Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC5.62□□□□□ -1.51
COL3A1P02461 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC5.62□□□□□ -1.51
COL3A1P02461 IGLV3-26-201ENST00000520756 302 ntBASIC5.62□□□□□ -1.51
COL3A1P02461 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC5.62□□□□□ -1.51
COL3A1P02461 AC021451.1-201ENST00000523498 1129 ntBASIC5.62□□□□□ -1.51
COL3A1P02461 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC5.62□□□□□ -1.51
COL3A1P02461 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC5.62□□□□□ -1.51
COL3A1P02461 AC007599.1-201ENST00000568688 1174 ntBASIC5.62□□□□□ -1.51
COL3A1P02461 AC012213.3-201ENST00000577199 777 ntBASIC5.62□□□□□ -1.51
COL3A1P02461 AC022655.2-201ENST00000577280 318 ntBASIC5.62□□□□□ -1.51
COL3A1P02461 AC061975.8-201ENST00000587058 721 ntBASIC5.62□□□□□ -1.51
COL3A1P02461 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC5.62□□□□□ -1.51
COL3A1P02461 IPO5P1-202ENST00000600039 287 ntBASIC5.62□□□□□ -1.51
COL3A1P02461 AC135178.6-201ENST00000605314 398 ntBASIC5.62□□□□□ -1.51
COL3A1P02461 AC092653.1-201ENST00000608509 531 ntBASIC5.62□□□□□ -1.51
COL3A1P02461 5S_rRNA.16-201ENST00000612928 119 ntBASIC5.62□□□□□ -1.51
COL3A1P02461 AL163051.2-201ENST00000618976 735 ntBASIC5.62□□□□□ -1.51
COL3A1P02461 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC5.62□□□□□ -1.51
COL3A1P02461 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC5.62□□□□□ -1.51
COL3A1P02461 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.62□□□□□ -1.51
COL3A1P02461 AP000641.1-201ENST00000531988 1639 ntBASIC5.62□□□□□ -1.51
COL3A1P02461 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
COL3A1P02461 AC126323.6-202ENST00000568092 3511 ntBASIC5.62□□□□□ -1.51
COL3A1P02461 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL3A1P02461 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC5.62□□□□□ -1.51
COL3A1P02461 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
COL3A1P02461 AP001273.1-201ENST00000624493 3152 ntBASIC5.61□□□□□ -1.51
COL3A1P02461 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.61□□□□□ -1.51
COL3A1P02461 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
COL3A1P02461 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
COL3A1P02461 MIR372-201ENST00000362225 67 ntBASIC5.61□□□□□ -1.51
COL3A1P02461 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
COL3A1P02461 SNORA57.1-201ENST00000391227 145 ntBASIC5.61□□□□□ -1.51
COL3A1P02461 MIR1179-201ENST00000408703 91 ntBASIC5.61□□□□□ -1.51
COL3A1P02461 RN7SKP182-201ENST00000410772 298 ntBASIC5.61□□□□□ -1.51
COL3A1P02461 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC5.61□□□□□ -1.51
COL3A1P02461 AC073464.3-201ENST00000422564 712 ntBASIC5.61□□□□□ -1.51
COL3A1P02461 MTND4LP14-201ENST00000429447 288 ntBASIC5.61□□□□□ -1.51
COL3A1P02461 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC5.61□□□□□ -1.51
COL3A1P02461 NPM1P48-201ENST00000436002 853 ntBASIC5.61□□□□□ -1.51
COL3A1P02461 ARL4AP3-201ENST00000441452 574 ntBASIC5.61□□□□□ -1.51
COL3A1P02461 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC5.61□□□□□ -1.51
COL3A1P02461 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC5.61□□□□□ -1.51
COL3A1P02461 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.61□□□□□ -1.51
COL3A1P02461 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.61□□□□□ -1.51
COL3A1P02461 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC5.61□□□□□ -1.51
COL3A1P02461 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC5.61□□□□□ -1.51
COL3A1P02461 AC010486.3-201ENST00000511602 785 ntBASIC5.61□□□□□ -1.51
COL3A1P02461 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC5.61□□□□□ -1.51
COL3A1P02461 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC5.61□□□□□ -1.51
COL3A1P02461 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC5.61□□□□□ -1.51
COL3A1P02461 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC5.61□□□□□ -1.51
COL3A1P02461 ARL1-211ENST00000551828 776 ntTSL 5 BASIC5.61□□□□□ -1.51
COL3A1P02461 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC5.61□□□□□ -1.51
COL3A1P02461 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.61□□□□□ -1.51
COL3A1P02461 AC234775.3-201ENST00000564612 656 ntBASIC5.61□□□□□ -1.51
COL3A1P02461 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC5.61□□□□□ -1.51
COL3A1P02461 CCDC58P3-201ENST00000590792 430 ntBASIC5.61□□□□□ -1.51
COL3A1P02461 BNIP3P33-201ENST00000598912 569 ntBASIC5.61□□□□□ -1.51
COL3A1P02461 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC5.61□□□□□ -1.51
COL3A1P02461 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.61□□□□□ -1.51
COL3A1P02461 AP002791.1-201ENST00000623291 381 ntBASIC5.61□□□□□ -1.51
COL3A1P02461 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
COL3A1P02461 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
COL3A1P02461 NF1-214ENST00000490416 1329 ntTSL 3 BASIC5.61□□□□□ -1.51
COL3A1P02461 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
COL3A1P02461 MFSD8-242ENST00000641690 4199 ntBASIC5.6□□□□□ -1.51
COL3A1P02461 MTND4P34-201ENST00000572715 1371 ntBASIC5.6□□□□□ -1.51
COL3A1P02461 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL3A1P02461 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL3A1P02461 AC067945.1-201ENST00000342609 618 ntBASIC5.6□□□□□ -1.51
COL3A1P02461 RNA5SP130-201ENST00000364431 114 ntBASIC5.6□□□□□ -1.51
COL3A1P02461 RNU11-4P-201ENST00000391149 133 ntBASIC5.6□□□□□ -1.51
COL3A1P02461 SNORA81-201ENST00000408493 178 ntBASIC5.6□□□□□ -1.51
COL3A1P02461 EIF4A1P3-201ENST00000411521 244 ntBASIC5.6□□□□□ -1.51
COL3A1P02461 AC022028.1-201ENST00000412054 408 ntBASIC5.6□□□□□ -1.51
COL3A1P02461 AC016907.1-201ENST00000419483 435 ntBASIC5.6□□□□□ -1.51
COL3A1P02461 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5.6□□□□□ -1.51
COL3A1P02461 RPL23AP38-201ENST00000423801 469 ntBASIC5.6□□□□□ -1.51
COL3A1P02461 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.6□□□□□ -1.51
COL3A1P02461 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.6□□□□□ -1.51
COL3A1P02461 NDUFA5P10-201ENST00000432147 357 ntBASIC5.6□□□□□ -1.51
COL3A1P02461 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC5.6□□□□□ -1.51
COL3A1P02461 CEACAMP1-201ENST00000434624 1035 ntBASIC5.6□□□□□ -1.51
COL3A1P02461 AC114755.5-201ENST00000447760 831 ntBASIC5.6□□□□□ -1.51
COL3A1P02461 ZNF886P-201ENST00000450781 723 ntBASIC5.6□□□□□ -1.51
COL3A1P02461 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
COL3A1P02461 RPL21P129-201ENST00000491732 478 ntBASIC5.6□□□□□ -1.51
COL3A1P02461 MTCO1P35-201ENST00000515270 228 ntBASIC5.6□□□□□ -1.51
COL3A1P02461 AC008694.2-201ENST00000517591 306 ntBASIC5.6□□□□□ -1.51
COL3A1P02461 OR10D4P-201ENST00000525892 951 ntBASIC5.6□□□□□ -1.51
COL3A1P02461 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
COL3A1P02461 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
COL3A1P02461 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC5.6□□□□□ -1.51
COL3A1P02461 AL020997.2-201ENST00000602607 184 ntBASIC5.6□□□□□ -1.51
COL3A1P02461 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
COL3A1P02461 AC068792.1-201ENST00000621354 417 ntBASIC5.6□□□□□ -1.51
COL3A1P02461 AP006248.3-201ENST00000623580 594 ntBASIC5.6□□□□□ -1.51
COL3A1P02461 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.6□□□□□ -1.51
COL3A1P02461 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms