Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC018690.1-201ENST00000608144 626 ntBASIC5.63□□□□□ -1.51
HLA-DOAP06340 AC009237.15-201ENST00000610252 501 ntBASIC5.63□□□□□ -1.51
HLA-DOAP06340 AL031658.2-201ENST00000616850 651 ntBASIC5.63□□□□□ -1.51
HLA-DOAP06340 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.63□□□□□ -1.51
HLA-DOAP06340 AL157770.1-201ENST00000623049 439 ntBASIC5.63□□□□□ -1.51
HLA-DOAP06340 AC098679.5-201ENST00000624394 571 ntBASIC5.63□□□□□ -1.51
HLA-DOAP06340 MIR1322-201ENST00000638013 71 ntBASIC5.63□□□□□ -1.51
HLA-DOAP06340 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-DOAP06340 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.63□□□□□ -1.51
HLA-DOAP06340 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-DOAP06340 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
HLA-DOAP06340 AC004817.4-201ENST00000602396 3625 ntBASIC5.63□□□□□ -1.51
HLA-DOAP06340 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-DOAP06340 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-DOAP06340 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
HLA-DOAP06340 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-DOAP06340 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
HLA-DOAP06340 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-DOAP06340 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
HLA-DOAP06340 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.63□□□□□ -1.51
HLA-DOAP06340 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HLA-DOAP06340 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.62□□□□□ -1.51
HLA-DOAP06340 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HLA-DOAP06340 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.62□□□□□ -1.51
HLA-DOAP06340 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
HLA-DOAP06340 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
HLA-DOAP06340 UBE2Q2P1-202ENST00000354771 883 ntBASIC5.62□□□□□ -1.51
HLA-DOAP06340 Y_RNA.201-201ENST00000364052 96 ntBASIC5.62□□□□□ -1.51
HLA-DOAP06340 RNU4-75P-201ENST00000364621 146 ntBASIC5.62□□□□□ -1.51
HLA-DOAP06340 AL672167.2-201ENST00000377164 879 ntBASIC5.62□□□□□ -1.51
HLA-DOAP06340 AC233289.1-201ENST00000403700 508 ntBASIC5.62□□□□□ -1.51
HLA-DOAP06340 FCF1P5-201ENST00000406490 482 ntBASIC5.62□□□□□ -1.51
HLA-DOAP06340 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC5.62□□□□□ -1.51
HLA-DOAP06340 AC140479.3-201ENST00000418944 1126 ntBASIC5.62□□□□□ -1.51
HLA-DOAP06340 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC5.62□□□□□ -1.51
HLA-DOAP06340 C4BPAP2-201ENST00000428434 478 ntBASIC5.62□□□□□ -1.51
HLA-DOAP06340 RPL35AP21-201ENST00000437667 333 ntBASIC5.62□□□□□ -1.51
HLA-DOAP06340 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.62□□□□□ -1.51
HLA-DOAP06340 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC5.62□□□□□ -1.51
HLA-DOAP06340 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.62□□□□□ -1.51
HLA-DOAP06340 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.62□□□□□ -1.51
HLA-DOAP06340 H2AFZP5-201ENST00000446960 382 ntBASIC5.62□□□□□ -1.51
HLA-DOAP06340 AL162591.2-201ENST00000449634 317 ntBASIC5.62□□□□□ -1.51
HLA-DOAP06340 AC079168.2-201ENST00000453977 416 ntBASIC5.62□□□□□ -1.51
HLA-DOAP06340 RPS20P4-201ENST00000461659 355 ntBASIC5.62□□□□□ -1.51
HLA-DOAP06340 PPP1R11P1-201ENST00000486095 376 ntBASIC5.62□□□□□ -1.51
HLA-DOAP06340 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC5.62□□□□□ -1.51
HLA-DOAP06340 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
HLA-DOAP06340 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.62□□□□□ -1.51
HLA-DOAP06340 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HLA-DOAP06340 HMGB1P1-201ENST00000522557 636 ntBASIC5.62□□□□□ -1.51
HLA-DOAP06340 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC5.62□□□□□ -1.51
HLA-DOAP06340 AC027807.1-201ENST00000559921 996 ntBASIC5.62□□□□□ -1.51
HLA-DOAP06340 AC093249.4-201ENST00000564755 259 ntBASIC5.62□□□□□ -1.51
HLA-DOAP06340 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC5.62□□□□□ -1.51
HLA-DOAP06340 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
HLA-DOAP06340 AC007599.1-201ENST00000568688 1174 ntBASIC5.62□□□□□ -1.51
HLA-DOAP06340 AC127024.5-201ENST00000580085 462 ntBASIC5.62□□□□□ -1.51
HLA-DOAP06340 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC5.62□□□□□ -1.51
HLA-DOAP06340 AC068790.6-201ENST00000602558 258 ntBASIC5.62□□□□□ -1.51
HLA-DOAP06340 DEFB131E-202ENST00000602581 683 ntBASIC5.62□□□□□ -1.51
HLA-DOAP06340 RPL26P30-202ENST00000602923 645 ntBASIC5.62□□□□□ -1.51
HLA-DOAP06340 AC004987.4-201ENST00000603383 338 ntBASIC5.62□□□□□ -1.51
HLA-DOAP06340 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC5.62□□□□□ -1.51
HLA-DOAP06340 RPL23AP61-201ENST00000623642 466 ntBASIC5.62□□□□□ -1.51
HLA-DOAP06340 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC5.62□□□□□ -1.51
HLA-DOAP06340 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.62□□□□□ -1.51
HLA-DOAP06340 AC093536.2-201ENST00000565257 1406 ntBASIC5.62□□□□□ -1.51
HLA-DOAP06340 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
HLA-DOAP06340 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HLA-DOAP06340 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
HLA-DOAP06340 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HLA-DOAP06340 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.62□□□□□ -1.51
HLA-DOAP06340 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
HLA-DOAP06340 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
HLA-DOAP06340 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
HLA-DOAP06340 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-DOAP06340 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-DOAP06340 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
HLA-DOAP06340 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-DOAP06340 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
HLA-DOAP06340 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
HLA-DOAP06340 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-DOAP06340 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC5.61□□□□□ -1.51
HLA-DOAP06340 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-DOAP06340 SNORA71.2-201ENST00000364941 134 ntBASIC5.61□□□□□ -1.51
HLA-DOAP06340 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-DOAP06340 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-DOAP06340 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-DOAP06340 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.61□□□□□ -1.51
HLA-DOAP06340 FABP12P1-201ENST00000401911 322 ntBASIC5.61□□□□□ -1.51
HLA-DOAP06340 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
HLA-DOAP06340 RPL31-204ENST00000409038 817 ntTSL 2 BASIC5.61□□□□□ -1.51
HLA-DOAP06340 RNU4-74P-201ENST00000411280 161 ntBASIC5.61□□□□□ -1.51
HLA-DOAP06340 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC5.61□□□□□ -1.51
HLA-DOAP06340 TEX41-202ENST00000414256 604 ntTSL 5 BASIC5.61□□□□□ -1.51
HLA-DOAP06340 MTCO1P21-201ENST00000416634 589 ntBASIC5.61□□□□□ -1.51
HLA-DOAP06340 EIF4A1P1-201ENST00000420241 934 ntBASIC5.61□□□□□ -1.51
HLA-DOAP06340 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC5.61□□□□□ -1.51
HLA-DOAP06340 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms