Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5□□□□□ -1.61
CLRN1P58418 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5□□□□□ -1.61
CLRN1P58418 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5□□□□□ -1.61
CLRN1P58418 NRON-201ENST00000517270 370 ntBASIC5□□□□□ -1.61
CLRN1P58418 TBCA-203ENST00000517679 545 ntTSL 3 BASIC5□□□□□ -1.61
CLRN1P58418 AC025881.1-201ENST00000518851 512 ntBASIC5□□□□□ -1.61
CLRN1P58418 RGS5-218ENST00000526176 574 ntTSL 4 BASIC5□□□□□ -1.61
CLRN1P58418 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5□□□□□ -1.61
CLRN1P58418 AC005363.1-201ENST00000530779 351 ntBASIC5□□□□□ -1.61
CLRN1P58418 AC122688.1-201ENST00000541494 223 ntBASIC5□□□□□ -1.61
CLRN1P58418 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC5□□□□□ -1.61
CLRN1P58418 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC5□□□□□ -1.61
CLRN1P58418 IGBP1P1-201ENST00000554337 1009 ntBASIC5□□□□□ -1.61
CLRN1P58418 ZNF519P3-201ENST00000557158 1032 ntBASIC5□□□□□ -1.61
CLRN1P58418 AC009063.1-201ENST00000563342 702 ntBASIC5□□□□□ -1.61
CLRN1P58418 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5□□□□□ -1.61
CLRN1P58418 AC136618.2-201ENST00000575091 400 ntBASIC5□□□□□ -1.61
CLRN1P58418 H3F3BP2-201ENST00000583907 357 ntBASIC5□□□□□ -1.61
CLRN1P58418 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC5□□□□□ -1.61
CLRN1P58418 AC115085.1-201ENST00000588924 229 ntBASIC5□□□□□ -1.61
CLRN1P58418 AC083760.1-201ENST00000589621 670 ntBASIC5□□□□□ -1.61
CLRN1P58418 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC5□□□□□ -1.61
CLRN1P58418 AC006566.1-201ENST00000608943 513 ntBASIC5□□□□□ -1.61
CLRN1P58418 AC007684.1-201ENST00000609671 477 ntBASIC5□□□□□ -1.61
CLRN1P58418 AC116651.1-201ENST00000609724 556 ntBASIC5□□□□□ -1.61
CLRN1P58418 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5□□□□□ -1.61
CLRN1P58418 AP000648.2-201ENST00000624182 404 ntBASIC5□□□□□ -1.61
CLRN1P58418 SEPT14P19-203ENST00000633205 211 ntBASIC5□□□□□ -1.61
CLRN1P58418 OR52B5P-202ENST00000641118 1110 ntBASIC5□□□□□ -1.61
CLRN1P58418 AL590763.1-201ENST00000398297 1545 ntBASIC5□□□□□ -1.61
CLRN1P58418 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
CLRN1P58418 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5□□□□□ -1.61
CLRN1P58418 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
CLRN1P58418 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5□□□□□ -1.61
CLRN1P58418 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5□□□□□ -1.61
CLRN1P58418 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
CLRN1P58418 ZNF37BP-203ENST00000452306 1352 ntBASIC5□□□□□ -1.61
CLRN1P58418 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5□□□□□ -1.61
CLRN1P58418 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5□□□□□ -1.61
CLRN1P58418 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5□□□□□ -1.61
CLRN1P58418 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
CLRN1P58418 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5□□□□□ -1.61
CLRN1P58418 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5□□□□□ -1.61
CLRN1P58418 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CLRN1P58418 AC112198.2-201ENST00000426589 6996 ntBASIC5□□□□□ -1.61
CLRN1P58418 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLRN1P58418 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CLRN1P58418 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CLRN1P58418 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CLRN1P58418 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLRN1P58418 AC068870.1-201ENST00000563737 2455 ntBASIC4.99□□□□□ -1.61
CLRN1P58418 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLRN1P58418 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC4.99□□□□□ -1.61
CLRN1P58418 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
CLRN1P58418 RNA5SP453-201ENST00000362503 119 ntBASIC4.99□□□□□ -1.61
CLRN1P58418 RN7SKP185-201ENST00000362813 326 ntBASIC4.99□□□□□ -1.61
CLRN1P58418 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC4.99□□□□□ -1.61
CLRN1P58418 MIR621-201ENST00000384919 96 ntBASIC4.99□□□□□ -1.61
CLRN1P58418 HMGB1P20-201ENST00000402555 677 ntBASIC4.99□□□□□ -1.61
CLRN1P58418 AL009179.1-201ENST00000406085 265 ntBASIC4.99□□□□□ -1.61
CLRN1P58418 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLRN1P58418 RPL17P12-201ENST00000413391 526 ntBASIC4.99□□□□□ -1.61
CLRN1P58418 OR2AT2P-201ENST00000413438 905 ntBASIC4.99□□□□□ -1.61
CLRN1P58418 RBMY2KP-201ENST00000418221 992 ntBASIC4.99□□□□□ -1.61
CLRN1P58418 RPL21P32-201ENST00000419877 477 ntBASIC4.99□□□□□ -1.61
CLRN1P58418 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CLRN1P58418 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC4.99□□□□□ -1.61
CLRN1P58418 AC009237.2-201ENST00000421358 284 ntBASIC4.99□□□□□ -1.61
CLRN1P58418 AL389915.1-201ENST00000422463 466 ntBASIC4.99□□□□□ -1.61
CLRN1P58418 NIPA2P1-201ENST00000426223 976 ntBASIC4.99□□□□□ -1.61
CLRN1P58418 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLRN1P58418 AC099670.2-201ENST00000435130 321 ntBASIC4.99□□□□□ -1.61
CLRN1P58418 FMO7P-201ENST00000436045 768 ntBASIC4.99□□□□□ -1.61
CLRN1P58418 LINC02210-201ENST00000444561 288 ntBASIC4.99□□□□□ -1.61
CLRN1P58418 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC4.99□□□□□ -1.61
CLRN1P58418 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC4.99□□□□□ -1.61
CLRN1P58418 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CLRN1P58418 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC4.99□□□□□ -1.61
CLRN1P58418 AL445665.1-202ENST00000452436 324 ntBASIC4.99□□□□□ -1.61
CLRN1P58418 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CLRN1P58418 RPL37P3-201ENST00000456825 293 ntBASIC4.99□□□□□ -1.61
CLRN1P58418 RPS23P6-201ENST00000466136 431 ntBASIC4.99□□□□□ -1.61
CLRN1P58418 RN7SL197P-201ENST00000466981 299 ntBASIC4.99□□□□□ -1.61
CLRN1P58418 AC094085.1-201ENST00000468914 584 ntBASIC4.99□□□□□ -1.61
CLRN1P58418 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.99□□□□□ -1.61
CLRN1P58418 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CLRN1P58418 RPL7P6-201ENST00000480903 738 ntBASIC4.99□□□□□ -1.61
CLRN1P58418 OR4G11P-201ENST00000492842 939 ntBASIC4.99□□□□□ -1.61
CLRN1P58418 RPS17P5-201ENST00000498293 408 ntBASIC4.99□□□□□ -1.61
CLRN1P58418 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC4.99□□□□□ -1.61
CLRN1P58418 RNU6-583P-201ENST00000516012 92 ntBASIC4.99□□□□□ -1.61
CLRN1P58418 RNU6-615P-201ENST00000516065 106 ntBASIC4.99□□□□□ -1.61
CLRN1P58418 RNU6-1178P-201ENST00000516674 107 ntBASIC4.99□□□□□ -1.61
CLRN1P58418 IGLV3-24-201ENST00000517477 197 ntBASIC4.99□□□□□ -1.61
CLRN1P58418 MINCR-206ENST00000524335 499 ntTSL 2 BASIC4.99□□□□□ -1.61
CLRN1P58418 DEFB131D-201ENST00000526803 184 ntBASIC4.99□□□□□ -1.61
CLRN1P58418 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC4.99□□□□□ -1.61
CLRN1P58418 OR4A45P-201ENST00000529954 901 ntBASIC4.99□□□□□ -1.61
CLRN1P58418 DCN-210ENST00000547568 823 ntTSL 3 BASIC4.99□□□□□ -1.61
CLRN1P58418 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 137.3 ms