Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HADHAP40939 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HADHAP40939 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
HADHAP40939 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
HADHAP40939 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
HADHAP40939 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HADHAP40939 OR52B1P-201ENST00000316506 909 ntBASIC4.83□□□□□ -1.64
HADHAP40939 RN7SKP104-201ENST00000362605 328 ntBASIC4.83□□□□□ -1.64
HADHAP40939 RNU5B-1-201ENST00000363286 116 ntBASIC4.83□□□□□ -1.64
HADHAP40939 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HADHAP40939 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.83□□□□□ -1.64
HADHAP40939 VDAC1P9-201ENST00000412766 841 ntBASIC4.83□□□□□ -1.64
HADHAP40939 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.83□□□□□ -1.64
HADHAP40939 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.83□□□□□ -1.64
HADHAP40939 LIPT1P1-201ENST00000415870 1186 ntBASIC4.83□□□□□ -1.64
HADHAP40939 LINC00993-201ENST00000420453 540 ntBASIC4.83□□□□□ -1.64
HADHAP40939 ZNF736P7Y-201ENST00000425158 820 ntBASIC4.83□□□□□ -1.64
HADHAP40939 RPL21P110-201ENST00000433345 446 ntBASIC4.83□□□□□ -1.64
HADHAP40939 RPS17P8-201ENST00000434525 335 ntBASIC4.83□□□□□ -1.64
HADHAP40939 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.83□□□□□ -1.64
HADHAP40939 AL929288.2-201ENST00000446368 407 ntBASIC4.83□□□□□ -1.64
HADHAP40939 AL162388.1-201ENST00000450912 352 ntBASIC4.83□□□□□ -1.64
HADHAP40939 AC234781.3-201ENST00000452540 973 ntBASIC4.83□□□□□ -1.64
HADHAP40939 RPS3AP41-201ENST00000462701 778 ntBASIC4.83□□□□□ -1.64
HADHAP40939 AC092905.1-201ENST00000467527 949 ntBASIC4.83□□□□□ -1.64
HADHAP40939 AC104689.1-201ENST00000473356 768 ntBASIC4.83□□□□□ -1.64
HADHAP40939 RPL7P16-201ENST00000479738 738 ntBASIC4.83□□□□□ -1.64
HADHAP40939 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.83□□□□□ -1.64
HADHAP40939 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.83□□□□□ -1.64
HADHAP40939 NDUFB4P12-201ENST00000513465 390 ntBASIC4.83□□□□□ -1.64
HADHAP40939 AC110775.1-201ENST00000513721 462 ntBASIC4.83□□□□□ -1.64
HADHAP40939 AC008494.2-201ENST00000514544 370 ntBASIC4.83□□□□□ -1.64
HADHAP40939 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC4.83□□□□□ -1.64
HADHAP40939 AC023825.1-201ENST00000566704 1030 ntBASIC4.83□□□□□ -1.64
HADHAP40939 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC4.83□□□□□ -1.64
HADHAP40939 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.83□□□□□ -1.64
HADHAP40939 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.83□□□□□ -1.64
HADHAP40939 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.83□□□□□ -1.64
HADHAP40939 AC011492.1-201ENST00000600023 315 ntBASIC4.83□□□□□ -1.64
HADHAP40939 AC099785.1-201ENST00000605697 437 ntBASIC4.83□□□□□ -1.64
HADHAP40939 AC100827.5-201ENST00000615883 426 ntBASIC4.83□□□□□ -1.64
HADHAP40939 AL512427.1-201ENST00000618593 349 ntBASIC4.83□□□□□ -1.64
HADHAP40939 AL022401.1-201ENST00000619498 108 ntBASIC4.83□□□□□ -1.64
HADHAP40939 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.83□□□□□ -1.64
HADHAP40939 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.83□□□□□ -1.64
HADHAP40939 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
HADHAP40939 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HADHAP40939 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.83□□□□□ -1.64
HADHAP40939 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HADHAP40939 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.83□□□□□ -1.64
HADHAP40939 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HADHAP40939 AL445487.1-201ENST00000415694 1580 ntBASIC4.82□□□□□ -1.64
HADHAP40939 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HADHAP40939 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HADHAP40939 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
HADHAP40939 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HADHAP40939 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HADHAP40939 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HADHAP40939 ZFRP1-201ENST00000457579 2970 ntBASIC4.82□□□□□ -1.64
HADHAP40939 TLK1P1-201ENST00000456760 2440 ntBASIC4.82□□□□□ -1.64
HADHAP40939 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HADHAP40939 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.82□□□□□ -1.64
HADHAP40939 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
HADHAP40939 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
HADHAP40939 COX6B1P1-201ENST00000415962 213 ntBASIC4.82□□□□□ -1.64
HADHAP40939 AC246680.2-201ENST00000422106 389 ntBASIC4.82□□□□□ -1.64
HADHAP40939 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.82□□□□□ -1.64
HADHAP40939 AC007559.1-201ENST00000428736 355 ntBASIC4.82□□□□□ -1.64
HADHAP40939 RPS3AP53-201ENST00000454716 778 ntBASIC4.82□□□□□ -1.64
HADHAP40939 AURKAPS2-201ENST00000454983 333 ntBASIC4.82□□□□□ -1.64
HADHAP40939 AC092324.1-201ENST00000468671 324 ntBASIC4.82□□□□□ -1.64
HADHAP40939 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC4.82□□□□□ -1.64
HADHAP40939 AC119751.4-201ENST00000507498 357 ntBASIC4.82□□□□□ -1.64
HADHAP40939 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.82□□□□□ -1.64
HADHAP40939 RNA5SP464-201ENST00000516251 108 ntBASIC4.82□□□□□ -1.64
HADHAP40939 RNA5SP392-201ENST00000516905 112 ntBASIC4.82□□□□□ -1.64
HADHAP40939 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.82□□□□□ -1.64
HADHAP40939 AC010376.1-201ENST00000522101 334 ntBASIC4.82□□□□□ -1.64
HADHAP40939 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.82□□□□□ -1.64
HADHAP40939 GCSHP4-201ENST00000538792 439 ntBASIC4.82□□□□□ -1.64
HADHAP40939 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.82□□□□□ -1.64
HADHAP40939 MIR4480-201ENST00000582492 71 ntBASIC4.82□□□□□ -1.64
HADHAP40939 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.82□□□□□ -1.64
HADHAP40939 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC4.82□□□□□ -1.64
HADHAP40939 AC093765.1-201ENST00000603758 881 ntBASIC4.82□□□□□ -1.64
HADHAP40939 AC233280.2-201ENST00000603917 1070 ntBASIC4.82□□□□□ -1.64
HADHAP40939 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC4.82□□□□□ -1.64
HADHAP40939 AC243756.2-201ENST00000618406 463 ntBASIC4.82□□□□□ -1.64
HADHAP40939 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC4.82□□□□□ -1.64
HADHAP40939 AL596275.2-204ENST00000641628 552 ntBASIC4.82□□□□□ -1.64
HADHAP40939 AL596275.2-206ENST00000641957 626 ntBASIC4.82□□□□□ -1.64
HADHAP40939 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.82□□□□□ -1.64
HADHAP40939 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.82□□□□□ -1.64
HADHAP40939 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
HADHAP40939 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
HADHAP40939 MAPK10-303ENST00000641324 3959 ntBASIC4.81□□□□□ -1.64
HADHAP40939 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.81□□□□□ -1.64
HADHAP40939 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HADHAP40939 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
HADHAP40939 RN7SKP149-201ENST00000363008 344 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms