Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HCN1O60741 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HCN1O60741 FTH1P2-201ENST00000466086 412 ntBASIC4.11□□□□□ -1.75
HCN1O60741 RPL23AP2-201ENST00000471227 466 ntBASIC4.11□□□□□ -1.75
HCN1O60741 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.11□□□□□ -1.75
HCN1O60741 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.11□□□□□ -1.75
HCN1O60741 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.11□□□□□ -1.75
HCN1O60741 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.11□□□□□ -1.75
HCN1O60741 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HCN1O60741 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HCN1O60741 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.11□□□□□ -1.75
HCN1O60741 BPIFA4P-203ENST00000603168 689 ntBASIC4.11□□□□□ -1.75
HCN1O60741 AC012557.1-201ENST00000607115 611 ntBASIC4.11□□□□□ -1.75
HCN1O60741 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.11□□□□□ -1.75
HCN1O60741 AC107308.1-201ENST00000615897 301 ntBASIC4.11□□□□□ -1.75
HCN1O60741 AL138721.1-201ENST00000616756 179 ntBASIC4.11□□□□□ -1.75
HCN1O60741 MIR4727-201ENST00000622232 55 ntBASIC4.11□□□□□ -1.75
HCN1O60741 AL118508.4-201ENST00000624142 1176 ntBASIC4.11□□□□□ -1.75
HCN1O60741 AL356121.2-201ENST00000624715 780 ntBASIC4.11□□□□□ -1.75
HCN1O60741 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.11□□□□□ -1.75
HCN1O60741 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HCN1O60741 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.11□□□□□ -1.75
HCN1O60741 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HCN1O60741 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HCN1O60741 AC139769.1-204ENST00000472297 1931 ntBASIC4.11□□□□□ -1.75
HCN1O60741 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
HCN1O60741 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
HCN1O60741 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.11□□□□□ -1.75
HCN1O60741 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HCN1O60741 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
HCN1O60741 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HCN1O60741 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HCN1O60741 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.1□□□□□ -1.75
HCN1O60741 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.1□□□□□ -1.75
HCN1O60741 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HCN1O60741 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
HCN1O60741 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
HCN1O60741 OR4K17-201ENST00000315543 1032 ntBASIC4.1□□□□□ -1.75
HCN1O60741 AC067945.1-201ENST00000342609 618 ntBASIC4.1□□□□□ -1.75
HCN1O60741 RNA5SP509-201ENST00000364577 119 ntBASIC4.1□□□□□ -1.75
HCN1O60741 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HCN1O60741 FABP12P1-201ENST00000401911 322 ntBASIC4.1□□□□□ -1.75
HCN1O60741 RNU4-25P-201ENST00000410569 230 ntBASIC4.1□□□□□ -1.75
HCN1O60741 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HCN1O60741 RAD23BP1-201ENST00000421404 1227 ntBASIC4.1□□□□□ -1.75
HCN1O60741 AC009965.2-201ENST00000425328 970 ntBASIC4.1□□□□□ -1.75
HCN1O60741 EIF2S2P3-201ENST00000428356 999 ntBASIC4.1□□□□□ -1.75
HCN1O60741 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.1□□□□□ -1.75
HCN1O60741 AC073143.1-201ENST00000436316 395 ntBASIC4.1□□□□□ -1.75
HCN1O60741 HLA-N-201ENST00000437516 135 ntBASIC4.1□□□□□ -1.75
HCN1O60741 RPL23AP93-201ENST00000440847 484 ntBASIC4.1□□□□□ -1.75
HCN1O60741 AL157827.1-201ENST00000447622 132 ntBASIC4.1□□□□□ -1.75
HCN1O60741 RPL23AP24-201ENST00000458203 385 ntBASIC4.1□□□□□ -1.75
HCN1O60741 AC011276.1-201ENST00000469688 323 ntBASIC4.1□□□□□ -1.75
HCN1O60741 AC010683.1-201ENST00000473673 378 ntBASIC4.1□□□□□ -1.75
HCN1O60741 AC026979.1-201ENST00000492525 396 ntBASIC4.1□□□□□ -1.75
HCN1O60741 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.1□□□□□ -1.75
HCN1O60741 RN7SL810P-201ENST00000493031 276 ntBASIC4.1□□□□□ -1.75
HCN1O60741 AC108157.1-201ENST00000510511 539 ntBASIC4.1□□□□□ -1.75
HCN1O60741 AC093770.1-201ENST00000511559 571 ntBASIC4.1□□□□□ -1.75
HCN1O60741 HNRNPKP5-201ENST00000515300 253 ntBASIC4.1□□□□□ -1.75
HCN1O60741 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.1□□□□□ -1.75
HCN1O60741 HIGD1AP18-201ENST00000520730 278 ntBASIC4.1□□□□□ -1.75
HCN1O60741 AC090281.1-201ENST00000523019 276 ntBASIC4.1□□□□□ -1.75
HCN1O60741 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.1□□□□□ -1.75
HCN1O60741 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.1□□□□□ -1.75
HCN1O60741 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
HCN1O60741 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.1□□□□□ -1.75
HCN1O60741 PARP1P2-201ENST00000556806 195 ntBASIC4.1□□□□□ -1.75
HCN1O60741 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.1□□□□□ -1.75
HCN1O60741 CYP4A43P-201ENST00000568156 121 ntBASIC4.1□□□□□ -1.75
HCN1O60741 AC010680.3-201ENST00000604215 520 ntBASIC4.1□□□□□ -1.75
HCN1O60741 AC135803.1-201ENST00000608748 565 ntBASIC4.1□□□□□ -1.75
HCN1O60741 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HCN1O60741 MIR6758-201ENST00000620653 63 ntBASIC4.1□□□□□ -1.75
HCN1O60741 AP003497.2-201ENST00000624220 967 ntBASIC4.1□□□□□ -1.75
HCN1O60741 AC006065.6-201ENST00000625201 545 ntBASIC4.1□□□□□ -1.75
HCN1O60741 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
HCN1O60741 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
HCN1O60741 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
HCN1O60741 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.1□□□□□ -1.75
HCN1O60741 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HCN1O60741 DDX6P1-205ENST00000441966 1436 ntBASIC4.1□□□□□ -1.75
HCN1O60741 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HCN1O60741 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HCN1O60741 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HCN1O60741 AC017002.4-201ENST00000604721 1525 ntBASIC4.1□□□□□ -1.75
HCN1O60741 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.1□□□□□ -1.75
HCN1O60741 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.1□□□□□ -1.75
HCN1O60741 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.1□□□□□ -1.75
HCN1O60741 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.1□□□□□ -1.75
HCN1O60741 AC025031.4-201ENST00000621248 3271 ntBASIC4.1□□□□□ -1.75
HCN1O60741 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.1□□□□□ -1.75
HCN1O60741 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
HCN1O60741 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
HCN1O60741 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
HCN1O60741 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
HCN1O60741 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.09□□□□□ -1.75
HCN1O60741 RNU6-40P-201ENST00000384254 107 ntBASIC4.09□□□□□ -1.75
HCN1O60741 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms