Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AC104978.1-201ENST00000449387 391 ntBASIC4.55□□□□□ -1.68
CDH12P55289 FAR2P1-206ENST00000449736 709 ntBASIC4.55□□□□□ -1.68
CDH12P55289 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
CDH12P55289 AC079776.3-201ENST00000450665 370 ntBASIC4.55□□□□□ -1.68
CDH12P55289 AL133217.1-201ENST00000450980 425 ntBASIC4.55□□□□□ -1.68
CDH12P55289 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.55□□□□□ -1.68
CDH12P55289 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.55□□□□□ -1.68
CDH12P55289 AL389915.2-201ENST00000454576 441 ntBASIC4.55□□□□□ -1.68
CDH12P55289 BX248409.1-201ENST00000455497 255 ntBASIC4.55□□□□□ -1.68
CDH12P55289 AL445433.1-201ENST00000457507 257 ntBASIC4.55□□□□□ -1.68
CDH12P55289 AC097484.1-201ENST00000471148 389 ntBASIC4.55□□□□□ -1.68
CDH12P55289 RN7SL591P-201ENST00000496150 292 ntBASIC4.55□□□□□ -1.68
CDH12P55289 AC082651.2-201ENST00000496833 166 ntBASIC4.55□□□□□ -1.68
CDH12P55289 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.55□□□□□ -1.68
CDH12P55289 AC118282.2-201ENST00000508739 374 ntBASIC4.55□□□□□ -1.68
CDH12P55289 ATP5LP3-201ENST00000514223 304 ntBASIC4.55□□□□□ -1.68
CDH12P55289 AL671862.1-201ENST00000515851 349 ntBASIC4.55□□□□□ -1.68
CDH12P55289 RN7SKP260-201ENST00000516907 149 ntBASIC4.55□□□□□ -1.68
CDH12P55289 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.55□□□□□ -1.68
CDH12P55289 C1GALT1P3-201ENST00000522049 819 ntBASIC4.55□□□□□ -1.68
CDH12P55289 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.55□□□□□ -1.68
CDH12P55289 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.55□□□□□ -1.68
CDH12P55289 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.55□□□□□ -1.68
CDH12P55289 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.55□□□□□ -1.68
CDH12P55289 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.55□□□□□ -1.68
CDH12P55289 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC4.55□□□□□ -1.68
CDH12P55289 NBEAP1-201ENST00000554452 979 ntBASIC4.55□□□□□ -1.68
CDH12P55289 OR11J2P-201ENST00000555298 907 ntBASIC4.55□□□□□ -1.68
CDH12P55289 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC4.55□□□□□ -1.68
CDH12P55289 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.55□□□□□ -1.68
CDH12P55289 AC087477.6-201ENST00000559595 843 ntBASIC4.55□□□□□ -1.68
CDH12P55289 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.55□□□□□ -1.68
CDH12P55289 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.55□□□□□ -1.68
CDH12P55289 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.55□□□□□ -1.68
CDH12P55289 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC4.55□□□□□ -1.68
CDH12P55289 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.55□□□□□ -1.68
CDH12P55289 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.55□□□□□ -1.68
CDH12P55289 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.55□□□□□ -1.68
CDH12P55289 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.55□□□□□ -1.68
CDH12P55289 AL109653.1-201ENST00000603091 248 ntBASIC4.55□□□□□ -1.68
CDH12P55289 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.55□□□□□ -1.68
CDH12P55289 AC074140.1-201ENST00000621617 208 ntBASIC4.55□□□□□ -1.68
CDH12P55289 AC012414.7-202ENST00000622705 1090 ntBASIC4.55□□□□□ -1.68
CDH12P55289 AL157770.1-201ENST00000623049 439 ntBASIC4.55□□□□□ -1.68
CDH12P55289 AC007490.1-201ENST00000624321 703 ntBASIC4.55□□□□□ -1.68
CDH12P55289 AL512506.2-201ENST00000624472 458 ntBASIC4.55□□□□□ -1.68
CDH12P55289 MIR3974-201ENST00000637126 96 ntBASIC4.55□□□□□ -1.68
CDH12P55289 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CDH12P55289 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CDH12P55289 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.55□□□□□ -1.68
CDH12P55289 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CDH12P55289 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CDH12P55289 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.55□□□□□ -1.68
CDH12P55289 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDH12P55289 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CDH12P55289 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDH12P55289 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.55□□□□□ -1.68
CDH12P55289 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
CDH12P55289 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
CDH12P55289 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDH12P55289 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CDH12P55289 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDH12P55289 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDH12P55289 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CDH12P55289 ECM1P2-201ENST00000503354 1577 ntBASIC4.54□□□□□ -1.68
CDH12P55289 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CDH12P55289 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CDH12P55289 SCN1A-220ENST00000641603 12506 ntBASIC4.54□□□□□ -1.68
CDH12P55289 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDH12P55289 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
CDH12P55289 RNU6-317P-201ENST00000384031 107 ntBASIC4.54□□□□□ -1.68
CDH12P55289 Y_RNA.465-201ENST00000384293 102 ntBASIC4.54□□□□□ -1.68
CDH12P55289 RSL24D1P4-201ENST00000400938 484 ntBASIC4.54□□□□□ -1.68
CDH12P55289 AL391361.1-201ENST00000405580 489 ntBASIC4.54□□□□□ -1.68
CDH12P55289 AL356131.1-201ENST00000405826 414 ntBASIC4.54□□□□□ -1.68
CDH12P55289 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.54□□□□□ -1.68
CDH12P55289 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.54□□□□□ -1.68
CDH12P55289 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.54□□□□□ -1.68
CDH12P55289 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.54□□□□□ -1.68
CDH12P55289 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.54□□□□□ -1.68
CDH12P55289 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.54□□□□□ -1.68
CDH12P55289 PTP4A1P5-201ENST00000420305 455 ntBASIC4.54□□□□□ -1.68
CDH12P55289 E2F6P2-201ENST00000420708 748 ntBASIC4.54□□□□□ -1.68
CDH12P55289 RPL7P53-201ENST00000421245 739 ntBASIC4.54□□□□□ -1.68
CDH12P55289 NPM1P22-201ENST00000427761 952 ntBASIC4.54□□□□□ -1.68
CDH12P55289 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.54□□□□□ -1.68
CDH12P55289 MTCO1P3-201ENST00000429327 192 ntBASIC4.54□□□□□ -1.68
CDH12P55289 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.54□□□□□ -1.68
CDH12P55289 MTND1P32-201ENST00000433043 938 ntBASIC4.54□□□□□ -1.68
CDH12P55289 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.54□□□□□ -1.68
CDH12P55289 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC4.54□□□□□ -1.68
CDH12P55289 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.54□□□□□ -1.68
CDH12P55289 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.54□□□□□ -1.68
CDH12P55289 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC4.54□□□□□ -1.68
CDH12P55289 AC092809.1-201ENST00000441469 474 ntBASIC4.54□□□□□ -1.68
CDH12P55289 RPL23AP76-201ENST00000441860 458 ntBASIC4.54□□□□□ -1.68
CDH12P55289 MRPL48P1-201ENST00000445390 636 ntBASIC4.54□□□□□ -1.68
CDH12P55289 TPTE2P6-202ENST00000445572 1007 ntBASIC4.54□□□□□ -1.68
CDH12P55289 HMGB1P16-201ENST00000447155 540 ntBASIC4.54□□□□□ -1.68
CDH12P55289 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms