Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 LYPLA1P1-201ENST00000434514 622 ntBASIC6.51□□□□□ -1.37
DEPDC4Q8N2C3 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC6.51□□□□□ -1.37
DEPDC4Q8N2C3 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC6.51□□□□□ -1.37
DEPDC4Q8N2C3 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.51□□□□□ -1.37
DEPDC4Q8N2C3 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC6.51□□□□□ -1.37
DEPDC4Q8N2C3 Y_RNA.631-201ENST00000459607 101 ntBASIC6.51□□□□□ -1.37
DEPDC4Q8N2C3 PLGLA-201ENST00000465668 449 ntBASIC6.51□□□□□ -1.37
DEPDC4Q8N2C3 MRPL49P1-201ENST00000505951 535 ntBASIC6.51□□□□□ -1.37
DEPDC4Q8N2C3 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC6.51□□□□□ -1.37
DEPDC4Q8N2C3 FAM206BP-201ENST00000510179 541 ntBASIC6.51□□□□□ -1.37
DEPDC4Q8N2C3 FTH1P21-201ENST00000512179 511 ntBASIC6.51□□□□□ -1.37
DEPDC4Q8N2C3 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC6.51□□□□□ -1.37
DEPDC4Q8N2C3 IGHVIII-11-1-201ENST00000522733 267 ntBASIC6.51□□□□□ -1.37
DEPDC4Q8N2C3 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC6.51□□□□□ -1.37
DEPDC4Q8N2C3 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC6.51□□□□□ -1.37
DEPDC4Q8N2C3 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC6.51□□□□□ -1.37
DEPDC4Q8N2C3 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC6.51□□□□□ -1.37
DEPDC4Q8N2C3 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC6.51□□□□□ -1.37
DEPDC4Q8N2C3 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC6.51□□□□□ -1.37
DEPDC4Q8N2C3 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC6.51□□□□□ -1.37
DEPDC4Q8N2C3 AL132640.2-202ENST00000559732 614 ntBASIC6.51□□□□□ -1.37
DEPDC4Q8N2C3 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC6.51□□□□□ -1.37
DEPDC4Q8N2C3 OR4K8P-201ENST00000578842 1048 ntBASIC6.51□□□□□ -1.37
DEPDC4Q8N2C3 AC087575.1-201ENST00000585087 229 ntBASIC6.51□□□□□ -1.37
DEPDC4Q8N2C3 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC6.51□□□□□ -1.37
DEPDC4Q8N2C3 AC005191.1-201ENST00000603950 358 ntBASIC6.51□□□□□ -1.37
DEPDC4Q8N2C3 AC111186.1-201ENST00000604684 130 ntBASIC6.51□□□□□ -1.37
DEPDC4Q8N2C3 AL121655.1-201ENST00000605811 308 ntBASIC6.51□□□□□ -1.37
DEPDC4Q8N2C3 Z98200.1-201ENST00000607298 470 ntBASIC6.51□□□□□ -1.37
DEPDC4Q8N2C3 AC103710.3-201ENST00000608157 948 ntBASIC6.51□□□□□ -1.37
DEPDC4Q8N2C3 AC027506.1-201ENST00000621395 198 ntBASIC6.51□□□□□ -1.37
DEPDC4Q8N2C3 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC6.51□□□□□ -1.37
DEPDC4Q8N2C3 AC073488.7-201ENST00000633785 778 ntBASIC6.51□□□□□ -1.37
DEPDC4Q8N2C3 AC129915.3-201ENST00000634128 948 ntBASIC6.51□□□□□ -1.37
DEPDC4Q8N2C3 ATM-230ENST00000640388 578 ntTSL 5 BASIC6.51□□□□□ -1.37
DEPDC4Q8N2C3 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
DEPDC4Q8N2C3 CTNNA1P1-201ENST00000515849 2728 ntBASIC6.51□□□□□ -1.37
DEPDC4Q8N2C3 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC6.51□□□□□ -1.37
DEPDC4Q8N2C3 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
DEPDC4Q8N2C3 AC005618.1-201ENST00000606901 3148 ntBASIC6.51□□□□□ -1.37
DEPDC4Q8N2C3 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 AL139276.1-201ENST00000311910 1001 ntBASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 RNA5SP333-201ENST00000363466 118 ntBASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 Y_RNA.145-201ENST00000363527 102 ntBASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 RNA5SP512-201ENST00000364550 120 ntBASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 RNA5SP334-201ENST00000364825 118 ntBASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 RNU6-1297P-201ENST00000384415 104 ntBASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 MIR558-201ENST00000384920 94 ntBASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 AL359634.1-202ENST00000404721 284 ntBASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 RN7SKP236-201ENST00000410635 284 ntBASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 RN7SKP30-201ENST00000411373 334 ntBASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 AL161631.1-201ENST00000417933 486 ntBASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 ARL5AP1-201ENST00000418991 388 ntBASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 RPSAP1-201ENST00000421328 880 ntBASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 MED13P1-201ENST00000428342 171 ntBASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 BX679664.2-201ENST00000439282 283 ntBASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 AL031681.1-201ENST00000443304 400 ntBASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 CFL1P4-201ENST00000451536 498 ntBASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 AC104308.1-201ENST00000454621 333 ntBASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 AC108059.3-201ENST00000456388 214 ntBASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 AL049714.1-201ENST00000466686 347 ntBASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 RN7SL797P-201ENST00000486314 297 ntBASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 AC090096.1-201ENST00000489168 390 ntBASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 AC008496.1-201ENST00000509131 295 ntBASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 Y_RNA.665-201ENST00000516177 98 ntBASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 RN7SKP219-201ENST00000516825 296 ntBASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 SNORA25.17-201ENST00000517184 124 ntBASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 MRPS16P1-201ENST00000523462 412 ntBASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 AL352979.3-201ENST00000553515 247 ntBASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC6.5□□□□□ -1.37
DEPDC4Q8N2C3 SULT1C2P2-201ENST00000562517 294 ntBASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms