Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 RN7SL727P-201ENST00000482164 296 ntBASIC5.59□□□□□ -1.51
CDK5RAP3Q96JB5 RPS4XP14-201ENST00000493072 781 ntBASIC5.59□□□□□ -1.51
CDK5RAP3Q96JB5 AC073073.1-201ENST00000493920 463 ntBASIC5.59□□□□□ -1.51
CDK5RAP3Q96JB5 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.59□□□□□ -1.51
CDK5RAP3Q96JB5 AC138938.1-201ENST00000515431 782 ntBASIC5.59□□□□□ -1.51
CDK5RAP3Q96JB5 RNU6-416P-201ENST00000516265 103 ntBASIC5.59□□□□□ -1.51
CDK5RAP3Q96JB5 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.59□□□□□ -1.51
CDK5RAP3Q96JB5 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.59□□□□□ -1.51
CDK5RAP3Q96JB5 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC5.59□□□□□ -1.51
CDK5RAP3Q96JB5 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC5.59□□□□□ -1.51
CDK5RAP3Q96JB5 AC007834.2-201ENST00000536310 343 ntBASIC5.59□□□□□ -1.51
CDK5RAP3Q96JB5 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.59□□□□□ -1.51
CDK5RAP3Q96JB5 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CDK5RAP3Q96JB5 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.59□□□□□ -1.51
CDK5RAP3Q96JB5 DUXAP6-201ENST00000553858 601 ntBASIC5.59□□□□□ -1.51
CDK5RAP3Q96JB5 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC5.59□□□□□ -1.51
CDK5RAP3Q96JB5 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC5.59□□□□□ -1.51
CDK5RAP3Q96JB5 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.59□□□□□ -1.51
CDK5RAP3Q96JB5 MIR4691-201ENST00000583764 85 ntBASIC5.59□□□□□ -1.51
CDK5RAP3Q96JB5 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.59□□□□□ -1.51
CDK5RAP3Q96JB5 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC5.59□□□□□ -1.51
CDK5RAP3Q96JB5 VN1R88P-201ENST00000596787 292 ntBASIC5.59□□□□□ -1.51
CDK5RAP3Q96JB5 AL353778.1-201ENST00000603149 408 ntBASIC5.59□□□□□ -1.51
CDK5RAP3Q96JB5 AC114878.2-201ENST00000604863 1251 ntBASIC5.59□□□□□ -1.51
CDK5RAP3Q96JB5 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.59□□□□□ -1.51
CDK5RAP3Q96JB5 AC243654.2-201ENST00000612843 443 ntBASIC5.59□□□□□ -1.51
CDK5RAP3Q96JB5 AL627230.1-201ENST00000613077 211 ntBASIC5.59□□□□□ -1.51
CDK5RAP3Q96JB5 AL591926.8-201ENST00000616876 211 ntBASIC5.59□□□□□ -1.51
CDK5RAP3Q96JB5 AC078883.4-201ENST00000623218 367 ntBASIC5.59□□□□□ -1.51
CDK5RAP3Q96JB5 AC112694.2-201ENST00000623697 768 ntBASIC5.59□□□□□ -1.51
CDK5RAP3Q96JB5 AC087821.2-201ENST00000637086 450 ntBASIC5.59□□□□□ -1.51
CDK5RAP3Q96JB5 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.59□□□□□ -1.51
CDK5RAP3Q96JB5 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.59□□□□□ -1.52
CDK5RAP3Q96JB5 AC104118.1-201ENST00000607625 1589 ntBASIC5.59□□□□□ -1.52
CDK5RAP3Q96JB5 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.52
CDK5RAP3Q96JB5 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDK5RAP3Q96JB5 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDK5RAP3Q96JB5 HSPA8P18-201ENST00000439846 1928 ntBASIC5.58□□□□□ -1.52
CDK5RAP3Q96JB5 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CDK5RAP3Q96JB5 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDK5RAP3Q96JB5 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
CDK5RAP3Q96JB5 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDK5RAP3Q96JB5 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDK5RAP3Q96JB5 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
CDK5RAP3Q96JB5 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
CDK5RAP3Q96JB5 AL445437.1-201ENST00000623157 3087 ntBASIC5.58□□□□□ -1.52
CDK5RAP3Q96JB5 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDK5RAP3Q96JB5 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDK5RAP3Q96JB5 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
CDK5RAP3Q96JB5 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDK5RAP3Q96JB5 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDK5RAP3Q96JB5 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CDK5RAP3Q96JB5 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDK5RAP3Q96JB5 OR1L1-202ENST00000373686 1083 ntBASIC5.58□□□□□ -1.52
CDK5RAP3Q96JB5 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC5.58□□□□□ -1.52
CDK5RAP3Q96JB5 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.58□□□□□ -1.52
CDK5RAP3Q96JB5 QRSL1P2-201ENST00000418582 964 ntBASIC5.58□□□□□ -1.52
CDK5RAP3Q96JB5 BX510359.3-201ENST00000422168 306 ntBASIC5.58□□□□□ -1.52
CDK5RAP3Q96JB5 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.58□□□□□ -1.52
CDK5RAP3Q96JB5 FGF7P5-201ENST00000441829 291 ntBASIC5.58□□□□□ -1.52
CDK5RAP3Q96JB5 Z83846.1-201ENST00000446798 265 ntBASIC5.58□□□□□ -1.52
CDK5RAP3Q96JB5 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC5.58□□□□□ -1.52
CDK5RAP3Q96JB5 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC5.58□□□□□ -1.52
CDK5RAP3Q96JB5 NECAP1P2-201ENST00000455668 727 ntBASIC5.58□□□□□ -1.52
CDK5RAP3Q96JB5 PPIAP21-201ENST00000464473 501 ntBASIC5.58□□□□□ -1.52
CDK5RAP3Q96JB5 RN7SL177P-201ENST00000476596 299 ntBASIC5.58□□□□□ -1.52
CDK5RAP3Q96JB5 BX284632.1-201ENST00000478218 541 ntBASIC5.58□□□□□ -1.52
CDK5RAP3Q96JB5 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC5.58□□□□□ -1.52
CDK5RAP3Q96JB5 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.58□□□□□ -1.52
CDK5RAP3Q96JB5 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC5.58□□□□□ -1.52
CDK5RAP3Q96JB5 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.58□□□□□ -1.52
CDK5RAP3Q96JB5 AC010306.1-201ENST00000523223 1117 ntBASIC5.58□□□□□ -1.52
CDK5RAP3Q96JB5 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.58□□□□□ -1.52
CDK5RAP3Q96JB5 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.58□□□□□ -1.52
CDK5RAP3Q96JB5 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.58□□□□□ -1.52
CDK5RAP3Q96JB5 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC5.58□□□□□ -1.52
CDK5RAP3Q96JB5 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.58□□□□□ -1.52
CDK5RAP3Q96JB5 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CDK5RAP3Q96JB5 AC092747.2-201ENST00000545069 983 ntBASIC5.58□□□□□ -1.52
CDK5RAP3Q96JB5 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.58□□□□□ -1.52
CDK5RAP3Q96JB5 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.58□□□□□ -1.52
CDK5RAP3Q96JB5 TVP23CP2-201ENST00000571473 623 ntBASIC5.58□□□□□ -1.52
CDK5RAP3Q96JB5 AC022662.1-201ENST00000580252 331 ntBASIC5.58□□□□□ -1.52
CDK5RAP3Q96JB5 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC5.58□□□□□ -1.52
CDK5RAP3Q96JB5 AC068790.7-201ENST00000602347 528 ntBASIC5.58□□□□□ -1.52
CDK5RAP3Q96JB5 SDR42E1P1-201ENST00000611327 477 ntBASIC5.58□□□□□ -1.52
CDK5RAP3Q96JB5 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.58□□□□□ -1.52
CDK5RAP3Q96JB5 AC004777.1-201ENST00000624317 287 ntBASIC5.58□□□□□ -1.52
CDK5RAP3Q96JB5 AC092608.3-201ENST00000625017 386 ntBASIC5.58□□□□□ -1.52
CDK5RAP3Q96JB5 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.58□□□□□ -1.52
CDK5RAP3Q96JB5 MFSD8-245ENST00000641743 948 ntBASIC5.58□□□□□ -1.52
CDK5RAP3Q96JB5 PHKBP1-201ENST00000450951 1951 ntBASIC5.58□□□□□ -1.52
CDK5RAP3Q96JB5 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.58□□□□□ -1.52
CDK5RAP3Q96JB5 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.58□□□□□ -1.52
CDK5RAP3Q96JB5 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
CDK5RAP3Q96JB5 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.57□□□□□ -1.52
CDK5RAP3Q96JB5 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
CDK5RAP3Q96JB5 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.57□□□□□ -1.52
CDK5RAP3Q96JB5 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDK5RAP3Q96JB5 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms