Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 DEFB109A-201ENST00000482450 265 ntBASIC3.21□□□□□ -1.9
CSMD1Q96PZ7 RNU1-41P-201ENST00000516161 162 ntBASIC3.21□□□□□ -1.9
CSMD1Q96PZ7 RNU1-48P-201ENST00000516400 162 ntBASIC3.21□□□□□ -1.9
CSMD1Q96PZ7 AC087369.1-201ENST00000520775 996 ntBASIC3.21□□□□□ -1.9
CSMD1Q96PZ7 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC3.21□□□□□ -1.9
CSMD1Q96PZ7 SNX6P1-201ENST00000601728 1224 ntBASIC3.21□□□□□ -1.9
CSMD1Q96PZ7 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CSMD1Q96PZ7 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CSMD1Q96PZ7 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CSMD1Q96PZ7 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC3.21□□□□□ -1.9
CSMD1Q96PZ7 RNU6-729P-201ENST00000384399 107 ntBASIC3.21□□□□□ -1.9
CSMD1Q96PZ7 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.21□□□□□ -1.9
CSMD1Q96PZ7 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.21□□□□□ -1.9
CSMD1Q96PZ7 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.21□□□□□ -1.9
CSMD1Q96PZ7 RN7SKP18-201ENST00000516005 275 ntBASIC3.21□□□□□ -1.9
CSMD1Q96PZ7 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC3.21□□□□□ -1.9
CSMD1Q96PZ7 AC091905.2-201ENST00000623143 306 ntBASIC3.21□□□□□ -1.9
CSMD1Q96PZ7 OTUD4P1-201ENST00000237841 3067 ntBASIC3.21□□□□□ -1.9
CSMD1Q96PZ7 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CSMD1Q96PZ7 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CSMD1Q96PZ7 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CSMD1Q96PZ7 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CSMD1Q96PZ7 MIR195-201ENST00000385194 87 ntBASIC3.2□□□□□ -1.9
CSMD1Q96PZ7 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.2□□□□□ -1.9
CSMD1Q96PZ7 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.2□□□□□ -1.9
CSMD1Q96PZ7 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC3.2□□□□□ -1.9
CSMD1Q96PZ7 AL355365.1-201ENST00000616480 294 ntBASIC3.2□□□□□ -1.9
CSMD1Q96PZ7 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CSMD1Q96PZ7 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CSMD1Q96PZ7 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC3.2□□□□□ -1.9
CSMD1Q96PZ7 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC3.2□□□□□ -1.9
CSMD1Q96PZ7 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CSMD1Q96PZ7 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CSMD1Q96PZ7 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
CSMD1Q96PZ7 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
CSMD1Q96PZ7 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.2□□□□□ -1.9
CSMD1Q96PZ7 AL080315.1-201ENST00000406055 466 ntBASIC3.2□□□□□ -1.9
CSMD1Q96PZ7 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.2□□□□□ -1.9
CSMD1Q96PZ7 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.2□□□□□ -1.9
CSMD1Q96PZ7 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.2□□□□□ -1.9
CSMD1Q96PZ7 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CSMD1Q96PZ7 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.2□□□□□ -1.9
CSMD1Q96PZ7 AC091544.4-201ENST00000555268 342 ntBASIC3.2□□□□□ -1.9
CSMD1Q96PZ7 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CSMD1Q96PZ7 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CSMD1Q96PZ7 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
CSMD1Q96PZ7 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC3.2□□□□□ -1.9
CSMD1Q96PZ7 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CSMD1Q96PZ7 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CSMD1Q96PZ7 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CSMD1Q96PZ7 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CSMD1Q96PZ7 RNA5SP97-201ENST00000365006 84 ntBASIC3.2□□□□□ -1.9
CSMD1Q96PZ7 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.2□□□□□ -1.9
CSMD1Q96PZ7 HMGN2P27-201ENST00000427352 270 ntBASIC3.2□□□□□ -1.9
CSMD1Q96PZ7 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
CSMD1Q96PZ7 RPL36AP13-201ENST00000457490 317 ntBASIC3.2□□□□□ -1.9
CSMD1Q96PZ7 RNU2-27P-201ENST00000516185 142 ntBASIC3.2□□□□□ -1.9
CSMD1Q96PZ7 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CSMD1Q96PZ7 PHBP17-201ENST00000528576 541 ntBASIC3.2□□□□□ -1.9
CSMD1Q96PZ7 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC3.2□□□□□ -1.9
CSMD1Q96PZ7 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC3.2□□□□□ -1.9
CSMD1Q96PZ7 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CSMD1Q96PZ7 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.19□□□□□ -1.9
CSMD1Q96PZ7 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC3.19□□□□□ -1.9
CSMD1Q96PZ7 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.19□□□□□ -1.9
CSMD1Q96PZ7 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CSMD1Q96PZ7 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
CSMD1Q96PZ7 Y_RNA.466-201ENST00000384294 113 ntBASIC3.19□□□□□ -1.9
CSMD1Q96PZ7 RPL36AP10-201ENST00000421785 322 ntBASIC3.19□□□□□ -1.9
CSMD1Q96PZ7 NPM1P25-201ENST00000429734 854 ntBASIC3.19□□□□□ -1.9
CSMD1Q96PZ7 GTF3AP5-201ENST00000442645 697 ntBASIC3.19□□□□□ -1.9
CSMD1Q96PZ7 RPS17P13-201ENST00000448974 407 ntBASIC3.19□□□□□ -1.9
CSMD1Q96PZ7 RBMY2UP-201ENST00000453474 324 ntBASIC3.19□□□□□ -1.9
CSMD1Q96PZ7 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.19□□□□□ -1.9
CSMD1Q96PZ7 HIGD1AP3-201ENST00000515857 278 ntBASIC3.19□□□□□ -1.9
CSMD1Q96PZ7 AC133552.5-201ENST00000604266 540 ntBASIC3.19□□□□□ -1.9
CSMD1Q96PZ7 AP005264.7-201ENST00000625003 745 ntBASIC3.19□□□□□ -1.9
CSMD1Q96PZ7 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC3.19□□□□□ -1.9
CSMD1Q96PZ7 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC3.19□□□□□ -1.9
CSMD1Q96PZ7 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
CSMD1Q96PZ7 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CSMD1Q96PZ7 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC3.19□□□□□ -1.9
CSMD1Q96PZ7 AC024341.1-201ENST00000526444 1552 ntBASIC3.19□□□□□ -1.9
CSMD1Q96PZ7 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
CSMD1Q96PZ7 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CSMD1Q96PZ7 FTLP6-201ENST00000355274 422 ntBASIC3.19□□□□□ -1.9
CSMD1Q96PZ7 SNORA48.8-201ENST00000391324 134 ntBASIC3.19□□□□□ -1.9
CSMD1Q96PZ7 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC3.19□□□□□ -1.9
CSMD1Q96PZ7 AC023141.12-201ENST00000512399 199 ntBASIC3.19□□□□□ -1.9
CSMD1Q96PZ7 AC092747.2-201ENST00000545069 983 ntBASIC3.19□□□□□ -1.9
CSMD1Q96PZ7 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC3.19□□□□□ -1.9
CSMD1Q96PZ7 AL451007.1-201ENST00000595491 289 ntBASIC3.19□□□□□ -1.9
CSMD1Q96PZ7 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.19□□□□□ -1.9
CSMD1Q96PZ7 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC3.19□□□□□ -1.9
CSMD1Q96PZ7 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CSMD1Q96PZ7 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
CSMD1Q96PZ7 HSPD1P14-201ENST00000432666 1618 ntBASIC3.19□□□□□ -1.9
CSMD1Q96PZ7 MAPK10-372ENST00000641954 3413 ntBASIC3.19□□□□□ -1.9
CSMD1Q96PZ7 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CSMD1Q96PZ7 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms