Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AC022022.1-201ENST00000430304 178 ntBASIC5□□□□□ -1.61
AMBRA1Q9C0C7 RPS7P5-201ENST00000441482 581 ntBASIC5□□□□□ -1.61
AMBRA1Q9C0C7 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC5□□□□□ -1.61
AMBRA1Q9C0C7 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC5□□□□□ -1.61
AMBRA1Q9C0C7 AC005297.1-201ENST00000444765 862 ntBASIC5□□□□□ -1.61
AMBRA1Q9C0C7 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5□□□□□ -1.61
AMBRA1Q9C0C7 SETP11-201ENST00000473027 690 ntBASIC5□□□□□ -1.61
AMBRA1Q9C0C7 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC5□□□□□ -1.61
AMBRA1Q9C0C7 IGBP1P5-201ENST00000507524 1000 ntBASIC5□□□□□ -1.61
AMBRA1Q9C0C7 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5□□□□□ -1.61
AMBRA1Q9C0C7 AC091965.2-201ENST00000512324 613 ntBASIC5□□□□□ -1.61
AMBRA1Q9C0C7 Y_RNA.695-201ENST00000516715 107 ntBASIC5□□□□□ -1.61
AMBRA1Q9C0C7 SNORA43.3-201ENST00000517240 103 ntBASIC5□□□□□ -1.61
AMBRA1Q9C0C7 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5□□□□□ -1.61
AMBRA1Q9C0C7 NRBF2P4-201ENST00000520874 850 ntBASIC5□□□□□ -1.61
AMBRA1Q9C0C7 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC5□□□□□ -1.61
AMBRA1Q9C0C7 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC5□□□□□ -1.61
AMBRA1Q9C0C7 AC092851.1-201ENST00000535964 478 ntBASIC5□□□□□ -1.61
AMBRA1Q9C0C7 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC5□□□□□ -1.61
AMBRA1Q9C0C7 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5□□□□□ -1.61
AMBRA1Q9C0C7 AC027807.1-201ENST00000559921 996 ntBASIC5□□□□□ -1.61
AMBRA1Q9C0C7 NPM1P47-201ENST00000560843 856 ntBASIC5□□□□□ -1.61
AMBRA1Q9C0C7 AC022884.2-201ENST00000578535 580 ntBASIC5□□□□□ -1.61
AMBRA1Q9C0C7 MIR4472-2-201ENST00000582069 67 ntBASIC5□□□□□ -1.61
AMBRA1Q9C0C7 AC090312.2-201ENST00000582687 378 ntBASIC5□□□□□ -1.61
AMBRA1Q9C0C7 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5□□□□□ -1.61
AMBRA1Q9C0C7 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5□□□□□ -1.61
AMBRA1Q9C0C7 AL139286.2-201ENST00000606838 396 ntBASIC5□□□□□ -1.61
AMBRA1Q9C0C7 AC079395.2-201ENST00000610982 737 ntBASIC5□□□□□ -1.61
AMBRA1Q9C0C7 AC007204.2-201ENST00000615022 616 ntBASIC5□□□□□ -1.61
AMBRA1Q9C0C7 AC118658.2-201ENST00000618697 459 ntBASIC5□□□□□ -1.61
AMBRA1Q9C0C7 MIR6839-201ENST00000620425 113 ntBASIC5□□□□□ -1.61
AMBRA1Q9C0C7 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5□□□□□ -1.61
AMBRA1Q9C0C7 AL353743.4-201ENST00000422653 1547 ntBASIC5□□□□□ -1.61
AMBRA1Q9C0C7 RNF6P1-201ENST00000444889 1784 ntBASIC5□□□□□ -1.61
AMBRA1Q9C0C7 AC133552.1-201ENST00000569988 4007 ntBASIC5□□□□□ -1.61
AMBRA1Q9C0C7 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
AMBRA1Q9C0C7 CASC19-248ENST00000641674 1356 ntBASIC5□□□□□ -1.61
AMBRA1Q9C0C7 AL353796.1-201ENST00000561542 3241 ntBASIC5□□□□□ -1.61
AMBRA1Q9C0C7 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5□□□□□ -1.61
AMBRA1Q9C0C7 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
AMBRA1Q9C0C7 AL450345.1-202ENST00000605741 3881 ntBASIC4.99□□□□□ -1.61
AMBRA1Q9C0C7 AL672167.1-204ENST00000641875 3017 ntBASIC4.99□□□□□ -1.61
AMBRA1Q9C0C7 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.99□□□□□ -1.61
AMBRA1Q9C0C7 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
AMBRA1Q9C0C7 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
AMBRA1Q9C0C7 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
AMBRA1Q9C0C7 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
AMBRA1Q9C0C7 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC4.99□□□□□ -1.61
AMBRA1Q9C0C7 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
AMBRA1Q9C0C7 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.99□□□□□ -1.61
AMBRA1Q9C0C7 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
AMBRA1Q9C0C7 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
AMBRA1Q9C0C7 AC046144.1-201ENST00000478559 1853 ntBASIC4.99□□□□□ -1.61
AMBRA1Q9C0C7 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
AMBRA1Q9C0C7 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
AMBRA1Q9C0C7 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
AMBRA1Q9C0C7 RNA5SP132-201ENST00000364725 118 ntBASIC4.99□□□□□ -1.61
AMBRA1Q9C0C7 RNU6-619P-201ENST00000365146 108 ntBASIC4.99□□□□□ -1.61
AMBRA1Q9C0C7 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
AMBRA1Q9C0C7 OR5H15-201ENST00000383696 930 ntBASIC4.99□□□□□ -1.61
AMBRA1Q9C0C7 Y_RNA.408-201ENST00000383987 102 ntBASIC4.99□□□□□ -1.61
AMBRA1Q9C0C7 Y_RNA.553-201ENST00000384670 102 ntBASIC4.99□□□□□ -1.61
AMBRA1Q9C0C7 RN7SKP216-201ENST00000411050 312 ntBASIC4.99□□□□□ -1.61
AMBRA1Q9C0C7 TPT1P2-201ENST00000413105 503 ntBASIC4.99□□□□□ -1.61
AMBRA1Q9C0C7 CEACAMP8-201ENST00000413902 580 ntBASIC4.99□□□□□ -1.61
AMBRA1Q9C0C7 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.99□□□□□ -1.61
AMBRA1Q9C0C7 OR6C64P-201ENST00000419708 825 ntBASIC4.99□□□□□ -1.61
AMBRA1Q9C0C7 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.99□□□□□ -1.61
AMBRA1Q9C0C7 AC006366.1-201ENST00000422002 759 ntBASIC4.99□□□□□ -1.61
AMBRA1Q9C0C7 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
AMBRA1Q9C0C7 OR5BE1P-201ENST00000425977 939 ntBASIC4.99□□□□□ -1.61
AMBRA1Q9C0C7 MGAT2P2-201ENST00000427194 797 ntBASIC4.99□□□□□ -1.61
AMBRA1Q9C0C7 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.99□□□□□ -1.61
AMBRA1Q9C0C7 AL050321.1-201ENST00000432363 400 ntBASIC4.99□□□□□ -1.61
AMBRA1Q9C0C7 FTLP19-201ENST00000433300 394 ntBASIC4.99□□□□□ -1.61
AMBRA1Q9C0C7 RPL12P18-201ENST00000437175 325 ntBASIC4.99□□□□□ -1.61
AMBRA1Q9C0C7 GAPDHP58-201ENST00000438477 1006 ntBASIC4.99□□□□□ -1.61
AMBRA1Q9C0C7 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.99□□□□□ -1.61
AMBRA1Q9C0C7 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.99□□□□□ -1.61
AMBRA1Q9C0C7 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
AMBRA1Q9C0C7 AL591363.1-201ENST00000450091 483 ntBASIC4.99□□□□□ -1.61
AMBRA1Q9C0C7 AL035090.1-201ENST00000454835 332 ntBASIC4.99□□□□□ -1.61
AMBRA1Q9C0C7 RN7SL799P-201ENST00000475891 298 ntBASIC4.99□□□□□ -1.61
AMBRA1Q9C0C7 OR2AO1P-201ENST00000476497 403 ntBASIC4.99□□□□□ -1.61
AMBRA1Q9C0C7 SIAH1P1-201ENST00000479411 923 ntBASIC4.99□□□□□ -1.61
AMBRA1Q9C0C7 RN7SL466P-201ENST00000497546 295 ntBASIC4.99□□□□□ -1.61
AMBRA1Q9C0C7 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
AMBRA1Q9C0C7 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.99□□□□□ -1.61
AMBRA1Q9C0C7 LTV1P1-201ENST00000510683 1237 ntBASIC4.99□□□□□ -1.61
AMBRA1Q9C0C7 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC4.99□□□□□ -1.61
AMBRA1Q9C0C7 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.99□□□□□ -1.61
AMBRA1Q9C0C7 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC4.99□□□□□ -1.61
AMBRA1Q9C0C7 AC060788.1-201ENST00000521318 469 ntBASIC4.99□□□□□ -1.61
AMBRA1Q9C0C7 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.99□□□□□ -1.61
AMBRA1Q9C0C7 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.99□□□□□ -1.61
AMBRA1Q9C0C7 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.99□□□□□ -1.61
AMBRA1Q9C0C7 AC068993.1-201ENST00000546724 589 ntBASIC4.99□□□□□ -1.61
AMBRA1Q9C0C7 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.99□□□□□ -1.61
AMBRA1Q9C0C7 GTF2IP8-201ENST00000560687 584 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms