Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC2.94□□□□□ -1.94
SCXQ7RTU7 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC2.94□□□□□ -1.94
SCXQ7RTU7 RPL30P11-201ENST00000495304 339 ntBASIC2.94□□□□□ -1.94
SCXQ7RTU7 MTATP6P22-201ENST00000507369 598 ntBASIC2.94□□□□□ -1.94
SCXQ7RTU7 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC2.94□□□□□ -1.94
SCXQ7RTU7 IGLVIV-65-201ENST00000517313 360 ntBASIC2.94□□□□□ -1.94
SCXQ7RTU7 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC2.94□□□□□ -1.94
SCXQ7RTU7 CYCSP28-201ENST00000534284 321 ntBASIC2.94□□□□□ -1.94
SCXQ7RTU7 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC2.94□□□□□ -1.94
SCXQ7RTU7 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC2.94□□□□□ -1.94
SCXQ7RTU7 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
SCXQ7RTU7 KPNA2P3-201ENST00000584190 848 ntBASIC2.94□□□□□ -1.94
SCXQ7RTU7 SLC25A36P1-201ENST00000590111 465 ntBASIC2.94□□□□□ -1.94
SCXQ7RTU7 AC025946.2-201ENST00000603398 234 ntBASIC2.94□□□□□ -1.94
SCXQ7RTU7 AC103792.1-201ENST00000603591 919 ntBASIC2.94□□□□□ -1.94
SCXQ7RTU7 AC005191.1-201ENST00000603950 358 ntBASIC2.94□□□□□ -1.94
SCXQ7RTU7 AC135803.1-201ENST00000608748 565 ntBASIC2.94□□□□□ -1.94
SCXQ7RTU7 AL713922.2-201ENST00000619384 716 ntBASIC2.94□□□□□ -1.94
SCXQ7RTU7 AC006453.5-201ENST00000636451 619 ntBASIC2.94□□□□□ -1.94
SCXQ7RTU7 METTL8-218ENST00000638989 876 ntTSL 5 BASIC2.94□□□□□ -1.94
SCXQ7RTU7 METTL8-219ENST00000640734 726 ntTSL 2 BASIC2.94□□□□□ -1.94
SCXQ7RTU7 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC2.94□□□□□ -1.94
SCXQ7RTU7 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC2.94□□□□□ -1.94
SCXQ7RTU7 CARF-203ENST00000414439 2099 ntTSL 2 BASIC2.94□□□□□ -1.94
SCXQ7RTU7 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
SCXQ7RTU7 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC2.94□□□□□ -1.94
SCXQ7RTU7 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SCXQ7RTU7 AP001002.1-201ENST00000625148 1513 ntBASIC2.93□□□□□ -1.94
SCXQ7RTU7 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SCXQ7RTU7 EOGT-210ENST00000615922 1931 ntBASIC2.93□□□□□ -1.94
SCXQ7RTU7 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SCXQ7RTU7 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
SCXQ7RTU7 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
SCXQ7RTU7 AC068254.2-201ENST00000623938 3577 ntBASIC2.93□□□□□ -1.94
SCXQ7RTU7 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SCXQ7RTU7 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SCXQ7RTU7 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SCXQ7RTU7 RNA5SP52-201ENST00000362448 134 ntBASIC2.93□□□□□ -1.94
SCXQ7RTU7 RNA5SP509-201ENST00000364577 119 ntBASIC2.93□□□□□ -1.94
SCXQ7RTU7 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC2.93□□□□□ -1.94
SCXQ7RTU7 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
SCXQ7RTU7 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SCXQ7RTU7 AL160275.2-201ENST00000412010 394 ntBASIC2.93□□□□□ -1.94
SCXQ7RTU7 AC092832.1-201ENST00000422934 400 ntBASIC2.93□□□□□ -1.94
SCXQ7RTU7 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC2.93□□□□□ -1.94
SCXQ7RTU7 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC2.93□□□□□ -1.94
SCXQ7RTU7 RSL24D1P6-201ENST00000426934 401 ntBASIC2.93□□□□□ -1.94
SCXQ7RTU7 AC023141.6-201ENST00000429418 337 ntBASIC2.93□□□□□ -1.94
SCXQ7RTU7 ARL6IP1P2-201ENST00000431356 563 ntBASIC2.93□□□□□ -1.94
SCXQ7RTU7 CBX1P1-201ENST00000440184 427 ntBASIC2.93□□□□□ -1.94
SCXQ7RTU7 MTCYBP12-201ENST00000440559 1134 ntBASIC2.93□□□□□ -1.94
SCXQ7RTU7 NDUFAF4P3-201ENST00000456468 525 ntBASIC2.93□□□□□ -1.94
SCXQ7RTU7 RPL23AP24-201ENST00000458203 385 ntBASIC2.93□□□□□ -1.94
SCXQ7RTU7 SNORD108-201ENST00000459332 71 ntBASIC2.93□□□□□ -1.94
SCXQ7RTU7 RPL21P126-201ENST00000470049 478 ntBASIC2.93□□□□□ -1.94
SCXQ7RTU7 AC103987.1-201ENST00000473394 348 ntBASIC2.93□□□□□ -1.94
SCXQ7RTU7 AC087385.1-201ENST00000475062 312 ntBASIC2.93□□□□□ -1.94
SCXQ7RTU7 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC2.93□□□□□ -1.94
SCXQ7RTU7 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC2.93□□□□□ -1.94
SCXQ7RTU7 PANCR-201ENST00000503456 493 ntTSL 5 BASIC2.93□□□□□ -1.94
SCXQ7RTU7 FTH1P24-201ENST00000503502 462 ntBASIC2.93□□□□□ -1.94
SCXQ7RTU7 AC091917.2-201ENST00000505002 744 ntBASIC2.93□□□□□ -1.94
SCXQ7RTU7 AC098799.3-201ENST00000506095 438 ntBASIC2.93□□□□□ -1.94
SCXQ7RTU7 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC2.93□□□□□ -1.94
SCXQ7RTU7 AC007016.1-201ENST00000512110 244 ntBASIC2.93□□□□□ -1.94
SCXQ7RTU7 FTH1P9-201ENST00000513251 355 ntBASIC2.93□□□□□ -1.94
SCXQ7RTU7 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC2.93□□□□□ -1.94
SCXQ7RTU7 SNORA70.17-201ENST00000516449 133 ntBASIC2.93□□□□□ -1.94
SCXQ7RTU7 Vault.1-201ENST00000516474 102 ntBASIC2.93□□□□□ -1.94
SCXQ7RTU7 RNA5SP309-201ENST00000516670 106 ntBASIC2.93□□□□□ -1.94
SCXQ7RTU7 AC138701.1-201ENST00000524329 714 ntBASIC2.93□□□□□ -1.94
SCXQ7RTU7 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC2.93□□□□□ -1.94
SCXQ7RTU7 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC2.93□□□□□ -1.94
SCXQ7RTU7 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SCXQ7RTU7 RFPL1S-203ENST00000539579 330 ntBASIC2.93□□□□□ -1.94
SCXQ7RTU7 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC2.93□□□□□ -1.94
SCXQ7RTU7 MTND6P33-201ENST00000571794 183 ntBASIC2.93□□□□□ -1.94
SCXQ7RTU7 AL121834.1-201ENST00000572284 509 ntBASIC2.93□□□□□ -1.94
SCXQ7RTU7 AL590392.1-201ENST00000604960 446 ntBASIC2.93□□□□□ -1.94
SCXQ7RTU7 AC090525.3-201ENST00000605601 189 ntBASIC2.93□□□□□ -1.94
SCXQ7RTU7 AP003117.2-201ENST00000606010 545 ntBASIC2.93□□□□□ -1.94
SCXQ7RTU7 AL121890.3-201ENST00000618494 516 ntBASIC2.93□□□□□ -1.94
SCXQ7RTU7 PDCD6IPP1-202ENST00000622242 1064 ntBASIC2.93□□□□□ -1.94
SCXQ7RTU7 C2orf27A-204ENST00000623058 969 ntBASIC2.93□□□□□ -1.94
SCXQ7RTU7 AC007342.8-201ENST00000623278 678 ntBASIC2.93□□□□□ -1.94
SCXQ7RTU7 CR392039.4-201ENST00000624968 501 ntBASIC2.93□□□□□ -1.94
SCXQ7RTU7 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC2.93□□□□□ -1.94
SCXQ7RTU7 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC2.93□□□□□ -1.94
SCXQ7RTU7 OR52H1-202ENST00000641796 1061 ntBASIC2.93□□□□□ -1.94
SCXQ7RTU7 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
SCXQ7RTU7 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
SCXQ7RTU7 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
SCXQ7RTU7 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
SCXQ7RTU7 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC2.93□□□□□ -1.94
SCXQ7RTU7 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC2.93□□□□□ -1.94
SCXQ7RTU7 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
SCXQ7RTU7 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC2.92□□□□□ -1.94
SCXQ7RTU7 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC2.92□□□□□ -1.94
SCXQ7RTU7 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
SCXQ7RTU7 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms