Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 AC010329.2-201ENST00000595195 2737 ntBASIC4.22□□□□□ -1.73
CSPG4P5Q96PW8 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CSPG4P5Q96PW8 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CSPG4P5Q96PW8 RNU6-225P-201ENST00000384613 103 ntBASIC4.22□□□□□ -1.73
CSPG4P5Q96PW8 RNU11-4P-201ENST00000391149 133 ntBASIC4.22□□□□□ -1.73
CSPG4P5Q96PW8 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CSPG4P5Q96PW8 AL603766.1-201ENST00000407763 664 ntBASIC4.22□□□□□ -1.73
CSPG4P5Q96PW8 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.22□□□□□ -1.73
CSPG4P5Q96PW8 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.22□□□□□ -1.73
CSPG4P5Q96PW8 AL158073.1-201ENST00000426848 1104 ntBASIC4.22□□□□□ -1.73
CSPG4P5Q96PW8 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.22□□□□□ -1.73
CSPG4P5Q96PW8 RPL12P46-201ENST00000436610 195 ntBASIC4.22□□□□□ -1.73
CSPG4P5Q96PW8 NUTF2P3-201ENST00000448540 384 ntBASIC4.22□□□□□ -1.73
CSPG4P5Q96PW8 AC009220.1-201ENST00000451614 275 ntBASIC4.22□□□□□ -1.73
CSPG4P5Q96PW8 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.22□□□□□ -1.73
CSPG4P5Q96PW8 NDUFA5P9-201ENST00000472609 340 ntBASIC4.22□□□□□ -1.73
CSPG4P5Q96PW8 RPL29P14-201ENST00000495837 428 ntBASIC4.22□□□□□ -1.73
CSPG4P5Q96PW8 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.22□□□□□ -1.73
CSPG4P5Q96PW8 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.22□□□□□ -1.73
CSPG4P5Q96PW8 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.22□□□□□ -1.73
CSPG4P5Q96PW8 MIR3939-201ENST00000582614 106 ntBASIC4.22□□□□□ -1.73
CSPG4P5Q96PW8 AC069366.1-201ENST00000583159 838 ntBASIC4.22□□□□□ -1.73
CSPG4P5Q96PW8 MIR6798-201ENST00000612887 67 ntBASIC4.22□□□□□ -1.73
CSPG4P5Q96PW8 AC116447.1-201ENST00000613153 453 ntBASIC4.22□□□□□ -1.73
CSPG4P5Q96PW8 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.22□□□□□ -1.73
CSPG4P5Q96PW8 AC145207.9-201ENST00000623802 325 ntBASIC4.22□□□□□ -1.73
CSPG4P5Q96PW8 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.22□□□□□ -1.73
CSPG4P5Q96PW8 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.22□□□□□ -1.73
CSPG4P5Q96PW8 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
CSPG4P5Q96PW8 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CSPG4P5Q96PW8 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
CSPG4P5Q96PW8 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CSPG4P5Q96PW8 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CSPG4P5Q96PW8 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.22□□□□□ -1.73
CSPG4P5Q96PW8 AL451142.2-201ENST00000429076 2090 ntBASIC4.22□□□□□ -1.73
CSPG4P5Q96PW8 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
CSPG4P5Q96PW8 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CSPG4P5Q96PW8 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.21□□□□□ -1.74
CSPG4P5Q96PW8 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.21□□□□□ -1.74
CSPG4P5Q96PW8 SNORD74.4-201ENST00000364129 80 ntBASIC4.21□□□□□ -1.74
CSPG4P5Q96PW8 RNU6-1251P-201ENST00000364502 107 ntBASIC4.21□□□□□ -1.74
CSPG4P5Q96PW8 MIR141-201ENST00000384975 95 ntBASIC4.21□□□□□ -1.74
CSPG4P5Q96PW8 ST13P16-201ENST00000401760 781 ntBASIC4.21□□□□□ -1.74
CSPG4P5Q96PW8 Y_RNA.625-201ENST00000411256 107 ntBASIC4.21□□□□□ -1.74
CSPG4P5Q96PW8 MTCO1P54-201ENST00000430139 712 ntBASIC4.21□□□□□ -1.74
CSPG4P5Q96PW8 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.21□□□□□ -1.74
CSPG4P5Q96PW8 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.21□□□□□ -1.74
CSPG4P5Q96PW8 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.21□□□□□ -1.74
CSPG4P5Q96PW8 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.21□□□□□ -1.74
CSPG4P5Q96PW8 AC010469.1-201ENST00000463864 576 ntBASIC4.21□□□□□ -1.74
CSPG4P5Q96PW8 AC021205.1-201ENST00000468797 348 ntBASIC4.21□□□□□ -1.74
CSPG4P5Q96PW8 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.21□□□□□ -1.74
CSPG4P5Q96PW8 MYL12AP1-201ENST00000518490 515 ntBASIC4.21□□□□□ -1.74
CSPG4P5Q96PW8 HIGD1AP5-201ENST00000529959 259 ntBASIC4.21□□□□□ -1.74
CSPG4P5Q96PW8 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.21□□□□□ -1.74
CSPG4P5Q96PW8 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CSPG4P5Q96PW8 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.21□□□□□ -1.74
CSPG4P5Q96PW8 AC068446.3-201ENST00000555285 382 ntBASIC4.21□□□□□ -1.74
CSPG4P5Q96PW8 AC068714.1-201ENST00000559623 800 ntBASIC4.21□□□□□ -1.74
CSPG4P5Q96PW8 AP005901.4-201ENST00000577336 569 ntBASIC4.21□□□□□ -1.74
CSPG4P5Q96PW8 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.21□□□□□ -1.74
CSPG4P5Q96PW8 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.21□□□□□ -1.74
CSPG4P5Q96PW8 AC068020.1-201ENST00000594215 661 ntBASIC4.21□□□□□ -1.74
CSPG4P5Q96PW8 AC104662.1-201ENST00000604448 511 ntBASIC4.21□□□□□ -1.74
CSPG4P5Q96PW8 AL451044.1-201ENST00000604867 238 ntBASIC4.21□□□□□ -1.74
CSPG4P5Q96PW8 AC117490.2-201ENST00000610042 594 ntBASIC4.21□□□□□ -1.74
CSPG4P5Q96PW8 AC010608.2-201ENST00000624830 470 ntBASIC4.21□□□□□ -1.74
CSPG4P5Q96PW8 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.21□□□□□ -1.74
CSPG4P5Q96PW8 MIR6715B-201ENST00000637172 77 ntBASIC4.21□□□□□ -1.74
CSPG4P5Q96PW8 AL773545.4-201ENST00000637262 310 ntBASIC4.21□□□□□ -1.74
CSPG4P5Q96PW8 AL513478.4-201ENST00000641636 310 ntBASIC4.21□□□□□ -1.74
CSPG4P5Q96PW8 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CSPG4P5Q96PW8 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CSPG4P5Q96PW8 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CSPG4P5Q96PW8 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
CSPG4P5Q96PW8 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.21□□□□□ -1.74
CSPG4P5Q96PW8 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
CSPG4P5Q96PW8 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.21□□□□□ -1.74
CSPG4P5Q96PW8 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CSPG4P5Q96PW8 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CSPG4P5Q96PW8 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CSPG4P5Q96PW8 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
CSPG4P5Q96PW8 OR11H4-201ENST00000315409 1082 ntBASIC4.2□□□□□ -1.74
CSPG4P5Q96PW8 SNORA60-201ENST00000362396 134 ntBASIC4.2□□□□□ -1.74
CSPG4P5Q96PW8 SNORD35B-201ENST00000363660 87 ntBASIC4.2□□□□□ -1.74
CSPG4P5Q96PW8 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.2□□□□□ -1.74
CSPG4P5Q96PW8 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CSPG4P5Q96PW8 RNU6-603P-201ENST00000411403 107 ntBASIC4.2□□□□□ -1.74
CSPG4P5Q96PW8 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.2□□□□□ -1.74
CSPG4P5Q96PW8 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.2□□□□□ -1.74
CSPG4P5Q96PW8 AC069285.2-201ENST00000440210 275 ntBASIC4.2□□□□□ -1.74
CSPG4P5Q96PW8 RPS4XP4-201ENST00000443195 763 ntBASIC4.2□□□□□ -1.74
CSPG4P5Q96PW8 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.2□□□□□ -1.74
CSPG4P5Q96PW8 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.2□□□□□ -1.74
CSPG4P5Q96PW8 FCF1P7-201ENST00000451185 558 ntBASIC4.2□□□□□ -1.74
CSPG4P5Q96PW8 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.2□□□□□ -1.74
CSPG4P5Q96PW8 RPL38P1-201ENST00000460914 211 ntBASIC4.2□□□□□ -1.74
CSPG4P5Q96PW8 AC010618.1-201ENST00000469924 477 ntBASIC4.2□□□□□ -1.74
CSPG4P5Q96PW8 RPS6P4-201ENST00000494693 758 ntBASIC4.2□□□□□ -1.74
CSPG4P5Q96PW8 HPRT1P2-201ENST00000505250 544 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms