Protein–RNA interactions for Protein: Q8N4P3

HDDC3, Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3Q8N4P3 AC125257.1-201ENST00000560400 2930 ntBASIC4.57□□□□□ -1.68
HDDC3Q8N4P3 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
HDDC3Q8N4P3 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HDDC3Q8N4P3 AL122126.1-201ENST00000546905 1318 ntBASIC4.57□□□□□ -1.68
HDDC3Q8N4P3 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HDDC3Q8N4P3 AL121657.1-201ENST00000327215 531 ntBASIC4.57□□□□□ -1.68
HDDC3Q8N4P3 HSPD1P16-201ENST00000402302 394 ntBASIC4.57□□□□□ -1.68
HDDC3Q8N4P3 MTND3P20-201ENST00000407663 186 ntBASIC4.57□□□□□ -1.68
HDDC3Q8N4P3 RNU6-628P-201ENST00000410675 107 ntBASIC4.57□□□□□ -1.68
HDDC3Q8N4P3 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC4.57□□□□□ -1.68
HDDC3Q8N4P3 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.57□□□□□ -1.68
HDDC3Q8N4P3 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.57□□□□□ -1.68
HDDC3Q8N4P3 RAD23BP1-201ENST00000421404 1227 ntBASIC4.57□□□□□ -1.68
HDDC3Q8N4P3 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.57□□□□□ -1.68
HDDC3Q8N4P3 AP001324.1-201ENST00000428553 399 ntBASIC4.57□□□□□ -1.68
HDDC3Q8N4P3 DYNLL1P7-201ENST00000429273 258 ntBASIC4.57□□□□□ -1.68
HDDC3Q8N4P3 MTND4LP7-201ENST00000431728 294 ntBASIC4.57□□□□□ -1.68
HDDC3Q8N4P3 AL031584.1-201ENST00000447169 754 ntBASIC4.57□□□□□ -1.68
HDDC3Q8N4P3 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.57□□□□□ -1.68
HDDC3Q8N4P3 AL935212.3-201ENST00000450729 284 ntBASIC4.57□□□□□ -1.68
HDDC3Q8N4P3 RPL37P3-201ENST00000456825 293 ntBASIC4.57□□□□□ -1.68
HDDC3Q8N4P3 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.57□□□□□ -1.68
HDDC3Q8N4P3 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.57□□□□□ -1.68
HDDC3Q8N4P3 OR4A2P-201ENST00000527276 913 ntBASIC4.57□□□□□ -1.68
HDDC3Q8N4P3 AP000827.1-201ENST00000527814 258 ntBASIC4.57□□□□□ -1.68
HDDC3Q8N4P3 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.57□□□□□ -1.68
HDDC3Q8N4P3 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.57□□□□□ -1.68
HDDC3Q8N4P3 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.57□□□□□ -1.68
HDDC3Q8N4P3 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.57□□□□□ -1.68
HDDC3Q8N4P3 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HDDC3Q8N4P3 AC034105.4-201ENST00000568304 277 ntBASIC4.57□□□□□ -1.68
HDDC3Q8N4P3 AGGF1P6-201ENST00000569213 976 ntBASIC4.57□□□□□ -1.68
HDDC3Q8N4P3 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.57□□□□□ -1.68
HDDC3Q8N4P3 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.57□□□□□ -1.68
HDDC3Q8N4P3 AL355802.4-201ENST00000607635 548 ntBASIC4.57□□□□□ -1.68
HDDC3Q8N4P3 LINC00901.1-201ENST00000617252 152 ntBASIC4.57□□□□□ -1.68
HDDC3Q8N4P3 AC022106.2-201ENST00000620114 757 ntBASIC4.57□□□□□ -1.68
HDDC3Q8N4P3 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.57□□□□□ -1.68
HDDC3Q8N4P3 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HDDC3Q8N4P3 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HDDC3Q8N4P3 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HDDC3Q8N4P3 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.56□□□□□ -1.68
HDDC3Q8N4P3 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.56□□□□□ -1.68
HDDC3Q8N4P3 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.56□□□□□ -1.68
HDDC3Q8N4P3 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
HDDC3Q8N4P3 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HDDC3Q8N4P3 SNORD51.1-201ENST00000365405 77 ntBASIC4.56□□□□□ -1.68
HDDC3Q8N4P3 RNU6-1279P-201ENST00000383917 103 ntBASIC4.56□□□□□ -1.68
HDDC3Q8N4P3 TMSB10P2-201ENST00000416049 131 ntBASIC4.56□□□□□ -1.68
HDDC3Q8N4P3 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.56□□□□□ -1.68
HDDC3Q8N4P3 MTND5P8-201ENST00000449817 1083 ntBASIC4.56□□□□□ -1.68
HDDC3Q8N4P3 RHEBP2-201ENST00000450289 600 ntBASIC4.56□□□□□ -1.68
HDDC3Q8N4P3 RPS20P4-201ENST00000461659 355 ntBASIC4.56□□□□□ -1.68
HDDC3Q8N4P3 AC020890.1-201ENST00000491837 504 ntBASIC4.56□□□□□ -1.68
HDDC3Q8N4P3 RPL30P11-201ENST00000495304 339 ntBASIC4.56□□□□□ -1.68
HDDC3Q8N4P3 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.56□□□□□ -1.68
HDDC3Q8N4P3 AC138938.1-201ENST00000515431 782 ntBASIC4.56□□□□□ -1.68
HDDC3Q8N4P3 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.56□□□□□ -1.68
HDDC3Q8N4P3 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.56□□□□□ -1.68
HDDC3Q8N4P3 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.56□□□□□ -1.68
HDDC3Q8N4P3 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
HDDC3Q8N4P3 AC025260.1-201ENST00000548858 430 ntBASIC4.56□□□□□ -1.68
HDDC3Q8N4P3 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.56□□□□□ -1.68
HDDC3Q8N4P3 PSMB7P1-201ENST00000556349 514 ntBASIC4.56□□□□□ -1.68
HDDC3Q8N4P3 ABI1P1-201ENST00000603375 1120 ntBASIC4.56□□□□□ -1.68
HDDC3Q8N4P3 MIR8069-1-201ENST00000616627 86 ntBASIC4.56□□□□□ -1.68
HDDC3Q8N4P3 AC025016.1-201ENST00000616746 682 ntBASIC4.56□□□□□ -1.68
HDDC3Q8N4P3 AL445567.2-201ENST00000618935 498 ntBASIC4.56□□□□□ -1.68
HDDC3Q8N4P3 MIR8069-2-201ENST00000621412 86 ntBASIC4.56□□□□□ -1.68
HDDC3Q8N4P3 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
HDDC3Q8N4P3 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HDDC3Q8N4P3 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.56□□□□□ -1.68
HDDC3Q8N4P3 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HDDC3Q8N4P3 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HDDC3Q8N4P3 AC083843.3-201ENST00000623679 2186 ntBASIC4.55□□□□□ -1.68
HDDC3Q8N4P3 AC027290.2-201ENST00000623210 18662 ntBASIC4.55□□□□□ -1.68
HDDC3Q8N4P3 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HDDC3Q8N4P3 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HDDC3Q8N4P3 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
HDDC3Q8N4P3 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HDDC3Q8N4P3 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
HDDC3Q8N4P3 HMGB1P10-201ENST00000395823 563 ntBASIC4.55□□□□□ -1.68
HDDC3Q8N4P3 AL450992.3-201ENST00000413192 568 ntBASIC4.55□□□□□ -1.68
HDDC3Q8N4P3 RPL21P108-201ENST00000413857 481 ntBASIC4.55□□□□□ -1.68
HDDC3Q8N4P3 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.55□□□□□ -1.68
HDDC3Q8N4P3 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.55□□□□□ -1.68
HDDC3Q8N4P3 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.55□□□□□ -1.68
HDDC3Q8N4P3 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.55□□□□□ -1.68
HDDC3Q8N4P3 AC097499.1-201ENST00000444277 208 ntBASIC4.55□□□□□ -1.68
HDDC3Q8N4P3 MRPL48P1-201ENST00000445390 636 ntBASIC4.55□□□□□ -1.68
HDDC3Q8N4P3 AC104651.2-201ENST00000447549 528 ntBASIC4.55□□□□□ -1.68
HDDC3Q8N4P3 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.55□□□□□ -1.68
HDDC3Q8N4P3 AL513343.1-201ENST00000451818 792 ntBASIC4.55□□□□□ -1.68
HDDC3Q8N4P3 AL591473.1-201ENST00000464297 313 ntBASIC4.55□□□□□ -1.68
HDDC3Q8N4P3 AC034236.1-201ENST00000469891 373 ntBASIC4.55□□□□□ -1.68
HDDC3Q8N4P3 UQCRHP4-201ENST00000471686 272 ntBASIC4.55□□□□□ -1.68
HDDC3Q8N4P3 AC105137.1-201ENST00000484355 562 ntBASIC4.55□□□□□ -1.68
HDDC3Q8N4P3 AC091167.1-201ENST00000492017 396 ntBASIC4.55□□□□□ -1.68
HDDC3Q8N4P3 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC4.55□□□□□ -1.68
HDDC3Q8N4P3 PARP4P3-201ENST00000510265 317 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms