Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 IGLVIV-53-201ENST00000520107 367 ntBASIC4.09□□□□□ -1.75
SSX3Q99909 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.09□□□□□ -1.75
SSX3Q99909 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.09□□□□□ -1.75
SSX3Q99909 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.09□□□□□ -1.75
SSX3Q99909 OR5D15P-201ENST00000531671 942 ntBASIC4.09□□□□□ -1.75
SSX3Q99909 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SSX3Q99909 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC4.09□□□□□ -1.75
SSX3Q99909 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.09□□□□□ -1.75
SSX3Q99909 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.09□□□□□ -1.75
SSX3Q99909 EDDM3DP-201ENST00000554692 434 ntBASIC4.09□□□□□ -1.75
SSX3Q99909 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.09□□□□□ -1.75
SSX3Q99909 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.09□□□□□ -1.75
SSX3Q99909 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.09□□□□□ -1.75
SSX3Q99909 AGGF1P9-201ENST00000561884 913 ntBASIC4.09□□□□□ -1.75
SSX3Q99909 MIR3934-201ENST00000579806 107 ntBASIC4.09□□□□□ -1.75
SSX3Q99909 AC105254.2-201ENST00000603636 436 ntBASIC4.09□□□□□ -1.75
SSX3Q99909 AC119501.1-201ENST00000603646 475 ntBASIC4.09□□□□□ -1.75
SSX3Q99909 AC005191.1-201ENST00000603950 358 ntBASIC4.09□□□□□ -1.75
SSX3Q99909 AC005084.1-201ENST00000605160 304 ntBASIC4.09□□□□□ -1.75
SSX3Q99909 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.09□□□□□ -1.75
SSX3Q99909 AC105429.2-201ENST00000610567 517 ntBASIC4.09□□□□□ -1.75
SSX3Q99909 AL049539.1-201ENST00000611964 459 ntBASIC4.09□□□□□ -1.75
SSX3Q99909 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.09□□□□□ -1.75
SSX3Q99909 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.09□□□□□ -1.75
SSX3Q99909 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.09□□□□□ -1.75
SSX3Q99909 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SSX3Q99909 KARSP3-201ENST00000571212 1504 ntBASIC4.09□□□□□ -1.75
SSX3Q99909 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
SSX3Q99909 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.09□□□□□ -1.76
SSX3Q99909 PNPT1P2-201ENST00000456768 2050 ntBASIC4.09□□□□□ -1.76
SSX3Q99909 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.76
SSX3Q99909 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
SSX3Q99909 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.08□□□□□ -1.76
SSX3Q99909 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SSX3Q99909 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
SSX3Q99909 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
SSX3Q99909 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SSX3Q99909 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
SSX3Q99909 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SSX3Q99909 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SSX3Q99909 SNORA2.3-201ENST00000383920 135 ntBASIC4.08□□□□□ -1.76
SSX3Q99909 SNORA51.8-201ENST00000384234 132 ntBASIC4.08□□□□□ -1.76
SSX3Q99909 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
SSX3Q99909 UQCRFS1P3-201ENST00000407697 385 ntBASIC4.08□□□□□ -1.76
SSX3Q99909 VDAC1P9-201ENST00000412766 841 ntBASIC4.08□□□□□ -1.76
SSX3Q99909 AC004552.1-201ENST00000419089 348 ntBASIC4.08□□□□□ -1.76
SSX3Q99909 AC092832.1-201ENST00000422934 400 ntBASIC4.08□□□□□ -1.76
SSX3Q99909 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SSX3Q99909 AC009238.2-201ENST00000431026 355 ntBASIC4.08□□□□□ -1.76
SSX3Q99909 AC006466.1-201ENST00000438721 289 ntBASIC4.08□□□□□ -1.76
SSX3Q99909 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.08□□□□□ -1.76
SSX3Q99909 AC092170.1-201ENST00000440211 356 ntBASIC4.08□□□□□ -1.76
SSX3Q99909 RPS26P2-201ENST00000440331 348 ntBASIC4.08□□□□□ -1.76
SSX3Q99909 RPL34P20-201ENST00000442771 351 ntBASIC4.08□□□□□ -1.76
SSX3Q99909 AL137845.2-201ENST00000444292 988 ntBASIC4.08□□□□□ -1.76
SSX3Q99909 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.08□□□□□ -1.76
SSX3Q99909 AC104306.1-201ENST00000449702 371 ntBASIC4.08□□□□□ -1.76
SSX3Q99909 HIGD1AP8-201ENST00000453927 274 ntBASIC4.08□□□□□ -1.76
SSX3Q99909 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SSX3Q99909 RPS26P3-201ENST00000470205 348 ntBASIC4.08□□□□□ -1.76
SSX3Q99909 RPL21P103-201ENST00000479921 488 ntBASIC4.08□□□□□ -1.76
SSX3Q99909 RN7SL319P-201ENST00000480656 221 ntBASIC4.08□□□□□ -1.76
SSX3Q99909 AC073522.1-201ENST00000483312 377 ntBASIC4.08□□□□□ -1.76
SSX3Q99909 AC090543.2-201ENST00000483963 348 ntBASIC4.08□□□□□ -1.76
SSX3Q99909 AC004057.1-201ENST00000485827 348 ntBASIC4.08□□□□□ -1.76
SSX3Q99909 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.08□□□□□ -1.76
SSX3Q99909 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SSX3Q99909 IGBP1P5-201ENST00000507524 1000 ntBASIC4.08□□□□□ -1.76
SSX3Q99909 MTCO3P27-201ENST00000514397 196 ntBASIC4.08□□□□□ -1.76
SSX3Q99909 ENPP7P9-201ENST00000514456 627 ntBASIC4.08□□□□□ -1.76
SSX3Q99909 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.08□□□□□ -1.76
SSX3Q99909 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.08□□□□□ -1.76
SSX3Q99909 AP003355.1-201ENST00000518956 587 ntBASIC4.08□□□□□ -1.76
SSX3Q99909 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.08□□□□□ -1.76
SSX3Q99909 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.08□□□□□ -1.76
SSX3Q99909 AC010306.1-201ENST00000523223 1117 ntBASIC4.08□□□□□ -1.76
SSX3Q99909 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SSX3Q99909 AC011611.5-201ENST00000552477 578 ntBASIC4.08□□□□□ -1.76
SSX3Q99909 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
SSX3Q99909 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.08□□□□□ -1.76
SSX3Q99909 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.08□□□□□ -1.76
SSX3Q99909 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.08□□□□□ -1.76
SSX3Q99909 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.08□□□□□ -1.76
SSX3Q99909 AC008759.3-201ENST00000613300 508 ntBASIC4.08□□□□□ -1.76
SSX3Q99909 AC104446.1-201ENST00000613728 1321 ntBASIC4.08□□□□□ -1.76
SSX3Q99909 AC004825.2-201ENST00000616634 455 ntBASIC4.08□□□□□ -1.76
SSX3Q99909 AC093875.1-201ENST00000623688 504 ntBASIC4.08□□□□□ -1.76
SSX3Q99909 AP001784.1-201ENST00000624107 428 ntBASIC4.08□□□□□ -1.76
SSX3Q99909 AP003400.6-201ENST00000624698 740 ntBASIC4.08□□□□□ -1.76
SSX3Q99909 AC025125.1-201ENST00000624743 1922 ntBASIC4.08□□□□□ -1.76
SSX3Q99909 MAPK10-263ENST00000641052 4307 ntBASIC4.08□□□□□ -1.76
SSX3Q99909 LINC02471-203ENST00000641941 4752 ntBASIC4.08□□□□□ -1.76
SSX3Q99909 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SSX3Q99909 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.08□□□□□ -1.76
SSX3Q99909 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.08□□□□□ -1.76
SSX3Q99909 AL672167.1-203ENST00000641299 2975 ntBASIC4.08□□□□□ -1.76
SSX3Q99909 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
SSX3Q99909 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
SSX3Q99909 ERCC6-202ENST00000374127 1782 ntBASIC4.07□□□□□ -1.76
SSX3Q99909 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms