Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC6.6□□□□□ -1.35
LIG1P18858 AC005730.3-201ENST00000583067 366 ntBASIC6.6□□□□□ -1.35
LIG1P18858 AC009994.1-201ENST00000606889 253 ntBASIC6.6□□□□□ -1.35
LIG1P18858 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC6.6□□□□□ -1.35
LIG1P18858 AC010133.1-201ENST00000615809 842 ntBASIC6.6□□□□□ -1.35
LIG1P18858 U6.107-201ENST00000637108 79 ntBASIC6.6□□□□□ -1.35
LIG1P18858 OR52B5P-202ENST00000641118 1110 ntBASIC6.6□□□□□ -1.35
LIG1P18858 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
LIG1P18858 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
LIG1P18858 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
LIG1P18858 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC6.6□□□□□ -1.35
LIG1P18858 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
LIG1P18858 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
LIG1P18858 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
LIG1P18858 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
LIG1P18858 AL590763.1-201ENST00000398297 1545 ntBASIC6.6□□□□□ -1.35
LIG1P18858 AC239868.2-201ENST00000564237 4527 ntBASIC6.6□□□□□ -1.35
LIG1P18858 MAPK10-338ENST00000641647 3362 ntBASIC6.6□□□□□ -1.35
LIG1P18858 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
LIG1P18858 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
LIG1P18858 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
LIG1P18858 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.35
LIG1P18858 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.59□□□□□ -1.35
LIG1P18858 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC6.59□□□□□ -1.35
LIG1P18858 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.59□□□□□ -1.35
LIG1P18858 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
LIG1P18858 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
LIG1P18858 DCAF13P3-201ENST00000561147 1334 ntBASIC6.59□□□□□ -1.35
LIG1P18858 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
LIG1P18858 AC103591.2-201ENST00000265259 766 ntBASIC6.59□□□□□ -1.35
LIG1P18858 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
LIG1P18858 RNU6-1339P-201ENST00000363574 91 ntBASIC6.59□□□□□ -1.35
LIG1P18858 RNU6-452P-201ENST00000384406 107 ntBASIC6.59□□□□□ -1.35
LIG1P18858 IL6-203ENST00000401651 539 ntTSL 2 BASIC6.59□□□□□ -1.35
LIG1P18858 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.59□□□□□ -1.35
LIG1P18858 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
LIG1P18858 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC6.59□□□□□ -1.35
LIG1P18858 MTCO2P11-201ENST00000431069 680 ntBASIC6.59□□□□□ -1.35
LIG1P18858 AL365184.2-201ENST00000431139 435 ntBASIC6.59□□□□□ -1.35
LIG1P18858 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC6.59□□□□□ -1.35
LIG1P18858 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC6.59□□□□□ -1.35
LIG1P18858 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC6.59□□□□□ -1.35
LIG1P18858 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC6.59□□□□□ -1.35
LIG1P18858 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
LIG1P18858 AC092989.1-201ENST00000481235 277 ntBASIC6.59□□□□□ -1.35
LIG1P18858 RN7SL193P-201ENST00000491708 276 ntBASIC6.59□□□□□ -1.35
LIG1P18858 AC108941.1-201ENST00000502853 530 ntBASIC6.59□□□□□ -1.35
LIG1P18858 AC105384.2-201ENST00000508433 640 ntBASIC6.59□□□□□ -1.35
LIG1P18858 RPL7L1P4-201ENST00000513004 707 ntBASIC6.59□□□□□ -1.35
LIG1P18858 ATG10-208ENST00000513634 618 ntTSL 2 BASIC6.59□□□□□ -1.35
LIG1P18858 SNORA20.3-201ENST00000516880 132 ntBASIC6.59□□□□□ -1.35
LIG1P18858 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC6.59□□□□□ -1.35
LIG1P18858 CDC42P3-201ENST00000518493 633 ntBASIC6.59□□□□□ -1.35
LIG1P18858 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
LIG1P18858 AP002453.2-201ENST00000533503 320 ntBASIC6.59□□□□□ -1.35
LIG1P18858 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC6.59□□□□□ -1.35
LIG1P18858 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC6.59□□□□□ -1.35
LIG1P18858 AC004217.3-201ENST00000551552 878 ntBASIC6.59□□□□□ -1.35
LIG1P18858 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.59□□□□□ -1.35
LIG1P18858 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.35
LIG1P18858 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.59□□□□□ -1.35
LIG1P18858 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC6.59□□□□□ -1.35
LIG1P18858 AC019322.1-201ENST00000571869 389 ntBASIC6.59□□□□□ -1.35
LIG1P18858 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
LIG1P18858 MIR4776-2-201ENST00000580204 80 ntBASIC6.59□□□□□ -1.35
LIG1P18858 AC090236.2-201ENST00000587933 1101 ntBASIC6.59□□□□□ -1.35
LIG1P18858 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.59□□□□□ -1.35
LIG1P18858 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC6.59□□□□□ -1.35
LIG1P18858 SEPT7P9-203ENST00000604116 343 ntBASIC6.59□□□□□ -1.35
LIG1P18858 AL390208.1-201ENST00000605885 644 ntBASIC6.59□□□□□ -1.35
LIG1P18858 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.59□□□□□ -1.35
LIG1P18858 MIR6809-201ENST00000612189 116 ntBASIC6.59□□□□□ -1.35
LIG1P18858 AC091834.1-201ENST00000614543 472 ntBASIC6.59□□□□□ -1.35
LIG1P18858 AC073348.1-201ENST00000623002 331 ntBASIC6.59□□□□□ -1.35
LIG1P18858 AC129778.1-202ENST00000623812 261 ntBASIC6.59□□□□□ -1.35
LIG1P18858 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC6.59□□□□□ -1.35
LIG1P18858 AL591379.1-207ENST00000635982 261 ntBASIC6.59□□□□□ -1.35
LIG1P18858 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.59□□□□□ -1.35
LIG1P18858 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
LIG1P18858 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
LIG1P18858 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
LIG1P18858 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.35
LIG1P18858 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
LIG1P18858 AC012254.3-201ENST00000591183 2117 ntBASIC6.59□□□□□ -1.35
LIG1P18858 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
LIG1P18858 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
LIG1P18858 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
LIG1P18858 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
LIG1P18858 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC6.58□□□□□ -1.36
LIG1P18858 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC6.58□□□□□ -1.36
LIG1P18858 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC6.58□□□□□ -1.36
LIG1P18858 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.58□□□□□ -1.36
LIG1P18858 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.58□□□□□ -1.36
LIG1P18858 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
LIG1P18858 Y_RNA.9-201ENST00000362354 101 ntBASIC6.58□□□□□ -1.36
LIG1P18858 RN7SKP145-201ENST00000363291 303 ntBASIC6.58□□□□□ -1.36
LIG1P18858 RNA5SP510-201ENST00000364697 99 ntBASIC6.58□□□□□ -1.36
LIG1P18858 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
LIG1P18858 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
LIG1P18858 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 136.4 ms