Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 AL450992.3-201ENST00000413192 568 ntBASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 AL096829.1-201ENST00000413677 457 ntBASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 AL590806.1-201ENST00000415818 853 ntBASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 AC004690.1-201ENST00000418216 328 ntBASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 AC062016.2-201ENST00000420950 676 ntBASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 AC245884.2-201ENST00000426257 404 ntBASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 BMS1P19-201ENST00000433925 393 ntBASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 AC093716.1-201ENST00000435923 377 ntBASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 YWHAQP9-201ENST00000445891 512 ntBASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 REG1CP-206ENST00000447469 496 ntBASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 AC140076.1-201ENST00000449897 361 ntBASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 AC016027.4-201ENST00000450866 277 ntBASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 BX248409.1-201ENST00000455497 255 ntBASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 AC112206.1-201ENST00000468416 477 ntBASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 CR383656.1-201ENST00000484916 377 ntBASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 AC104687.1-201ENST00000485829 412 ntBASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 AC083795.1-201ENST00000491760 320 ntBASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 THAP6-203ENST00000502620 582 ntTSL 3 BASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 AC114981.1-201ENST00000503897 678 ntBASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 AC010486.1-201ENST00000511793 424 ntBASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 RN7SKP67-201ENST00000515905 235 ntBASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 RNU6-1281P-201ENST00000516223 105 ntBASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 SCARNA18.1-201ENST00000516330 83 ntBASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 RNU6-1004P-201ENST00000516584 111 ntBASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 TRIM77BP-201ENST00000524985 1119 ntBASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 AC022690.1-201ENST00000526681 550 ntBASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 HPRT1P3-201ENST00000539521 576 ntBASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 AC093027.1-201ENST00000546698 429 ntBASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 AC078814.3-201ENST00000553036 491 ntBASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 OR4H6P-201ENST00000563771 921 ntBASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 AC037471.2-201ENST00000564941 598 ntBASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 MIR3682-201ENST00000581338 84 ntBASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 AC009977.1-201ENST00000586015 570 ntBASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 AC012507.3-201ENST00000603556 477 ntBASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 AC112187.2-201ENST00000604345 283 ntBASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 AL035413.2-201ENST00000604801 525 ntBASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 AC110994.2-201ENST00000635481 492 ntBASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 SHQ1P1-201ENST00000437111 1544 ntBASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 AC092692.1-201ENST00000623625 2595 ntBASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 AC015799.1-201ENST00000622996 3122 ntBASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 Y_RNA.97-201ENST00000363094 102 ntBASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 RNU6-839P-201ENST00000363347 108 ntBASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 RNU105B-201ENST00000364478 208 ntBASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 SNORA51.2-201ENST00000364595 132 ntBASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 RN7SKP186-201ENST00000365371 303 ntBASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SSBP3Q9BWW4 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms