Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.47□□□□□ -1.69
CASP4P49662 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.47□□□□□ -1.69
CASP4P49662 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.47□□□□□ -1.69
CASP4P49662 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CASP4P49662 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.47□□□□□ -1.69
CASP4P49662 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
CASP4P49662 AC007390.2-201ENST00000606229 3803 ntBASIC4.47□□□□□ -1.69
CASP4P49662 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CASP4P49662 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.47□□□□□ -1.69
CASP4P49662 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
CASP4P49662 HSPD1P11-201ENST00000508643 1702 ntBASIC4.46□□□□□ -1.69
CASP4P49662 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.69
CASP4P49662 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
CASP4P49662 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CASP4P49662 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CASP4P49662 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.46□□□□□ -1.7
CASP4P49662 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CASP4P49662 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CASP4P49662 RNA5SP513-201ENST00000364648 118 ntBASIC4.46□□□□□ -1.7
CASP4P49662 SNORA62-201ENST00000365493 153 ntBASIC4.46□□□□□ -1.7
CASP4P49662 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CASP4P49662 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CASP4P49662 AMZ2P2-201ENST00000406819 1057 ntBASIC4.46□□□□□ -1.7
CASP4P49662 OR8G2P-201ENST00000412796 908 ntBASIC4.46□□□□□ -1.7
CASP4P49662 COX6CP17-201ENST00000421389 185 ntBASIC4.46□□□□□ -1.7
CASP4P49662 MTCO1P54-201ENST00000430139 712 ntBASIC4.46□□□□□ -1.7
CASP4P49662 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.46□□□□□ -1.7
CASP4P49662 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.46□□□□□ -1.7
CASP4P49662 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.46□□□□□ -1.7
CASP4P49662 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.46□□□□□ -1.7
CASP4P49662 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.46□□□□□ -1.7
CASP4P49662 IGKV2-38-201ENST00000517443 247 ntBASIC4.46□□□□□ -1.7
CASP4P49662 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.46□□□□□ -1.7
CASP4P49662 MIR5684-201ENST00000585074 65 ntBASIC4.46□□□□□ -1.7
CASP4P49662 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC4.46□□□□□ -1.7
CASP4P49662 MIR6716-201ENST00000613413 80 ntBASIC4.46□□□□□ -1.7
CASP4P49662 AC145207.9-201ENST00000623802 325 ntBASIC4.46□□□□□ -1.7
CASP4P49662 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC4.46□□□□□ -1.7
CASP4P49662 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.46□□□□□ -1.7
CASP4P49662 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CASP4P49662 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CASP4P49662 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.46□□□□□ -1.7
CASP4P49662 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.46□□□□□ -1.7
CASP4P49662 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CASP4P49662 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.46□□□□□ -1.7
CASP4P49662 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
CASP4P49662 AC074029.4-201ENST00000624796 1859 ntBASIC4.45□□□□□ -1.7
CASP4P49662 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
CASP4P49662 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.45□□□□□ -1.7
CASP4P49662 RNA5SP130-201ENST00000364431 114 ntBASIC4.45□□□□□ -1.7
CASP4P49662 RHOT1P2-201ENST00000366423 333 ntBASIC4.45□□□□□ -1.7
CASP4P49662 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.45□□□□□ -1.7
CASP4P49662 MIR93-201ENST00000385024 80 ntBASIC4.45□□□□□ -1.7
CASP4P49662 AL049693.1-201ENST00000402760 611 ntBASIC4.45□□□□□ -1.7
CASP4P49662 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.45□□□□□ -1.7
CASP4P49662 AL353597.2-202ENST00000434901 373 ntBASIC4.45□□□□□ -1.7
CASP4P49662 RPS4XP4-201ENST00000443195 763 ntBASIC4.45□□□□□ -1.7
CASP4P49662 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.45□□□□□ -1.7
CASP4P49662 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.45□□□□□ -1.7
CASP4P49662 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.45□□□□□ -1.7
CASP4P49662 RN7SL604P-201ENST00000492589 296 ntBASIC4.45□□□□□ -1.7
CASP4P49662 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.45□□□□□ -1.7
CASP4P49662 RNA5SP154-201ENST00000516193 111 ntBASIC4.45□□□□□ -1.7
CASP4P49662 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.45□□□□□ -1.7
CASP4P49662 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.45□□□□□ -1.7
CASP4P49662 UBTFL9-201ENST00000534504 1148 ntBASIC4.45□□□□□ -1.7
CASP4P49662 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.45□□□□□ -1.7
CASP4P49662 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.45□□□□□ -1.7
CASP4P49662 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.45□□□□□ -1.7
CASP4P49662 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.45□□□□□ -1.7
CASP4P49662 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.45□□□□□ -1.7
CASP4P49662 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.45□□□□□ -1.7
CASP4P49662 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.45□□□□□ -1.7
CASP4P49662 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.45□□□□□ -1.7
CASP4P49662 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.45□□□□□ -1.7
CASP4P49662 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.45□□□□□ -1.7
CASP4P49662 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.45□□□□□ -1.7
CASP4P49662 AC019080.5-201ENST00000624891 757 ntBASIC4.45□□□□□ -1.7
CASP4P49662 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.45□□□□□ -1.7
CASP4P49662 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.45□□□□□ -1.7
CASP4P49662 AL451142.2-201ENST00000429076 2090 ntBASIC4.45□□□□□ -1.7
CASP4P49662 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CASP4P49662 MTCO1P8-201ENST00000416914 1523 ntBASIC4.45□□□□□ -1.7
CASP4P49662 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CASP4P49662 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CASP4P49662 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.45□□□□□ -1.7
CASP4P49662 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
CASP4P49662 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
CASP4P49662 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CASP4P49662 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.44□□□□□ -1.7
CASP4P49662 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CASP4P49662 OR11H4-201ENST00000315409 1082 ntBASIC4.44□□□□□ -1.7
CASP4P49662 SNORD35B-201ENST00000363660 87 ntBASIC4.44□□□□□ -1.7
CASP4P49662 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CASP4P49662 RNU6-225P-201ENST00000384613 103 ntBASIC4.44□□□□□ -1.7
CASP4P49662 HSPD1P16-201ENST00000402302 394 ntBASIC4.44□□□□□ -1.7
CASP4P49662 RNA5SP306-201ENST00000411087 107 ntBASIC4.44□□□□□ -1.7
CASP4P49662 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.44□□□□□ -1.7
CASP4P49662 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.44□□□□□ -1.7
CASP4P49662 OR2X1P-201ENST00000421144 687 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms