| CNTN4 | Q8IWV2 | EMSY-215 | ENST00000533248 | 3798 nt | TSL 1 (best) BASIC | 4.42 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | DCDC1-211 | ENST00000597505 | 5352 nt | APPRIS ALT2 TSL 5 BASIC | 4.42 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | CNGA1-209 | ENST00000544810 | 2722 nt | APPRIS ALT2 TSL 5 BASIC | 4.42 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | IMPG2-201 | ENST00000193391 | 8337 nt | APPRIS P1 TSL 1 (best) BASIC | 4.42 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | AC015813.1-202 | ENST00000577267 | 4056 nt | TSL 2 BASIC | 4.42 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | FAM26F-203 | ENST00000368606 | 546 nt | TSL 3 BASIC | 4.42 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | SNORA51.12-201 | ENST00000384448 | 134 nt | BASIC | 4.42 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | DEFB133-201 | ENST00000398721 | 186 nt | APPRIS P1 TSL 1 (best) BASIC | 4.42 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | GLULP6-201 | ENST00000399502 | 913 nt | BASIC | 4.42 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | AC136624.1-201 | ENST00000400791 | 413 nt | BASIC | 4.42 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | RN7SKP106-201 | ENST00000410832 | 272 nt | BASIC | 4.42 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | RNU2-6P-201 | ENST00000411404 | 190 nt | BASIC | 4.42 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | AL133480.1-201 | ENST00000411561 | 638 nt | TSL 2 BASIC | 4.42 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | TTTY17A-201 | ENST00000416110 | 166 nt | TSL 1 (best) BASIC | 4.42 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | TTTY17C-201 | ENST00000421387 | 166 nt | TSL 1 (best) BASIC | 4.42 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | RPS12P10-201 | ENST00000427031 | 377 nt | BASIC | 4.42 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | AC005828.1-201 | ENST00000431604 | 524 nt | TSL 5 BASIC | 4.42 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | UBE2V1P3-201 | ENST00000439651 | 417 nt | BASIC | 4.42 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | TTTY17B-201 | ENST00000441906 | 166 nt | TSL 1 (best) BASIC | 4.42 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | LINC00412-201 | ENST00000444744 | 420 nt | TSL 2 BASIC | 4.42 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | LINC01034-201 | ENST00000448806 | 277 nt | TSL 3 BASIC | 4.42 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | CEACAMP6-201 | ENST00000452007 | 574 nt | BASIC | 4.42 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | LINC01753-201 | ENST00000458145 | 631 nt | TSL 3 BASIC | 4.42 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | TOPORSLP1-202 | ENST00000469756 | 969 nt | TSL 3 BASIC | 4.42 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | CD200R1-205 | ENST00000490004 | 778 nt | TSL 1 (best) BASIC | 4.42 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | PDCD10-216 | ENST00000492396 | 814 nt | TSL 5 BASIC | 4.42 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | MRPS33-209 | ENST00000496958 | 688 nt | APPRIS P1 TSL 3 BASIC | 4.42 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | AC105233.1-201 | ENST00000498840 | 781 nt | BASIC | 4.42 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | HOMER1-204 | ENST00000508576 | 815 nt | TSL 1 (best) BASIC | 4.42 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | AC025768.1-201 | ENST00000510057 | 267 nt | BASIC | 4.42 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | RN7SKP283-201 | ENST00000517197 | 270 nt | BASIC | 4.42 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | AC120193.1-201 | ENST00000518988 | 741 nt | TSL 2 BASIC | 4.42 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | AC024341.1-201 | ENST00000526444 | 1552 nt | BASIC | 4.42 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | AP001781.1-201 | ENST00000530977 | 207 nt | BASIC | 4.42 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | AC055878.1-201 | ENST00000531858 | 281 nt | TSL 3 BASIC | 4.42 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | AC022081.1-201 | ENST00000537327 | 433 nt | TSL 2 BASIC | 4.42 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | C8orf59-206 | ENST00000545322 | 491 nt | TSL 3 BASIC | 4.42 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | AL133371.2-201 | ENST00000556624 | 294 nt | TSL 3 BASIC | 4.42 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | AC009039.1-201 | ENST00000568711 | 471 nt | TSL 4 BASIC | 4.42 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | DAB1-AS1-208 | ENST00000586465 | 748 nt | TSL 5 BASIC | 4.42 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | ZNF540-204 | ENST00000586792 | 564 nt | TSL 3 BASIC | 4.42 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | AL109935.2-201 | ENST00000587737 | 395 nt | TSL 5 BASIC | 4.42 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | ZNF92P2-201 | ENST00000600543 | 1059 nt | BASIC | 4.42 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | AC004948.1-201 | ENST00000609858 | 672 nt | BASIC | 4.42 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | AL136295.6-201 | ENST00000610486 | 658 nt | BASIC | 4.42 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | AC006065.6-201 | ENST00000625201 | 545 nt | BASIC | 4.42 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | U6.107-201 | ENST00000637108 | 79 nt | BASIC | 4.42 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | ZNF345-216 | ENST00000640438 | 963 nt | TSL 5 BASIC | 4.42 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | LINC01808-202 | ENST00000641680 | 1116 nt | BASIC | 4.42 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | AL136964.1-201 | ENST00000622038 | 2990 nt | BASIC | 4.42 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | RGS21-201 | ENST00000417209 | 1794 nt | APPRIS P1 TSL 1 (best) BASIC | 4.42 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | WDFY3-201 | ENST00000295888 | 14247 nt | APPRIS P1 TSL 1 (best) BASIC | 4.42 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | BCLAF1-202 | ENST00000392348 | 2610 nt | TSL 5 BASIC | 4.42 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | RBMS3-205 | ENST00000434693 | 8540 nt | TSL 5 BASIC | 4.42 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | ZNF780B-202 | ENST00000434248 | 8665 nt | APPRIS P1 TSL 5 BASIC | 4.41 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | ZNF780B-207 | ENST00000617676 | 8664 nt | APPRIS P1 TSL 5 BASIC | 4.41 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | LARP4-202 | ENST00000347328 | 3621 nt | TSL 1 (best) BASIC | 4.41 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | GABPB1-AS1-202 | ENST00000499624 | 16182 nt | TSL 1 (best) BASIC | 4.41 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | RNU6-1279P-201 | ENST00000383917 | 103 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | AC092745.2-202 | ENST00000411880 | 369 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | HMGB3P31-201 | ENST00000413333 | 595 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | LINC01507-201 | ENST00000417801 | 446 nt | TSL 5 BASIC | 4.41 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | LINC02020-202 | ENST00000421006 | 575 nt | TSL 4 BASIC | 4.41 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | IPMKP1-201 | ENST00000425988 | 855 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | AC073335.1-201 | ENST00000427776 | 363 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | AC016912.1-201 | ENST00000432241 | 545 nt | TSL 3 BASIC | 4.41 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | RPL12P3-201 | ENST00000440080 | 396 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | AL162591.2-201 | ENST00000449634 | 317 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | ABCF2P2-201 | ENST00000450549 | 296 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | AL035407.2-201 | ENST00000454090 | 378 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | AC079804.1-201 | ENST00000461922 | 436 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | ARHGEF3-AS1-201 | ENST00000477246 | 489 nt | TSL 2 BASIC | 4.41 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | F11-205 | ENST00000492972 | 1204 nt | TSL 2 BASIC | 4.41 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | AC016687.2-201 | ENST00000504795 | 541 nt | TSL 5 BASIC | 4.41 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | MTND3P24-201 | ENST00000506306 | 329 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | PPBPP1-201 | ENST00000510807 | 373 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | AC109830.1-202 | ENST00000515491 | 860 nt | TSL 1 (best) BASIC | 4.41 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | AC009509.2-201 | ENST00000538640 | 429 nt | TSL 2 BASIC | 4.41 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | AC074029.1-201 | ENST00000552531 | 1044 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | AL358333.1-201 | ENST00000555115 | 467 nt | TSL 3 BASIC | 4.41 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | GLRXP2-201 | ENST00000555594 | 321 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | MIR4436B2-201 | ENST00000581415 | 91 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | AC090844.2-203 | ENST00000582263 | 632 nt | TSL 5 BASIC | 4.41 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | MIR4436B1-201 | ENST00000583272 | 91 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | AC010649.1-203 | ENST00000592230 | 454 nt | TSL 2 BASIC | 4.41 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | AC020634.1-201 | ENST00000608701 | 549 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | AL133243.1-201 | ENST00000614487 | 366 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | PDCD6IPP1-202 | ENST00000622242 | 1064 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | OR52N4-202 | ENST00000641350 | 1276 nt | APPRIS P1 BASIC | 4.41 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | CACNB4-273 | ENST00000638091 | 4061 nt | TSL 5 BASIC | 4.41 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | C12orf50-203 | ENST00000550553 | 1525 nt | TSL 5 BASIC | 4.41 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | SLC17A3-204 | ENST00000397060 | 2052 nt | APPRIS P1 TSL 2 BASIC | 4.41 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | MAP3K19-201 | ENST00000358371 | 3719 nt | TSL 1 (best) BASIC | 4.41 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | RBBP6-202 | ENST00000348022 | 5739 nt | TSL 1 (best) BASIC | 4.4 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | LUZP2-207 | ENST00000533227 | 5016 nt | TSL 1 (best) BASIC | 4.4 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | KIAA0586-202 | ENST00000354386 | 5226 nt | APPRIS ALT2 TSL 2 BASIC | 4.4 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | ADAMTS9-AS1-203 | ENST00000471990 | 1606 nt | TSL 2 BASIC | 4.4 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | DOCK7-211 | ENST00000634264 | 6303 nt | APPRIS ALT2 TSL 5 BASIC | 4.4 | □□□□□ -1.7 | | |
| CNTN4 | Q8IWV2 | CLEC7A-202 | ENST00000304084 | 1130 nt | APPRIS ALT1 TSL 1 (best) BASIC | 4.4 | □□□□□ -1.71 | | |
| CNTN4 | Q8IWV2 | RNU1-15P-201 | ENST00000353977 | 144 nt | BASIC | 4.4 | □□□□□ -1.71 | | |