Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 CALM1P2-201ENST00000452941 448 ntBASIC4.64□□□□□ -1.67
CHRNA1P02708 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.64□□□□□ -1.67
CHRNA1P02708 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.64□□□□□ -1.67
CHRNA1P02708 RNA5SP246-201ENST00000458909 119 ntBASIC4.64□□□□□ -1.67
CHRNA1P02708 RN7SL132P-201ENST00000478131 296 ntBASIC4.64□□□□□ -1.67
CHRNA1P02708 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.64□□□□□ -1.67
CHRNA1P02708 FTH1P21-201ENST00000512179 511 ntBASIC4.64□□□□□ -1.67
CHRNA1P02708 SNORA67.7-201ENST00000516664 135 ntBASIC4.64□□□□□ -1.67
CHRNA1P02708 AC067904.2-201ENST00000517322 1283 ntBASIC4.64□□□□□ -1.67
CHRNA1P02708 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.64□□□□□ -1.67
CHRNA1P02708 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CHRNA1P02708 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CHRNA1P02708 AC092868.3-201ENST00000560515 784 ntBASIC4.64□□□□□ -1.67
CHRNA1P02708 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.64□□□□□ -1.67
CHRNA1P02708 AC053481.4-201ENST00000583164 216 ntBASIC4.64□□□□□ -1.67
CHRNA1P02708 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.64□□□□□ -1.67
CHRNA1P02708 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.64□□□□□ -1.67
CHRNA1P02708 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC4.64□□□□□ -1.67
CHRNA1P02708 AC005034.4-201ENST00000603612 899 ntBASIC4.64□□□□□ -1.67
CHRNA1P02708 MIR92B-201ENST00000607575 96 ntBASIC4.64□□□□□ -1.67
CHRNA1P02708 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CHRNA1P02708 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.64□□□□□ -1.67
CHRNA1P02708 AL356863.1-201ENST00000623378 1080 ntBASIC4.64□□□□□ -1.67
CHRNA1P02708 AC019080.5-201ENST00000624891 757 ntBASIC4.64□□□□□ -1.67
CHRNA1P02708 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CHRNA1P02708 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.64□□□□□ -1.67
CHRNA1P02708 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.64□□□□□ -1.67
CHRNA1P02708 AC017104.4-201ENST00000636283 1592 ntBASIC4.64□□□□□ -1.67
CHRNA1P02708 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
CHRNA1P02708 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
CHRNA1P02708 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.64□□□□□ -1.67
CHRNA1P02708 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
CHRNA1P02708 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CHRNA1P02708 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
CHRNA1P02708 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.63□□□□□ -1.67
CHRNA1P02708 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CHRNA1P02708 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.63□□□□□ -1.67
CHRNA1P02708 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CHRNA1P02708 IL6STP1-201ENST00000346911 1020 ntBASIC4.63□□□□□ -1.67
CHRNA1P02708 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CHRNA1P02708 ATP5F1P3-201ENST00000397213 657 ntBASIC4.63□□□□□ -1.67
CHRNA1P02708 MIR1911-201ENST00000410783 80 ntBASIC4.63□□□□□ -1.67
CHRNA1P02708 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.63□□□□□ -1.67
CHRNA1P02708 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.63□□□□□ -1.67
CHRNA1P02708 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.63□□□□□ -1.67
CHRNA1P02708 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.63□□□□□ -1.67
CHRNA1P02708 AF213884.1-201ENST00000488102 463 ntBASIC4.63□□□□□ -1.67
CHRNA1P02708 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.63□□□□□ -1.67
CHRNA1P02708 AC021146.3-201ENST00000511911 260 ntBASIC4.63□□□□□ -1.67
CHRNA1P02708 ACTR6P1-201ENST00000514311 1104 ntBASIC4.63□□□□□ -1.67
CHRNA1P02708 RNU6-751P-201ENST00000516382 101 ntBASIC4.63□□□□□ -1.67
CHRNA1P02708 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.63□□□□□ -1.67
CHRNA1P02708 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC4.63□□□□□ -1.67
CHRNA1P02708 AC006064.5-201ENST00000541782 248 ntBASIC4.63□□□□□ -1.67
CHRNA1P02708 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.63□□□□□ -1.67
CHRNA1P02708 MIR3158-1-201ENST00000583596 81 ntBASIC4.63□□□□□ -1.67
CHRNA1P02708 BNIP3P33-201ENST00000598912 569 ntBASIC4.63□□□□□ -1.67
CHRNA1P02708 AC017076.1-201ENST00000607613 578 ntBASIC4.63□□□□□ -1.67
CHRNA1P02708 AC006133.1-201ENST00000617106 264 ntBASIC4.63□□□□□ -1.67
CHRNA1P02708 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
CHRNA1P02708 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.63□□□□□ -1.67
CHRNA1P02708 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CHRNA1P02708 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.63□□□□□ -1.67
CHRNA1P02708 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
CHRNA1P02708 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CHRNA1P02708 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
CHRNA1P02708 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CHRNA1P02708 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CHRNA1P02708 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CHRNA1P02708 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CHRNA1P02708 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.62□□□□□ -1.67
CHRNA1P02708 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
CHRNA1P02708 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CHRNA1P02708 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CHRNA1P02708 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CHRNA1P02708 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CHRNA1P02708 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.62□□□□□ -1.67
CHRNA1P02708 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
CHRNA1P02708 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.62□□□□□ -1.67
CHRNA1P02708 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CHRNA1P02708 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CHRNA1P02708 SNORD66.1-201ENST00000391230 76 ntBASIC4.62□□□□□ -1.67
CHRNA1P02708 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.62□□□□□ -1.67
CHRNA1P02708 AP000357.1-201ENST00000409926 1165 ntBASIC4.62□□□□□ -1.67
CHRNA1P02708 RN7SKP167-201ENST00000411047 285 ntBASIC4.62□□□□□ -1.67
CHRNA1P02708 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.62□□□□□ -1.67
CHRNA1P02708 OR8F1P-201ENST00000425243 930 ntBASIC4.62□□□□□ -1.67
CHRNA1P02708 MTCO1P57-201ENST00000432182 261 ntBASIC4.62□□□□□ -1.67
CHRNA1P02708 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.62□□□□□ -1.67
CHRNA1P02708 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.62□□□□□ -1.67
CHRNA1P02708 CACYBPP1-201ENST00000438592 684 ntBASIC4.62□□□□□ -1.67
CHRNA1P02708 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.62□□□□□ -1.67
CHRNA1P02708 IFNWP4-201ENST00000453148 294 ntBASIC4.62□□□□□ -1.67
CHRNA1P02708 VN1R105P-201ENST00000486595 910 ntBASIC4.62□□□□□ -1.67
CHRNA1P02708 DEFB109F-201ENST00000491870 277 ntBASIC4.62□□□□□ -1.67
CHRNA1P02708 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.62□□□□□ -1.67
CHRNA1P02708 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CHRNA1P02708 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.62□□□□□ -1.67
CHRNA1P02708 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
CHRNA1P02708 HMGB3P13-201ENST00000511263 607 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms