Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AL133388.1-201ENST00000404509 287 ntBASIC5.05□□□□□ -1.6
VPS50Q96JG6 AL356131.1-201ENST00000405826 414 ntBASIC5.05□□□□□ -1.6
VPS50Q96JG6 SNORA11C-201ENST00000408532 129 ntBASIC5.05□□□□□ -1.6
VPS50Q96JG6 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
VPS50Q96JG6 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC5.05□□□□□ -1.6
VPS50Q96JG6 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.05□□□□□ -1.6
VPS50Q96JG6 RPL36AP10-201ENST00000421785 322 ntBASIC5.05□□□□□ -1.6
VPS50Q96JG6 AP001324.1-201ENST00000428553 399 ntBASIC5.05□□□□□ -1.6
VPS50Q96JG6 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.05□□□□□ -1.6
VPS50Q96JG6 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC5.05□□□□□ -1.6
VPS50Q96JG6 HMGB3P9-201ENST00000441799 583 ntBASIC5.05□□□□□ -1.6
VPS50Q96JG6 EIF4A1P11-201ENST00000451239 222 ntBASIC5.05□□□□□ -1.6
VPS50Q96JG6 RN7SL329P-201ENST00000467740 299 ntBASIC5.05□□□□□ -1.6
VPS50Q96JG6 AC092754.1-201ENST00000472975 479 ntBASIC5.05□□□□□ -1.6
VPS50Q96JG6 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC5.05□□□□□ -1.6
VPS50Q96JG6 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC5.05□□□□□ -1.6
VPS50Q96JG6 AC022133.1-201ENST00000490961 571 ntBASIC5.05□□□□□ -1.6
VPS50Q96JG6 AC109462.1-201ENST00000491087 368 ntBASIC5.05□□□□□ -1.6
VPS50Q96JG6 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.05□□□□□ -1.6
VPS50Q96JG6 HMGB3P16-201ENST00000508037 287 ntBASIC5.05□□□□□ -1.6
VPS50Q96JG6 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC5.05□□□□□ -1.6
VPS50Q96JG6 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.05□□□□□ -1.6
VPS50Q96JG6 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC5.05□□□□□ -1.6
VPS50Q96JG6 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.05□□□□□ -1.6
VPS50Q96JG6 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC5.05□□□□□ -1.6
VPS50Q96JG6 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.05□□□□□ -1.6
VPS50Q96JG6 AC135279.1-201ENST00000543493 504 ntBASIC5.05□□□□□ -1.6
VPS50Q96JG6 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.05□□□□□ -1.6
VPS50Q96JG6 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC5.05□□□□□ -1.6
VPS50Q96JG6 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.05□□□□□ -1.6
VPS50Q96JG6 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC5.05□□□□□ -1.6
VPS50Q96JG6 RN7SL52P-201ENST00000584271 284 ntBASIC5.05□□□□□ -1.6
VPS50Q96JG6 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.05□□□□□ -1.6
VPS50Q96JG6 EIF1P6-201ENST00000600054 334 ntBASIC5.05□□□□□ -1.6
VPS50Q96JG6 AC069307.1-201ENST00000602820 447 ntBASIC5.05□□□□□ -1.6
VPS50Q96JG6 AC069304.3-201ENST00000603938 1084 ntBASIC5.05□□□□□ -1.6
VPS50Q96JG6 MIR7155-201ENST00000615925 56 ntBASIC5.05□□□□□ -1.6
VPS50Q96JG6 AC009318.3-201ENST00000616916 503 ntBASIC5.05□□□□□ -1.6
VPS50Q96JG6 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.05□□□□□ -1.6
VPS50Q96JG6 AC007490.1-201ENST00000624321 703 ntBASIC5.05□□□□□ -1.6
VPS50Q96JG6 AC087821.2-201ENST00000637086 450 ntBASIC5.05□□□□□ -1.6
VPS50Q96JG6 AC068137.4-201ENST00000638485 296 ntBASIC5.05□□□□□ -1.6
VPS50Q96JG6 AP005901.5-201ENST00000545779 1796 ntBASIC5.05□□□□□ -1.6
VPS50Q96JG6 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
VPS50Q96JG6 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.05□□□□□ -1.6
VPS50Q96JG6 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
VPS50Q96JG6 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
VPS50Q96JG6 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
VPS50Q96JG6 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VPS50Q96JG6 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VPS50Q96JG6 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
VPS50Q96JG6 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.04□□□□□ -1.6
VPS50Q96JG6 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.04□□□□□ -1.6
VPS50Q96JG6 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VPS50Q96JG6 SNORA17.1-201ENST00000362945 126 ntBASIC5.04□□□□□ -1.6
VPS50Q96JG6 Y_RNA.192-201ENST00000363977 102 ntBASIC5.04□□□□□ -1.6
VPS50Q96JG6 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VPS50Q96JG6 AC013442.1-201ENST00000397347 228 ntBASIC5.04□□□□□ -1.6
VPS50Q96JG6 SNORA11B-201ENST00000408175 129 ntBASIC5.04□□□□□ -1.6
VPS50Q96JG6 MIR1302-8-201ENST00000408342 128 ntBASIC5.04□□□□□ -1.6
VPS50Q96JG6 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.04□□□□□ -1.6
VPS50Q96JG6 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.04□□□□□ -1.6
VPS50Q96JG6 AC090960.1-201ENST00000421072 306 ntBASIC5.04□□□□□ -1.6
VPS50Q96JG6 RPL7P53-201ENST00000421245 739 ntBASIC5.04□□□□□ -1.6
VPS50Q96JG6 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.04□□□□□ -1.6
VPS50Q96JG6 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC5.04□□□□□ -1.6
VPS50Q96JG6 AL365396.1-201ENST00000430854 671 ntBASIC5.04□□□□□ -1.6
VPS50Q96JG6 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.04□□□□□ -1.6
VPS50Q96JG6 GAPDHP58-201ENST00000438477 1006 ntBASIC5.04□□□□□ -1.6
VPS50Q96JG6 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.04□□□□□ -1.6
VPS50Q96JG6 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.04□□□□□ -1.6
VPS50Q96JG6 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.04□□□□□ -1.6
VPS50Q96JG6 AL935212.3-201ENST00000450729 284 ntBASIC5.04□□□□□ -1.6
VPS50Q96JG6 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC5.04□□□□□ -1.6
VPS50Q96JG6 AL389915.2-201ENST00000454576 441 ntBASIC5.04□□□□□ -1.6
VPS50Q96JG6 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
VPS50Q96JG6 RPSAP50-201ENST00000481955 852 ntBASIC5.04□□□□□ -1.6
VPS50Q96JG6 RPS24P16-201ENST00000497294 392 ntBASIC5.04□□□□□ -1.6
VPS50Q96JG6 AL035404.1-201ENST00000497982 568 ntBASIC5.04□□□□□ -1.6
VPS50Q96JG6 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC5.04□□□□□ -1.6
VPS50Q96JG6 GTF2F2P1-201ENST00000511083 675 ntBASIC5.04□□□□□ -1.6
VPS50Q96JG6 NDUFB4P12-201ENST00000513465 390 ntBASIC5.04□□□□□ -1.6
VPS50Q96JG6 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.04□□□□□ -1.6
VPS50Q96JG6 RNA5SP360-201ENST00000516555 118 ntBASIC5.04□□□□□ -1.6
VPS50Q96JG6 C1GALT1P3-201ENST00000522049 819 ntBASIC5.04□□□□□ -1.6
VPS50Q96JG6 AP003461.1-201ENST00000528866 78 ntBASIC5.04□□□□□ -1.6
VPS50Q96JG6 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.04□□□□□ -1.6
VPS50Q96JG6 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VPS50Q96JG6 AC024940.3-201ENST00000538551 316 ntBASIC5.04□□□□□ -1.6
VPS50Q96JG6 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.04□□□□□ -1.6
VPS50Q96JG6 AC008015.1-201ENST00000555505 465 ntBASIC5.04□□□□□ -1.6
VPS50Q96JG6 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.04□□□□□ -1.6
VPS50Q96JG6 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC5.04□□□□□ -1.6
VPS50Q96JG6 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC5.04□□□□□ -1.6
VPS50Q96JG6 AC022884.2-201ENST00000578535 580 ntBASIC5.04□□□□□ -1.6
VPS50Q96JG6 RN7SL356P-201ENST00000582228 248 ntBASIC5.04□□□□□ -1.6
VPS50Q96JG6 PIGPP4-201ENST00000584447 307 ntBASIC5.04□□□□□ -1.6
VPS50Q96JG6 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.04□□□□□ -1.6
VPS50Q96JG6 AC015726.1-201ENST00000602353 681 ntBASIC5.04□□□□□ -1.6
VPS50Q96JG6 MRPS35P3-201ENST00000603189 709 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 129.3 ms