Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
LMO4P61968 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
LMO4P61968 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.85□□□□□ -1.79
LMO4P61968 RNU6-207P-201ENST00000384137 107 ntBASIC3.85□□□□□ -1.79
LMO4P61968 RNU6-185P-201ENST00000384421 107 ntBASIC3.85□□□□□ -1.79
LMO4P61968 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
LMO4P61968 TAF9BP2-201ENST00000400856 499 ntBASIC3.85□□□□□ -1.79
LMO4P61968 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
LMO4P61968 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC3.85□□□□□ -1.79
LMO4P61968 RN7SKP97-201ENST00000410966 333 ntBASIC3.85□□□□□ -1.79
LMO4P61968 TRGV6-201ENST00000417928 299 ntBASIC3.85□□□□□ -1.79
LMO4P61968 AC009518.2-201ENST00000418056 731 ntBASIC3.85□□□□□ -1.79
LMO4P61968 AL592293.2-201ENST00000422292 996 ntBASIC3.85□□□□□ -1.79
LMO4P61968 AC104333.2-201ENST00000422630 192 ntBASIC3.85□□□□□ -1.79
LMO4P61968 CHIAP3-201ENST00000423668 1133 ntBASIC3.85□□□□□ -1.79
LMO4P61968 RPL12P34-201ENST00000424532 479 ntBASIC3.85□□□□□ -1.79
LMO4P61968 OSTCP5-201ENST00000425293 453 ntBASIC3.85□□□□□ -1.79
LMO4P61968 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC3.85□□□□□ -1.79
LMO4P61968 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC3.85□□□□□ -1.79
LMO4P61968 USP9YP28-201ENST00000435142 589 ntBASIC3.85□□□□□ -1.79
LMO4P61968 AC073143.1-201ENST00000436316 395 ntBASIC3.85□□□□□ -1.79
LMO4P61968 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.85□□□□□ -1.79
LMO4P61968 CR769776.1-201ENST00000441254 787 ntBASIC3.85□□□□□ -1.79
LMO4P61968 RPL23AP23-201ENST00000452590 471 ntBASIC3.85□□□□□ -1.79
LMO4P61968 SCARNA10-201ENST00000459255 330 ntBASIC3.85□□□□□ -1.79
LMO4P61968 NAP1L1P3-201ENST00000462291 880 ntBASIC3.85□□□□□ -1.79
LMO4P61968 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.85□□□□□ -1.79
LMO4P61968 RPS17P11-201ENST00000474297 293 ntBASIC3.85□□□□□ -1.79
LMO4P61968 RPL21P6-201ENST00000479171 504 ntBASIC3.85□□□□□ -1.79
LMO4P61968 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.85□□□□□ -1.79
LMO4P61968 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.85□□□□□ -1.79
LMO4P61968 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.85□□□□□ -1.79
LMO4P61968 AC091435.1-201ENST00000505442 584 ntBASIC3.85□□□□□ -1.79
LMO4P61968 AC025674.1-201ENST00000507074 324 ntBASIC3.85□□□□□ -1.79
LMO4P61968 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC3.85□□□□□ -1.79
LMO4P61968 RN7SKP141-201ENST00000516167 338 ntBASIC3.85□□□□□ -1.79
LMO4P61968 MRPS36P3-201ENST00000519284 130 ntBASIC3.85□□□□□ -1.79
LMO4P61968 IGKV2D-10-201ENST00000520194 281 ntBASIC3.85□□□□□ -1.79
LMO4P61968 AC136624.4-201ENST00000573044 370 ntBASIC3.85□□□□□ -1.79
LMO4P61968 PIGPP4-201ENST00000584447 307 ntBASIC3.85□□□□□ -1.79
LMO4P61968 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.85□□□□□ -1.79
LMO4P61968 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.85□□□□□ -1.79
LMO4P61968 AC068790.2-201ENST00000602601 557 ntBASIC3.85□□□□□ -1.79
LMO4P61968 AC079880.2-201ENST00000603790 1213 ntBASIC3.85□□□□□ -1.79
LMO4P61968 AL139344.1-201ENST00000605228 195 ntBASIC3.85□□□□□ -1.79
LMO4P61968 AC090525.3-201ENST00000605601 189 ntBASIC3.85□□□□□ -1.79
LMO4P61968 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
LMO4P61968 AL133243.1-201ENST00000614487 366 ntBASIC3.85□□□□□ -1.79
LMO4P61968 AP004607.9-201ENST00000618202 316 ntBASIC3.85□□□□□ -1.79
LMO4P61968 AL035461.2-201ENST00000619201 524 ntBASIC3.85□□□□□ -1.79
LMO4P61968 AP005019.3-201ENST00000620418 560 ntBASIC3.85□□□□□ -1.79
LMO4P61968 AC007342.8-201ENST00000623278 678 ntBASIC3.85□□□□□ -1.79
LMO4P61968 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
LMO4P61968 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
LMO4P61968 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
LMO4P61968 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
LMO4P61968 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
LMO4P61968 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC3.85□□□□□ -1.79
LMO4P61968 ZNF90P1-201ENST00000480493 1951 ntBASIC3.85□□□□□ -1.79
LMO4P61968 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
LMO4P61968 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
LMO4P61968 AL136164.3-201ENST00000624429 3978 ntBASIC3.85□□□□□ -1.79
LMO4P61968 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
LMO4P61968 AL034370.1-201ENST00000397254 1590 ntBASIC3.85□□□□□ -1.79
LMO4P61968 AC092376.2-201ENST00000622621 4116 ntBASIC3.85□□□□□ -1.79
LMO4P61968 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
LMO4P61968 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC3.84□□□□□ -1.79
LMO4P61968 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
LMO4P61968 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
LMO4P61968 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
LMO4P61968 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
LMO4P61968 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
LMO4P61968 AL031119.1-201ENST00000404707 1879 ntBASIC3.84□□□□□ -1.79
LMO4P61968 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC3.84□□□□□ -1.79
LMO4P61968 AC010329.2-201ENST00000595195 2737 ntBASIC3.84□□□□□ -1.79
LMO4P61968 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
LMO4P61968 CARF-203ENST00000414439 2099 ntTSL 2 BASIC3.84□□□□□ -1.79
LMO4P61968 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
LMO4P61968 FAM3C2-201ENST00000312214 681 ntBASIC3.84□□□□□ -1.79
LMO4P61968 AC017079.1-201ENST00000333650 415 ntBASIC3.84□□□□□ -1.79
LMO4P61968 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
LMO4P61968 SNORA70.2-201ENST00000364506 135 ntBASIC3.84□□□□□ -1.79
LMO4P61968 Y_RNA.318-201ENST00000365131 97 ntBASIC3.84□□□□□ -1.79
LMO4P61968 RNU6-481P-201ENST00000384194 107 ntBASIC3.84□□□□□ -1.79
LMO4P61968 RNU6-452P-201ENST00000384406 107 ntBASIC3.84□□□□□ -1.79
LMO4P61968 AC119751.3-201ENST00000399720 670 ntBASIC3.84□□□□□ -1.79
LMO4P61968 SKINT1L-201ENST00000401057 817 ntBASIC3.84□□□□□ -1.79
LMO4P61968 AP000580.1-201ENST00000404439 358 ntBASIC3.84□□□□□ -1.79
LMO4P61968 AL078595.1-201ENST00000404458 226 ntBASIC3.84□□□□□ -1.79
LMO4P61968 U3.35-201ENST00000408405 208 ntBASIC3.84□□□□□ -1.79
LMO4P61968 RPL6P29-201ENST00000414863 865 ntBASIC3.84□□□□□ -1.79
LMO4P61968 LIPT1P1-201ENST00000415870 1186 ntBASIC3.84□□□□□ -1.79
LMO4P61968 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
LMO4P61968 E2F6P2-201ENST00000420708 748 ntBASIC3.84□□□□□ -1.79
LMO4P61968 RPL7P57-201ENST00000423238 740 ntBASIC3.84□□□□□ -1.79
LMO4P61968 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.84□□□□□ -1.79
LMO4P61968 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC3.84□□□□□ -1.79
LMO4P61968 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC3.84□□□□□ -1.79
LMO4P61968 GSTA7P-201ENST00000438425 448 ntBASIC3.84□□□□□ -1.79
LMO4P61968 AC004938.1-201ENST00000438468 308 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms