Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.82□□□□□ -1.64
GABPAQ06546 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
GABPAQ06546 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
GABPAQ06546 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
GABPAQ06546 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
GABPAQ06546 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.82□□□□□ -1.64
GABPAQ06546 RN7SKP27-201ENST00000410684 333 ntBASIC4.82□□□□□ -1.64
GABPAQ06546 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.82□□□□□ -1.64
GABPAQ06546 OR6C64P-201ENST00000419708 825 ntBASIC4.82□□□□□ -1.64
GABPAQ06546 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.82□□□□□ -1.64
GABPAQ06546 PRELID3BP10-201ENST00000431957 584 ntBASIC4.82□□□□□ -1.64
GABPAQ06546 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.82□□□□□ -1.64
GABPAQ06546 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.82□□□□□ -1.64
GABPAQ06546 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.82□□□□□ -1.64
GABPAQ06546 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.82□□□□□ -1.64
GABPAQ06546 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.82□□□□□ -1.64
GABPAQ06546 RPL23AP89-201ENST00000439324 255 ntBASIC4.82□□□□□ -1.64
GABPAQ06546 Z99127.2-201ENST00000441426 334 ntBASIC4.82□□□□□ -1.64
GABPAQ06546 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.82□□□□□ -1.64
GABPAQ06546 RPL36AP13-201ENST00000457490 317 ntBASIC4.82□□□□□ -1.64
GABPAQ06546 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.82□□□□□ -1.64
GABPAQ06546 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
GABPAQ06546 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.82□□□□□ -1.64
GABPAQ06546 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC4.82□□□□□ -1.64
GABPAQ06546 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.82□□□□□ -1.64
GABPAQ06546 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.82□□□□□ -1.64
GABPAQ06546 AGGF1P6-201ENST00000569213 976 ntBASIC4.82□□□□□ -1.64
GABPAQ06546 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.82□□□□□ -1.64
GABPAQ06546 AC019131.2-201ENST00000609071 870 ntBASIC4.82□□□□□ -1.64
GABPAQ06546 MIR6868-201ENST00000611215 58 ntBASIC4.82□□□□□ -1.64
GABPAQ06546 AC104307.1-201ENST00000616142 196 ntBASIC4.82□□□□□ -1.64
GABPAQ06546 AL162233.1-201ENST00000620014 944 ntBASIC4.82□□□□□ -1.64
GABPAQ06546 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.82□□□□□ -1.64
GABPAQ06546 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
GABPAQ06546 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.82□□□□□ -1.64
GABPAQ06546 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
GABPAQ06546 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.82□□□□□ -1.64
GABPAQ06546 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
GABPAQ06546 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.82□□□□□ -1.64
GABPAQ06546 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.82□□□□□ -1.64
GABPAQ06546 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.82□□□□□ -1.64
GABPAQ06546 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
GABPAQ06546 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
GABPAQ06546 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
GABPAQ06546 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
GABPAQ06546 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
GABPAQ06546 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
GABPAQ06546 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
GABPAQ06546 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
GABPAQ06546 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
GABPAQ06546 AC104297.1-201ENST00000393779 870 ntBASIC4.81□□□□□ -1.64
GABPAQ06546 GSTA12P-201ENST00000402398 508 ntBASIC4.81□□□□□ -1.64
GABPAQ06546 RNU4-6P-201ENST00000410804 122 ntBASIC4.81□□□□□ -1.64
GABPAQ06546 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.81□□□□□ -1.64
GABPAQ06546 AC007563.3-201ENST00000433233 371 ntBASIC4.81□□□□□ -1.64
GABPAQ06546 HMGB3P10-201ENST00000434734 572 ntBASIC4.81□□□□□ -1.64
GABPAQ06546 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.81□□□□□ -1.64
GABPAQ06546 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
GABPAQ06546 RRM2P4-201ENST00000441721 562 ntBASIC4.81□□□□□ -1.64
GABPAQ06546 RPS4XP4-201ENST00000443195 763 ntBASIC4.81□□□□□ -1.64
GABPAQ06546 AC239367.2-201ENST00000447309 705 ntBASIC4.81□□□□□ -1.64
GABPAQ06546 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.81□□□□□ -1.64
GABPAQ06546 RAD23BP3-201ENST00000454157 1152 ntBASIC4.81□□□□□ -1.64
GABPAQ06546 AC025181.1-201ENST00000477507 416 ntBASIC4.81□□□□□ -1.64
GABPAQ06546 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.81□□□□□ -1.64
GABPAQ06546 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.81□□□□□ -1.64
GABPAQ06546 SAP18P1-201ENST00000512058 390 ntBASIC4.81□□□□□ -1.64
GABPAQ06546 RFPL4AP5-201ENST00000514977 504 ntBASIC4.81□□□□□ -1.64
GABPAQ06546 RNU7-143P-201ENST00000516781 65 ntBASIC4.81□□□□□ -1.64
GABPAQ06546 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC4.81□□□□□ -1.64
GABPAQ06546 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.81□□□□□ -1.64
GABPAQ06546 AC110743.1-201ENST00000584870 478 ntBASIC4.81□□□□□ -1.64
GABPAQ06546 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.81□□□□□ -1.64
GABPAQ06546 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.81□□□□□ -1.64
GABPAQ06546 AC015802.5-201ENST00000607478 399 ntBASIC4.81□□□□□ -1.64
GABPAQ06546 AC005021.1-201ENST00000608730 355 ntBASIC4.81□□□□□ -1.64
GABPAQ06546 AC092159.4-201ENST00000624944 550 ntBASIC4.81□□□□□ -1.64
GABPAQ06546 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.81□□□□□ -1.64
GABPAQ06546 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
GABPAQ06546 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
GABPAQ06546 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
GABPAQ06546 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
GABPAQ06546 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
GABPAQ06546 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
GABPAQ06546 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
GABPAQ06546 ASNSP1-204ENST00000641977 1664 ntBASIC4.8□□□□□ -1.64
GABPAQ06546 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.8□□□□□ -1.64
GABPAQ06546 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
GABPAQ06546 SNORA60-201ENST00000362396 134 ntBASIC4.8□□□□□ -1.64
GABPAQ06546 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.8□□□□□ -1.64
GABPAQ06546 RNU6-213P-201ENST00000384051 104 ntBASIC4.8□□□□□ -1.64
GABPAQ06546 RNU6-883P-201ENST00000384597 107 ntBASIC4.8□□□□□ -1.64
GABPAQ06546 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.8□□□□□ -1.64
GABPAQ06546 AL034403.1-201ENST00000399414 885 ntBASIC4.8□□□□□ -1.64
GABPAQ06546 CR848007.2-201ENST00000424918 787 ntBASIC4.8□□□□□ -1.64
GABPAQ06546 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.8□□□□□ -1.64
GABPAQ06546 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.8□□□□□ -1.64
GABPAQ06546 RNU6-889P-201ENST00000517189 103 ntBASIC4.8□□□□□ -1.64
GABPAQ06546 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.8□□□□□ -1.64
GABPAQ06546 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms