Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.97□□□□□ -1.61
SNED1Q8TER0 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
SNED1Q8TER0 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SNED1Q8TER0 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
SNED1Q8TER0 RNU6-525P-201ENST00000363685 104 ntBASIC4.97□□□□□ -1.61
SNED1Q8TER0 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.97□□□□□ -1.61
SNED1Q8TER0 U1.1-201ENST00000384101 164 ntBASIC4.97□□□□□ -1.61
SNED1Q8TER0 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.97□□□□□ -1.61
SNED1Q8TER0 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC4.97□□□□□ -1.61
SNED1Q8TER0 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SNED1Q8TER0 CYCSP53-201ENST00000455540 265 ntBASIC4.97□□□□□ -1.61
SNED1Q8TER0 MTND6P32-201ENST00000457611 483 ntBASIC4.97□□□□□ -1.61
SNED1Q8TER0 RNA5SP103-201ENST00000459503 118 ntBASIC4.97□□□□□ -1.61
SNED1Q8TER0 NFU1-207ENST00000462320 558 ntTSL 4 BASIC4.97□□□□□ -1.61
SNED1Q8TER0 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.97□□□□□ -1.61
SNED1Q8TER0 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC4.97□□□□□ -1.61
SNED1Q8TER0 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.97□□□□□ -1.61
SNED1Q8TER0 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.97□□□□□ -1.61
SNED1Q8TER0 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC4.97□□□□□ -1.61
SNED1Q8TER0 MTND1P6-201ENST00000523621 946 ntBASIC4.97□□□□□ -1.61
SNED1Q8TER0 AC124068.1-201ENST00000563131 678 ntBASIC4.97□□□□□ -1.61
SNED1Q8TER0 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.97□□□□□ -1.61
SNED1Q8TER0 AP003117.1-201ENST00000602771 554 ntBASIC4.97□□□□□ -1.61
SNED1Q8TER0 BX322635.1-201ENST00000605804 496 ntBASIC4.97□□□□□ -1.61
SNED1Q8TER0 AC004908.3-201ENST00000610248 625 ntBASIC4.97□□□□□ -1.61
SNED1Q8TER0 AP001642.1-201ENST00000624727 2117 ntBASIC4.97□□□□□ -1.61
SNED1Q8TER0 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.97□□□□□ -1.61
SNED1Q8TER0 AC106858.1-201ENST00000637497 429 ntBASIC4.97□□□□□ -1.61
SNED1Q8TER0 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.61
SNED1Q8TER0 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
SNED1Q8TER0 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SNED1Q8TER0 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SNED1Q8TER0 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.96□□□□□ -1.62
SNED1Q8TER0 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SNED1Q8TER0 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
SNED1Q8TER0 AC021242.1-201ENST00000507315 2035 ntBASIC4.96□□□□□ -1.62
SNED1Q8TER0 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC4.96□□□□□ -1.62
SNED1Q8TER0 MIR30B-201ENST00000384850 88 ntBASIC4.96□□□□□ -1.62
SNED1Q8TER0 SNORA57.3-201ENST00000411095 141 ntBASIC4.96□□□□□ -1.62
SNED1Q8TER0 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC4.96□□□□□ -1.62
SNED1Q8TER0 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.96□□□□□ -1.62
SNED1Q8TER0 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.96□□□□□ -1.62
SNED1Q8TER0 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.96□□□□□ -1.62
SNED1Q8TER0 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.96□□□□□ -1.62
SNED1Q8TER0 AL513343.1-201ENST00000451818 792 ntBASIC4.96□□□□□ -1.62
SNED1Q8TER0 snoU13.24-201ENST00000458998 104 ntBASIC4.96□□□□□ -1.62
SNED1Q8TER0 RPL23AP65-201ENST00000475608 468 ntBASIC4.96□□□□□ -1.62
SNED1Q8TER0 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC4.96□□□□□ -1.62
SNED1Q8TER0 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC4.96□□□□□ -1.62
SNED1Q8TER0 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.96□□□□□ -1.62
SNED1Q8TER0 RNU6-415P-201ENST00000516252 97 ntBASIC4.96□□□□□ -1.62
SNED1Q8TER0 IGKV2D-19-201ENST00000523346 262 ntBASIC4.96□□□□□ -1.62
SNED1Q8TER0 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.96□□□□□ -1.62
SNED1Q8TER0 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SNED1Q8TER0 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.96□□□□□ -1.62
SNED1Q8TER0 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.96□□□□□ -1.62
SNED1Q8TER0 AC019278.1-201ENST00000623516 479 ntBASIC4.96□□□□□ -1.62
SNED1Q8TER0 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
SNED1Q8TER0 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SNED1Q8TER0 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.95□□□□□ -1.62
SNED1Q8TER0 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
SNED1Q8TER0 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SNED1Q8TER0 AC126323.6-202ENST00000568092 3511 ntBASIC4.95□□□□□ -1.62
SNED1Q8TER0 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.95□□□□□ -1.62
SNED1Q8TER0 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SNED1Q8TER0 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.95□□□□□ -1.62
SNED1Q8TER0 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SNED1Q8TER0 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
SNED1Q8TER0 SNORA60-201ENST00000362396 134 ntBASIC4.95□□□□□ -1.62
SNED1Q8TER0 MIR483-201ENST00000385070 76 ntBASIC4.95□□□□□ -1.62
SNED1Q8TER0 MIR195-201ENST00000385194 87 ntBASIC4.95□□□□□ -1.62
SNED1Q8TER0 RPL21P17-201ENST00000397467 475 ntBASIC4.95□□□□□ -1.62
SNED1Q8TER0 SNORA79B-201ENST00000410557 148 ntBASIC4.95□□□□□ -1.62
SNED1Q8TER0 MTND2P25-201ENST00000449028 610 ntBASIC4.95□□□□□ -1.62
SNED1Q8TER0 FCF1P7-201ENST00000451185 558 ntBASIC4.95□□□□□ -1.62
SNED1Q8TER0 AC092691.2-201ENST00000461787 803 ntBASIC4.95□□□□□ -1.62
SNED1Q8TER0 RN7SL323P-201ENST00000494712 295 ntBASIC4.95□□□□□ -1.62
SNED1Q8TER0 AP000926.3-201ENST00000497201 299 ntBASIC4.95□□□□□ -1.62
SNED1Q8TER0 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.95□□□□□ -1.62
SNED1Q8TER0 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.95□□□□□ -1.62
SNED1Q8TER0 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.95□□□□□ -1.62
SNED1Q8TER0 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.95□□□□□ -1.62
SNED1Q8TER0 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.95□□□□□ -1.62
SNED1Q8TER0 SOD1P3-201ENST00000518682 454 ntBASIC4.95□□□□□ -1.62
SNED1Q8TER0 OR4A2P-201ENST00000527276 913 ntBASIC4.95□□□□□ -1.62
SNED1Q8TER0 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.95□□□□□ -1.62
SNED1Q8TER0 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.95□□□□□ -1.62
SNED1Q8TER0 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.95□□□□□ -1.62
SNED1Q8TER0 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SNED1Q8TER0 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
SNED1Q8TER0 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
SNED1Q8TER0 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.95□□□□□ -1.62
SNED1Q8TER0 AL049634.3-201ENST00000604968 457 ntBASIC4.95□□□□□ -1.62
SNED1Q8TER0 AC026979.4-201ENST00000606555 645 ntBASIC4.95□□□□□ -1.62
SNED1Q8TER0 AL451049.1-201ENST00000608672 497 ntBASIC4.95□□□□□ -1.62
SNED1Q8TER0 AC019176.2-201ENST00000611579 315 ntBASIC4.95□□□□□ -1.62
SNED1Q8TER0 AP005212.4-201ENST00000614206 710 ntBASIC4.95□□□□□ -1.62
SNED1Q8TER0 AC107905.1-201ENST00000616204 426 ntBASIC4.95□□□□□ -1.62
SNED1Q8TER0 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC4.95□□□□□ -1.62
SNED1Q8TER0 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms