Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AC069366.1-201ENST00000583159 838 ntBASIC3.2□□□□□ -1.9
HIST1H1AQ02539 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.2□□□□□ -1.9
HIST1H1AQ02539 AC005255.1-201ENST00000593748 216 ntBASIC3.2□□□□□ -1.9
HIST1H1AQ02539 RPL12P25-202ENST00000598100 674 ntBASIC3.2□□□□□ -1.9
HIST1H1AQ02539 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.2□□□□□ -1.9
HIST1H1AQ02539 AC113403.1-201ENST00000604910 193 ntBASIC3.2□□□□□ -1.9
HIST1H1AQ02539 AC024940.4-201ENST00000605507 246 ntBASIC3.2□□□□□ -1.9
HIST1H1AQ02539 AL096803.3-201ENST00000609032 532 ntBASIC3.2□□□□□ -1.9
HIST1H1AQ02539 uc_338.13-201ENST00000618243 179 ntBASIC3.2□□□□□ -1.9
HIST1H1AQ02539 AC007546.1-201ENST00000619452 559 ntBASIC3.2□□□□□ -1.9
HIST1H1AQ02539 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HIST1H1AQ02539 AC140479.6-201ENST00000633535 357 ntBASIC3.2□□□□□ -1.9
HIST1H1AQ02539 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC3.2□□□□□ -1.9
HIST1H1AQ02539 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.2□□□□□ -1.9
HIST1H1AQ02539 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.2□□□□□ -1.9
HIST1H1AQ02539 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.2□□□□□ -1.9
HIST1H1AQ02539 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HIST1H1AQ02539 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HIST1H1AQ02539 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.2□□□□□ -1.9
HIST1H1AQ02539 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.19□□□□□ -1.9
HIST1H1AQ02539 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
HIST1H1AQ02539 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HIST1H1AQ02539 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HIST1H1AQ02539 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
HIST1H1AQ02539 RNA5SP105-201ENST00000391123 113 ntBASIC3.19□□□□□ -1.9
HIST1H1AQ02539 CCL7-202ENST00000394627 696 ntTSL 3 BASIC3.19□□□□□ -1.9
HIST1H1AQ02539 TANK-203ENST00000402568 878 ntTSL 5 BASIC3.19□□□□□ -1.9
HIST1H1AQ02539 SNORA3C-201ENST00000408792 125 ntBASIC3.19□□□□□ -1.9
HIST1H1AQ02539 AC098592.2-201ENST00000413158 265 ntBASIC3.19□□□□□ -1.9
HIST1H1AQ02539 AC009237.5-201ENST00000414271 501 ntBASIC3.19□□□□□ -1.9
HIST1H1AQ02539 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.19□□□□□ -1.9
HIST1H1AQ02539 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC3.19□□□□□ -1.9
HIST1H1AQ02539 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.19□□□□□ -1.9
HIST1H1AQ02539 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.19□□□□□ -1.9
HIST1H1AQ02539 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC3.19□□□□□ -1.9
HIST1H1AQ02539 RPS29P19-201ENST00000479709 171 ntBASIC3.19□□□□□ -1.9
HIST1H1AQ02539 AC104164.2-201ENST00000496953 495 ntBASIC3.19□□□□□ -1.9
HIST1H1AQ02539 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.19□□□□□ -1.9
HIST1H1AQ02539 AC093720.1-201ENST00000505681 714 ntBASIC3.19□□□□□ -1.9
HIST1H1AQ02539 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.19□□□□□ -1.9
HIST1H1AQ02539 RN7SKP92-201ENST00000517266 244 ntBASIC3.19□□□□□ -1.9
HIST1H1AQ02539 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.19□□□□□ -1.9
HIST1H1AQ02539 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.19□□□□□ -1.9
HIST1H1AQ02539 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.19□□□□□ -1.9
HIST1H1AQ02539 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC3.19□□□□□ -1.9
HIST1H1AQ02539 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.19□□□□□ -1.9
HIST1H1AQ02539 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.19□□□□□ -1.9
HIST1H1AQ02539 AL109766.1-201ENST00000555080 552 ntBASIC3.19□□□□□ -1.9
HIST1H1AQ02539 AC027176.2-201ENST00000559166 746 ntBASIC3.19□□□□□ -1.9
HIST1H1AQ02539 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
HIST1H1AQ02539 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC3.19□□□□□ -1.9
HIST1H1AQ02539 AC020915.5-201ENST00000596836 964 ntBASIC3.19□□□□□ -1.9
HIST1H1AQ02539 AC115286.1-201ENST00000604298 434 ntBASIC3.19□□□□□ -1.9
HIST1H1AQ02539 AL354984.3-201ENST00000604803 325 ntBASIC3.19□□□□□ -1.9
HIST1H1AQ02539 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.19□□□□□ -1.9
HIST1H1AQ02539 AP003392.5-201ENST00000607857 415 ntBASIC3.19□□□□□ -1.9
HIST1H1AQ02539 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.19□□□□□ -1.9
HIST1H1AQ02539 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HIST1H1AQ02539 AC020978.9-201ENST00000624380 1141 ntBASIC3.19□□□□□ -1.9
HIST1H1AQ02539 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.19□□□□□ -1.9
HIST1H1AQ02539 AC100871.1-201ENST00000507871 1456 ntBASIC3.19□□□□□ -1.9
HIST1H1AQ02539 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HIST1H1AQ02539 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.19□□□□□ -1.9
HIST1H1AQ02539 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HIST1H1AQ02539 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.19□□□□□ -1.9
HIST1H1AQ02539 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.19□□□□□ -1.9
HIST1H1AQ02539 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.19□□□□□ -1.9
HIST1H1AQ02539 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HIST1H1AQ02539 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
HIST1H1AQ02539 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
HIST1H1AQ02539 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
HIST1H1AQ02539 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HIST1H1AQ02539 OR11H4-201ENST00000315409 1082 ntBASIC3.18□□□□□ -1.9
HIST1H1AQ02539 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
HIST1H1AQ02539 RNU4-7P-201ENST00000364758 141 ntBASIC3.18□□□□□ -1.9
HIST1H1AQ02539 MIR129-1-201ENST00000384972 72 ntBASIC3.18□□□□□ -1.9
HIST1H1AQ02539 RNU6-328P-201ENST00000390887 106 ntBASIC3.18□□□□□ -1.9
HIST1H1AQ02539 RPS3AP23-201ENST00000401762 784 ntBASIC3.18□□□□□ -1.9
HIST1H1AQ02539 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.18□□□□□ -1.9
HIST1H1AQ02539 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.18□□□□□ -1.9
HIST1H1AQ02539 AL356387.2-201ENST00000422272 243 ntBASIC3.18□□□□□ -1.9
HIST1H1AQ02539 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.18□□□□□ -1.9
HIST1H1AQ02539 RPL23AP52-201ENST00000439311 478 ntBASIC3.18□□□□□ -1.9
HIST1H1AQ02539 TXNP2-201ENST00000443918 295 ntBASIC3.18□□□□□ -1.9
HIST1H1AQ02539 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.18□□□□□ -1.9
HIST1H1AQ02539 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC3.18□□□□□ -1.9
HIST1H1AQ02539 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.18□□□□□ -1.9
HIST1H1AQ02539 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.18□□□□□ -1.9
HIST1H1AQ02539 TRAV31-201ENST00000502780 342 ntBASIC3.18□□□□□ -1.9
HIST1H1AQ02539 BNIP3P41-201ENST00000503774 571 ntBASIC3.18□□□□□ -1.9
HIST1H1AQ02539 AK3P4-201ENST00000504283 583 ntBASIC3.18□□□□□ -1.9
HIST1H1AQ02539 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC3.18□□□□□ -1.9
HIST1H1AQ02539 AC005798.1-201ENST00000513715 387 ntBASIC3.18□□□□□ -1.9
HIST1H1AQ02539 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.18□□□□□ -1.9
HIST1H1AQ02539 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HIST1H1AQ02539 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HIST1H1AQ02539 AC063950.1-201ENST00000552036 308 ntBASIC3.18□□□□□ -1.9
HIST1H1AQ02539 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.18□□□□□ -1.9
HIST1H1AQ02539 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC3.18□□□□□ -1.9
HIST1H1AQ02539 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms