Protein–RNA interactions for Protein: Q15853

USF2, Upstream stimulatory factor 2, humanhuman

Predicted RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF2Q15853 FAM35DP-201ENST00000323387 2712 ntBASIC3.63□□□□□ -1.83
USF2Q15853 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.63□□□□□ -1.83
USF2Q15853 AL391684.1-202ENST00000641293 1636 ntBASIC3.62□□□□□ -1.83
USF2Q15853 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
USF2Q15853 AL442639.1-201ENST00000625030 1899 ntBASIC3.62□□□□□ -1.83
USF2Q15853 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
USF2Q15853 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
USF2Q15853 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
USF2Q15853 AC119744.1-201ENST00000454746 1715 ntBASIC3.62□□□□□ -1.83
USF2Q15853 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
USF2Q15853 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.62□□□□□ -1.83
USF2Q15853 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC3.62□□□□□ -1.83
USF2Q15853 RNA5SP123-201ENST00000363244 119 ntBASIC3.62□□□□□ -1.83
USF2Q15853 AL645927.1-201ENST00000396783 406 ntBASIC3.62□□□□□ -1.83
USF2Q15853 HSPE1P26-201ENST00000405341 275 ntBASIC3.62□□□□□ -1.83
USF2Q15853 RN7SKP100-201ENST00000411258 284 ntBASIC3.62□□□□□ -1.83
USF2Q15853 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.62□□□□□ -1.83
USF2Q15853 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC3.62□□□□□ -1.83
USF2Q15853 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.62□□□□□ -1.83
USF2Q15853 AC006455.6-201ENST00000426192 893 ntBASIC3.62□□□□□ -1.83
USF2Q15853 RPS27AP12-201ENST00000429552 465 ntBASIC3.62□□□□□ -1.83
USF2Q15853 RBMY2QP-201ENST00000429799 1147 ntBASIC3.62□□□□□ -1.83
USF2Q15853 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC3.62□□□□□ -1.83
USF2Q15853 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC3.62□□□□□ -1.83
USF2Q15853 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC3.62□□□□□ -1.83
USF2Q15853 NPM1P49-201ENST00000448027 714 ntBASIC3.62□□□□□ -1.83
USF2Q15853 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC3.62□□□□□ -1.83
USF2Q15853 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.62□□□□□ -1.83
USF2Q15853 RPL37P3-201ENST00000456825 293 ntBASIC3.62□□□□□ -1.83
USF2Q15853 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC3.62□□□□□ -1.83
USF2Q15853 AC025164.1-201ENST00000496249 478 ntBASIC3.62□□□□□ -1.83
USF2Q15853 AC078918.1-201ENST00000498515 228 ntBASIC3.62□□□□□ -1.83
USF2Q15853 AC023141.12-201ENST00000512399 199 ntBASIC3.62□□□□□ -1.83
USF2Q15853 BTF3P13-201ENST00000513224 490 ntBASIC3.62□□□□□ -1.83
USF2Q15853 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC3.62□□□□□ -1.83
USF2Q15853 RNU6ATAC24P-201ENST00000516811 135 ntBASIC3.62□□□□□ -1.83
USF2Q15853 AC008694.2-201ENST00000517591 306 ntBASIC3.62□□□□□ -1.83
USF2Q15853 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.62□□□□□ -1.83
USF2Q15853 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC3.62□□□□□ -1.83
USF2Q15853 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC3.62□□□□□ -1.83
USF2Q15853 AC023158.1-201ENST00000561632 1025 ntBASIC3.62□□□□□ -1.83
USF2Q15853 AC008759.1-201ENST00000589783 983 ntBASIC3.62□□□□□ -1.83
USF2Q15853 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.62□□□□□ -1.83
USF2Q15853 ZNF92P3-201ENST00000596594 954 ntBASIC3.62□□□□□ -1.83
USF2Q15853 AC068870.2-201ENST00000620635 389 ntBASIC3.62□□□□□ -1.83
USF2Q15853 AC048347.1-201ENST00000624621 427 ntBASIC3.62□□□□□ -1.83
USF2Q15853 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
USF2Q15853 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC3.62□□□□□ -1.83
USF2Q15853 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
USF2Q15853 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
USF2Q15853 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
USF2Q15853 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC3.61□□□□□ -1.83
USF2Q15853 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
USF2Q15853 AL355852.1-201ENST00000454081 1771 ntBASIC3.61□□□□□ -1.83
USF2Q15853 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC3.61□□□□□ -1.83
USF2Q15853 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
USF2Q15853 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
USF2Q15853 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
USF2Q15853 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
USF2Q15853 OR56B2P-201ENST00000317102 954 ntBASIC3.61□□□□□ -1.83
USF2Q15853 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
USF2Q15853 RNU6-670P-201ENST00000364312 104 ntBASIC3.61□□□□□ -1.83
USF2Q15853 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
USF2Q15853 OR51B3P-201ENST00000412287 913 ntBASIC3.61□□□□□ -1.83
USF2Q15853 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC3.61□□□□□ -1.83
USF2Q15853 AC119751.6-201ENST00000416712 186 ntBASIC3.61□□□□□ -1.83
USF2Q15853 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC3.61□□□□□ -1.83
USF2Q15853 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
USF2Q15853 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC3.61□□□□□ -1.83
USF2Q15853 HLA-N-201ENST00000437516 135 ntBASIC3.61□□□□□ -1.83
USF2Q15853 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.61□□□□□ -1.83
USF2Q15853 MTND2P25-201ENST00000449028 610 ntBASIC3.61□□□□□ -1.83
USF2Q15853 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC3.61□□□□□ -1.83
USF2Q15853 RPS5P7-201ENST00000456664 608 ntBASIC3.61□□□□□ -1.83
USF2Q15853 AC090142.1-201ENST00000465776 462 ntBASIC3.61□□□□□ -1.83
USF2Q15853 RPS20P21-201ENST00000466859 343 ntBASIC3.61□□□□□ -1.83
USF2Q15853 RPL7AP6-201ENST00000477943 801 ntBASIC3.61□□□□□ -1.83
USF2Q15853 AC004453.1-201ENST00000487895 408 ntBASIC3.61□□□□□ -1.83
USF2Q15853 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.61□□□□□ -1.83
USF2Q15853 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC3.61□□□□□ -1.83
USF2Q15853 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC3.61□□□□□ -1.83
USF2Q15853 IGKV2-23-201ENST00000518729 323 ntBASIC3.61□□□□□ -1.83
USF2Q15853 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC3.61□□□□□ -1.83
USF2Q15853 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC3.61□□□□□ -1.83
USF2Q15853 CYP4A43P-201ENST00000568156 121 ntBASIC3.61□□□□□ -1.83
USF2Q15853 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC3.61□□□□□ -1.83
USF2Q15853 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.61□□□□□ -1.83
USF2Q15853 AC209154.1-201ENST00000582156 337 ntBASIC3.61□□□□□ -1.83
USF2Q15853 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.61□□□□□ -1.83
USF2Q15853 AC087763.1-201ENST00000603391 286 ntBASIC3.61□□□□□ -1.83
USF2Q15853 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
USF2Q15853 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC3.61□□□□□ -1.83
USF2Q15853 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
USF2Q15853 AL353746.1-201ENST00000566293 6881 ntBASIC3.61□□□□□ -1.83
USF2Q15853 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.61□□□□□ -1.83
USF2Q15853 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.61□□□□□ -1.83
USF2Q15853 AL133383.2-201ENST00000622958 2336 ntBASIC3.61□□□□□ -1.83
USF2Q15853 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC3.61□□□□□ -1.83
USF2Q15853 AC000367.1-201ENST00000452711 1766 ntBASIC3.61□□□□□ -1.83
USF2Q15853 MTND5P3-201ENST00000438536 1800 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms