.68
SIX2Q9NPC8 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SIX2Q9NPC8 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.53□□□□□ -1.68
SIX2Q9NPC8 AC012603.1-201ENST00000606424 528 ntBASIC4.53□□□□□ -1.68
SIX2Q9NPC8 AL121873.1-201ENST00000616013 524 ntBASIC4.53□□□□□ -1.68
SIX2Q9NPC8 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.53□□□□□ -1.68
SIX2Q9NPC8 AC241377.1-201ENST00000619797 406 ntBASIC4.53□□□□□ -1.68
SIX2Q9NPC8 RPL23AP61-201ENST00000623642 466 ntBASIC4.53□□□□□ -1.68
SIX2Q9NPC8 AC093875.1-201ENST00000623688 504 ntBASIC4.53□□□□□ -1.68
SIX2Q9NPC8 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.53□□□□□ -1.68
SIX2Q9NPC8 MTND5P23-201ENST00000430812 1655 ntBASIC4.53□□□□□ -1.68
SIX2Q9NPC8 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SIX2Q9NPC8 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
SIX2Q9NPC8 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.53□□□□□ -1.68
SIX2Q9NPC8 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.53□□□□□ -1.68
SIX2Q9NPC8 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
SIX2Q9NPC8 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.53□□□□□ -1.68
SIX2Q9NPC8 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.53□□□□□ -1.68
SIX2Q9NPC8 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
SIX2Q9NPC8 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.69
SIX2Q9NPC8 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.53□□□□□ -1.69
SIX2Q9NPC8 AC019072.1-201ENST00000604535 1551 ntBASIC4.53□□□□□ -1.69
SIX2Q9NPC8 BTBD10P1-201ENST00000549824 1352 ntBASIC4.53□□□□□ -1.69
SIX2Q9NPC8 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SIX2Q9NPC8 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.52□□□□□ -1.69
SIX2Q9NPC8 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
SIX2Q9NPC8 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
SIX2Q9NPC8 AC011503.2-201ENST00000594230 1500 ntBASIC4.52□□□□□ -1.69
SIX2Q9NPC8 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SIX2Q9NPC8 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SIX2Q9NPC8 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SIX2Q9NPC8 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
SIX2Q9NPC8 RNU6-354P-201ENST00000383862 107 ntBASIC4.52□□□□□ -1.69
SIX2Q9NPC8 RNU6-610P-201ENST00000384264 107 ntBASIC4.52□□□□□ -1.69
SIX2Q9NPC8 MIR585-201ENST00000384887 94 ntBASIC4.52□□□□□ -1.69
SIX2Q9NPC8 RNA5SP105-201ENST00000391123 113 ntBASIC4.52□□□□□ -1.69
SIX2Q9NPC8 RPL22P22-201ENST00000395439 379 ntBASIC4.52□□□□□ -1.69
SIX2Q9NPC8 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.52□□□□□ -1.69
SIX2Q9NPC8 AL158825.1-201ENST00000414735 521 ntBASIC4.52□□□□□ -1.69
SIX2Q9NPC8 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC4.52□□□□□ -1.69
SIX2Q9NPC8 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.52□□□□□ -1.69
SIX2Q9NPC8 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC4.52□□□□□ -1.69
SIX2Q9NPC8 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC4.52□□□□□ -1.69
SIX2Q9NPC8 CBX1P1-201ENST00000440184 427 ntBASIC4.52□□□□□ -1.69
SIX2Q9NPC8 AC073587.1-201ENST00000447093 876 ntBASIC4.52□□□□□ -1.69
SIX2Q9NPC8 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.52□□□□□ -1.69
SIX2Q9NPC8 AL157827.1-201ENST00000447622 132 ntBASIC4.52□□□□□ -1.69
SIX2Q9NPC8 RAD23BP3-201ENST00000454157 1152 ntBASIC4.52□□□□□ -1.69
SIX2Q9NPC8 snoU13.1-201ENST00000459157 104 ntBASIC4.52□□□□□ -1.69
SIX2Q9NPC8 AC109327.1-201ENST00000471666 403 ntBASIC4.52□□□□□ -1.69
SIX2Q9NPC8 RN7SL459P-201ENST00000481078 302 ntBASIC4.52□□□□□ -1.69
SIX2Q9NPC8 OR5H3P-201ENST00000502817 919 ntBASIC4.52□□□□□ -1.69
SIX2Q9NPC8 AC017037.1-201ENST00000508460 471 ntBASIC4.52□□□□□ -1.69
SIX2Q9NPC8 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms