Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.34□□□□□ -1.71
TNFSF9P41273 AP002967.1-201ENST00000624203 539 ntBASIC4.34□□□□□ -1.71
TNFSF9P41273 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.34□□□□□ -1.71
TNFSF9P41273 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.34□□□□□ -1.71
TNFSF9P41273 OR10AB1P-202ENST00000641219 1686 ntBASIC4.34□□□□□ -1.71
TNFSF9P41273 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
TNFSF9P41273 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
TNFSF9P41273 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
TNFSF9P41273 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.34□□□□□ -1.72
TNFSF9P41273 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
TNFSF9P41273 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.72
TNFSF9P41273 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
TNFSF9P41273 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.33□□□□□ -1.72
TNFSF9P41273 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TNFSF9P41273 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.33□□□□□ -1.72
TNFSF9P41273 RNA5SP52-201ENST00000362448 134 ntBASIC4.33□□□□□ -1.72
TNFSF9P41273 RN7SKP224-201ENST00000364140 325 ntBASIC4.33□□□□□ -1.72
TNFSF9P41273 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.33□□□□□ -1.72
TNFSF9P41273 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.33□□□□□ -1.72
TNFSF9P41273 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TNFSF9P41273 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.33□□□□□ -1.72
TNFSF9P41273 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.33□□□□□ -1.72
TNFSF9P41273 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.33□□□□□ -1.72
TNFSF9P41273 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.33□□□□□ -1.72
TNFSF9P41273 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TNFSF9P41273 RPS29P7-201ENST00000439662 171 ntBASIC4.33□□□□□ -1.72
TNFSF9P41273 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.33□□□□□ -1.72
TNFSF9P41273 RAB28P3-201ENST00000448325 597 ntBASIC4.33□□□□□ -1.72
TNFSF9P41273 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.33□□□□□ -1.72
TNFSF9P41273 FABP3P2-201ENST00000453169 399 ntBASIC4.33□□□□□ -1.72
TNFSF9P41273 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.33□□□□□ -1.72
TNFSF9P41273 AC091153.1-201ENST00000466297 402 ntBASIC4.33□□□□□ -1.72
TNFSF9P41273 SEPT7P6-201ENST00000469999 1143 ntBASIC4.33□□□□□ -1.72
TNFSF9P41273 RPL21P129-201ENST00000491732 478 ntBASIC4.33□□□□□ -1.72
TNFSF9P41273 AC010460.1-201ENST00000507087 466 ntBASIC4.33□□□□□ -1.72
TNFSF9P41273 AC020593.1-201ENST00000507399 299 ntBASIC4.33□□□□□ -1.72
TNFSF9P41273 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.33□□□□□ -1.72
TNFSF9P41273 IGKV2-38-201ENST00000517443 247 ntBASIC4.33□□□□□ -1.72
TNFSF9P41273 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC4.33□□□□□ -1.72
TNFSF9P41273 YPEL5P3-201ENST00000547227 352 ntBASIC4.33□□□□□ -1.72
TNFSF9P41273 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.33□□□□□ -1.72
TNFSF9P41273 AC053481.4-201ENST00000583164 216 ntBASIC4.33□□□□□ -1.72
TNFSF9P41273 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.33□□□□□ -1.72
TNFSF9P41273 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.33□□□□□ -1.72
TNFSF9P41273 AL606490.9-201ENST00000603331 271 ntBASIC4.33□□□□□ -1.72
TNFSF9P41273 AL773545.4-201ENST00000637262 310 ntBASIC4.33□□□□□ -1.72
TNFSF9P41273 AL513478.4-201ENST00000641636 310 ntBASIC4.33□□□□□ -1.72
TNFSF9P41273 AC011266.1-201ENST00000624119 3569 ntBASIC4.33□□□□□ -1.72
TNFSF9P41273 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TNFSF9P41273 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
TNFSF9P41273 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.33□□□□□ -1.72
TNFSF9P41273 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
TNFSF9P41273 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TNFSF9P41273 OR51C1P-202ENST00000641159 1444 ntBASIC4.32□□□□□ -1.72
TNFSF9P41273 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.32□□□□□ -1.72
TNFSF9P41273 MIR365B-201ENST00000362317 111 ntBASIC4.32□□□□□ -1.72
TNFSF9P41273 OR13Z1P-201ENST00000416141 834 ntBASIC4.32□□□□□ -1.72
TNFSF9P41273 AL590609.2-201ENST00000421430 368 ntBASIC4.32□□□□□ -1.72
TNFSF9P41273 AL121578.1-201ENST00000428051 892 ntBASIC4.32□□□□□ -1.72
TNFSF9P41273 MTCO1P54-201ENST00000430139 712 ntBASIC4.32□□□□□ -1.72
TNFSF9P41273 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC4.32□□□□□ -1.72
TNFSF9P41273 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.32□□□□□ -1.72
TNFSF9P41273 AL035551.1-201ENST00000446931 348 ntBASIC4.32□□□□□ -1.72
TNFSF9P41273 AC243772.1-201ENST00000451620 410 ntBASIC4.32□□□□□ -1.72
TNFSF9P41273 AC069277.2-201ENST00000454211 432 ntBASIC4.32□□□□□ -1.72
TNFSF9P41273 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.32□□□□□ -1.72
TNFSF9P41273 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
TNFSF9P41273 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.32□□□□□ -1.72
TNFSF9P41273 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.32□□□□□ -1.72
TNFSF9P41273 AC091516.1-201ENST00000549191 703 ntBASIC4.32□□□□□ -1.72
TNFSF9P41273 MIR4286-201ENST00000580651 93 ntBASIC4.32□□□□□ -1.72
TNFSF9P41273 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.32□□□□□ -1.72
TNFSF9P41273 AL592436.1-201ENST00000605135 558 ntBASIC4.32□□□□□ -1.72
TNFSF9P41273 AC012603.1-201ENST00000606424 528 ntBASIC4.32□□□□□ -1.72
TNFSF9P41273 AL353600.1-201ENST00000608148 251 ntBASIC4.32□□□□□ -1.72
TNFSF9P41273 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.32□□□□□ -1.72
TNFSF9P41273 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TNFSF9P41273 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TNFSF9P41273 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
TNFSF9P41273 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.32□□□□□ -1.72
TNFSF9P41273 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TNFSF9P41273 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
TNFSF9P41273 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TNFSF9P41273 AC083843.3-201ENST00000623679 2186 ntBASIC4.31□□□□□ -1.72
TNFSF9P41273 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TNFSF9P41273 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
TNFSF9P41273 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.31□□□□□ -1.72
TNFSF9P41273 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TNFSF9P41273 RNU4-7P-201ENST00000364758 141 ntBASIC4.31□□□□□ -1.72
TNFSF9P41273 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
TNFSF9P41273 MIR513A2-201ENST00000385249 127 ntBASIC4.31□□□□□ -1.72
TNFSF9P41273 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
TNFSF9P41273 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.31□□□□□ -1.72
TNFSF9P41273 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.31□□□□□ -1.72
TNFSF9P41273 AL450992.3-201ENST00000413192 568 ntBASIC4.31□□□□□ -1.72
TNFSF9P41273 AC093084.1-201ENST00000424233 687 ntBASIC4.31□□□□□ -1.72
TNFSF9P41273 RPL7P2-201ENST00000427639 268 ntBASIC4.31□□□□□ -1.72
TNFSF9P41273 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.31□□□□□ -1.72
TNFSF9P41273 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.31□□□□□ -1.72
TNFSF9P41273 MTND2P2-201ENST00000434633 945 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms