Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 RNA5SP171-201ENST00000391071 115 ntBASIC4.92□□□□□ -1.62
SHROOM1Q2M3G4 ATP5F1P3-201ENST00000397213 657 ntBASIC4.92□□□□□ -1.62
SHROOM1Q2M3G4 AL359643.1-201ENST00000404109 423 ntBASIC4.92□□□□□ -1.62
SHROOM1Q2M3G4 RNU4-6P-201ENST00000410804 122 ntBASIC4.92□□□□□ -1.62
SHROOM1Q2M3G4 RNU6-564P-201ENST00000410983 104 ntBASIC4.92□□□□□ -1.62
SHROOM1Q2M3G4 RPL23AP25-201ENST00000430973 463 ntBASIC4.92□□□□□ -1.62
SHROOM1Q2M3G4 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.92□□□□□ -1.62
SHROOM1Q2M3G4 AC093716.1-201ENST00000435923 377 ntBASIC4.92□□□□□ -1.62
SHROOM1Q2M3G4 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.92□□□□□ -1.62
SHROOM1Q2M3G4 Z95327.1-201ENST00000446082 482 ntBASIC4.92□□□□□ -1.62
SHROOM1Q2M3G4 CCRL1P1-201ENST00000449542 1053 ntBASIC4.92□□□□□ -1.62
SHROOM1Q2M3G4 RPS20P4-201ENST00000461659 355 ntBASIC4.92□□□□□ -1.62
SHROOM1Q2M3G4 RN7SL132P-201ENST00000478131 296 ntBASIC4.92□□□□□ -1.62
SHROOM1Q2M3G4 RPS29P19-201ENST00000479709 171 ntBASIC4.92□□□□□ -1.62
SHROOM1Q2M3G4 LARP7P4-201ENST00000481075 878 ntBASIC4.92□□□□□ -1.62
SHROOM1Q2M3G4 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.92□□□□□ -1.62
SHROOM1Q2M3G4 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.92□□□□□ -1.62
SHROOM1Q2M3G4 BTG4P1-201ENST00000510421 183 ntBASIC4.92□□□□□ -1.62
SHROOM1Q2M3G4 SNORD116-26-201ENST00000516006 96 ntBASIC4.92□□□□□ -1.62
SHROOM1Q2M3G4 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.92□□□□□ -1.62
SHROOM1Q2M3G4 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.92□□□□□ -1.62
SHROOM1Q2M3G4 HMGB3P26-201ENST00000560051 582 ntBASIC4.92□□□□□ -1.62
SHROOM1Q2M3G4 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.92□□□□□ -1.62
SHROOM1Q2M3G4 MIR4716-201ENST00000579628 84 ntBASIC4.92□□□□□ -1.62
SHROOM1Q2M3G4 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.92□□□□□ -1.62
SHROOM1Q2M3G4 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.92□□□□□ -1.62
SHROOM1Q2M3G4 AC012213.4-201ENST00000606457 354 ntBASIC4.92□□□□□ -1.62
SHROOM1Q2M3G4 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.92□□□□□ -1.62
SHROOM1Q2M3G4 AC006133.1-201ENST00000617106 264 ntBASIC4.92□□□□□ -1.62
SHROOM1Q2M3G4 RMST_5.1-201ENST00000618704 126 ntBASIC4.92□□□□□ -1.62
SHROOM1Q2M3G4 AL133370.2-201ENST00000619934 439 ntBASIC4.92□□□□□ -1.62
SHROOM1Q2M3G4 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.92□□□□□ -1.62
SHROOM1Q2M3G4 AC092159.4-201ENST00000624944 550 ntBASIC4.92□□□□□ -1.62
SHROOM1Q2M3G4 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
SHROOM1Q2M3G4 AL596275.2-204ENST00000641628 552 ntBASIC4.92□□□□□ -1.62
SHROOM1Q2M3G4 AL596275.2-206ENST00000641957 626 ntBASIC4.92□□□□□ -1.62
SHROOM1Q2M3G4 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.92□□□□□ -1.62
SHROOM1Q2M3G4 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.92□□□□□ -1.62
SHROOM1Q2M3G4 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.92□□□□□ -1.62
SHROOM1Q2M3G4 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
SHROOM1Q2M3G4 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
SHROOM1Q2M3G4 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SHROOM1Q2M3G4 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
SHROOM1Q2M3G4 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SHROOM1Q2M3G4 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
SHROOM1Q2M3G4 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.91□□□□□ -1.62
SHROOM1Q2M3G4 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
SHROOM1Q2M3G4 AL133412.1-201ENST00000380194 2992 ntBASIC4.91□□□□□ -1.62
SHROOM1Q2M3G4 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.91□□□□□ -1.62
SHROOM1Q2M3G4 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SHROOM1Q2M3G4 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SHROOM1Q2M3G4 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
SHROOM1Q2M3G4 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
SHROOM1Q2M3G4 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SHROOM1Q2M3G4 AL445189.1-201ENST00000405722 338 ntBASIC4.91□□□□□ -1.62
SHROOM1Q2M3G4 CYCSP10-201ENST00000417973 294 ntBASIC4.91□□□□□ -1.62
SHROOM1Q2M3G4 RPS12P5-201ENST00000423449 371 ntBASIC4.91□□□□□ -1.62
SHROOM1Q2M3G4 AL445584.1-201ENST00000431451 330 ntBASIC4.91□□□□□ -1.62
SHROOM1Q2M3G4 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.91□□□□□ -1.62
SHROOM1Q2M3G4 BMS1P19-201ENST00000433925 393 ntBASIC4.91□□□□□ -1.62
SHROOM1Q2M3G4 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.91□□□□□ -1.62
SHROOM1Q2M3G4 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.91□□□□□ -1.62
SHROOM1Q2M3G4 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.91□□□□□ -1.62
SHROOM1Q2M3G4 RPL31P53-201ENST00000457065 348 ntBASIC4.91□□□□□ -1.62
SHROOM1Q2M3G4 RNA5SP246-201ENST00000458909 119 ntBASIC4.91□□□□□ -1.62
SHROOM1Q2M3G4 RPL21P129-201ENST00000491732 478 ntBASIC4.91□□□□□ -1.62
SHROOM1Q2M3G4 RN7SL604P-201ENST00000492589 296 ntBASIC4.91□□□□□ -1.62
SHROOM1Q2M3G4 ATG10-AS1-201ENST00000504846 648 ntBASIC4.91□□□□□ -1.62
SHROOM1Q2M3G4 KRT19P6-201ENST00000510983 209 ntBASIC4.91□□□□□ -1.62
SHROOM1Q2M3G4 AC022882.1-201ENST00000532142 501 ntBASIC4.91□□□□□ -1.62
SHROOM1Q2M3G4 AC053481.4-201ENST00000583164 216 ntBASIC4.91□□□□□ -1.62
SHROOM1Q2M3G4 MIR3158-1-201ENST00000583596 81 ntBASIC4.91□□□□□ -1.62
SHROOM1Q2M3G4 RN7SL435P-201ENST00000584418 282 ntBASIC4.91□□□□□ -1.62
SHROOM1Q2M3G4 AC245389.1-201ENST00000605141 529 ntBASIC4.91□□□□□ -1.62
SHROOM1Q2M3G4 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.91□□□□□ -1.62
SHROOM1Q2M3G4 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC4.91□□□□□ -1.62
SHROOM1Q2M3G4 OR6R2P-201ENST00000609216 300 ntBASIC4.91□□□□□ -1.62
SHROOM1Q2M3G4 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SHROOM1Q2M3G4 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.91□□□□□ -1.62
SHROOM1Q2M3G4 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
SHROOM1Q2M3G4 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.9□□□□□ -1.62
SHROOM1Q2M3G4 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
SHROOM1Q2M3G4 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
SHROOM1Q2M3G4 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.9□□□□□ -1.62
SHROOM1Q2M3G4 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.9□□□□□ -1.63
SHROOM1Q2M3G4 RNU6-618P-201ENST00000363518 112 ntBASIC4.9□□□□□ -1.63
SHROOM1Q2M3G4 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
SHROOM1Q2M3G4 AC115285.1-201ENST00000424879 736 ntBASIC4.9□□□□□ -1.63
SHROOM1Q2M3G4 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.9□□□□□ -1.63
SHROOM1Q2M3G4 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.9□□□□□ -1.63
SHROOM1Q2M3G4 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.9□□□□□ -1.63
SHROOM1Q2M3G4 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.9□□□□□ -1.63
SHROOM1Q2M3G4 VN1R32P-201ENST00000452234 905 ntBASIC4.9□□□□□ -1.63
SHROOM1Q2M3G4 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.9□□□□□ -1.63
SHROOM1Q2M3G4 AL445433.1-201ENST00000457507 257 ntBASIC4.9□□□□□ -1.63
SHROOM1Q2M3G4 AC022795.1-201ENST00000473808 480 ntBASIC4.9□□□□□ -1.63
SHROOM1Q2M3G4 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.9□□□□□ -1.63
SHROOM1Q2M3G4 RPS4XP15-201ENST00000489210 795 ntBASIC4.9□□□□□ -1.63
SHROOM1Q2M3G4 AC146944.2-203ENST00000502493 354 ntBASIC4.9□□□□□ -1.63
SHROOM1Q2M3G4 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms