Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC4.41□□□□□ -1.7
ZIC3O60481 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.41□□□□□ -1.7
ZIC3O60481 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.41□□□□□ -1.7
ZIC3O60481 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.41□□□□□ -1.7
ZIC3O60481 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.41□□□□□ -1.7
ZIC3O60481 AC091685.2-201ENST00000454924 864 ntBASIC4.41□□□□□ -1.7
ZIC3O60481 AC063943.1-201ENST00000465434 453 ntBASIC4.41□□□□□ -1.7
ZIC3O60481 AC011979.1-201ENST00000472300 483 ntBASIC4.41□□□□□ -1.7
ZIC3O60481 AC083982.1-201ENST00000485679 344 ntBASIC4.41□□□□□ -1.7
ZIC3O60481 IGLV2-34-201ENST00000490007 283 ntBASIC4.41□□□□□ -1.7
ZIC3O60481 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.41□□□□□ -1.7
ZIC3O60481 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.41□□□□□ -1.7
ZIC3O60481 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC4.41□□□□□ -1.7
ZIC3O60481 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
ZIC3O60481 IGBP1P5-201ENST00000507524 1000 ntBASIC4.41□□□□□ -1.7
ZIC3O60481 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.41□□□□□ -1.7
ZIC3O60481 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.41□□□□□ -1.7
ZIC3O60481 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC4.41□□□□□ -1.7
ZIC3O60481 SNORA3.4-201ENST00000515969 96 ntBASIC4.41□□□□□ -1.7
ZIC3O60481 snoU109.6-201ENST00000516831 118 ntBASIC4.41□□□□□ -1.7
ZIC3O60481 Y_RNA.719-201ENST00000517156 106 ntBASIC4.41□□□□□ -1.7
ZIC3O60481 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC4.41□□□□□ -1.7
ZIC3O60481 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
ZIC3O60481 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC4.41□□□□□ -1.7
ZIC3O60481 AL049839.1-201ENST00000556151 657 ntBASIC4.41□□□□□ -1.7
ZIC3O60481 AGGF1P6-201ENST00000569213 976 ntBASIC4.41□□□□□ -1.7
ZIC3O60481 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.41□□□□□ -1.7
ZIC3O60481 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.41□□□□□ -1.7
ZIC3O60481 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.41□□□□□ -1.7
ZIC3O60481 AL353778.1-201ENST00000603149 408 ntBASIC4.41□□□□□ -1.7
ZIC3O60481 AP003392.5-201ENST00000607857 415 ntBASIC4.41□□□□□ -1.7
ZIC3O60481 AL157770.1-201ENST00000623049 439 ntBASIC4.41□□□□□ -1.7
ZIC3O60481 AC138965.3-201ENST00000623875 498 ntBASIC4.41□□□□□ -1.7
ZIC3O60481 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.41□□□□□ -1.7
ZIC3O60481 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
ZIC3O60481 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.41□□□□□ -1.7
ZIC3O60481 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.41□□□□□ -1.7
ZIC3O60481 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.41□□□□□ -1.7
ZIC3O60481 AC046144.1-201ENST00000478559 1853 ntBASIC4.41□□□□□ -1.7
ZIC3O60481 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.4□□□□□ -1.7
ZIC3O60481 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
ZIC3O60481 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
ZIC3O60481 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.4□□□□□ -1.7
ZIC3O60481 AC012321.1-201ENST00000561622 1588 ntBASIC4.4□□□□□ -1.7
ZIC3O60481 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
ZIC3O60481 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
ZIC3O60481 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
ZIC3O60481 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.4□□□□□ -1.7
ZIC3O60481 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
ZIC3O60481 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
ZIC3O60481 RN7SKP103-201ENST00000363848 320 ntBASIC4.4□□□□□ -1.71
ZIC3O60481 RNA5SP87-201ENST00000384155 118 ntBASIC4.4□□□□□ -1.71
ZIC3O60481 MIR937-201ENST00000401271 86 ntBASIC4.4□□□□□ -1.71
ZIC3O60481 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.4□□□□□ -1.71
ZIC3O60481 AC114755.2-201ENST00000413520 361 ntBASIC4.4□□□□□ -1.71
ZIC3O60481 AL139128.1-201ENST00000413921 941 ntBASIC4.4□□□□□ -1.71
ZIC3O60481 AC004074.1-201ENST00000421810 1063 ntBASIC4.4□□□□□ -1.71
ZIC3O60481 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.4□□□□□ -1.71
ZIC3O60481 RPL21P43-201ENST00000425440 472 ntBASIC4.4□□□□□ -1.71
ZIC3O60481 AL360081.1-201ENST00000428299 555 ntBASIC4.4□□□□□ -1.71
ZIC3O60481 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.4□□□□□ -1.71
ZIC3O60481 DYNLL1P7-201ENST00000429273 258 ntBASIC4.4□□□□□ -1.71
ZIC3O60481 MTCO1P3-201ENST00000429327 192 ntBASIC4.4□□□□□ -1.71
ZIC3O60481 UBE2V1P5-201ENST00000440070 405 ntBASIC4.4□□□□□ -1.71
ZIC3O60481 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.4□□□□□ -1.71
ZIC3O60481 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC4.4□□□□□ -1.71
ZIC3O60481 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
ZIC3O60481 AC079776.3-201ENST00000450665 370 ntBASIC4.4□□□□□ -1.71
ZIC3O60481 NECAP1P2-201ENST00000455668 727 ntBASIC4.4□□□□□ -1.71
ZIC3O60481 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC4.4□□□□□ -1.71
ZIC3O60481 RPL23AP71-201ENST00000470966 469 ntBASIC4.4□□□□□ -1.71
ZIC3O60481 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.4□□□□□ -1.71
ZIC3O60481 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.4□□□□□ -1.71
ZIC3O60481 OR7H2P-201ENST00000513483 306 ntBASIC4.4□□□□□ -1.71
ZIC3O60481 RNU6-347P-201ENST00000516658 105 ntBASIC4.4□□□□□ -1.71
ZIC3O60481 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.4□□□□□ -1.71
ZIC3O60481 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.4□□□□□ -1.71
ZIC3O60481 OR4C2P-201ENST00000530855 1064 ntBASIC4.4□□□□□ -1.71
ZIC3O60481 AC007834.2-201ENST00000536310 343 ntBASIC4.4□□□□□ -1.71
ZIC3O60481 OSBPL9P5-201ENST00000542581 171 ntBASIC4.4□□□□□ -1.71
ZIC3O60481 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.4□□□□□ -1.71
ZIC3O60481 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.4□□□□□ -1.71
ZIC3O60481 AL354943.1-201ENST00000572103 781 ntBASIC4.4□□□□□ -1.71
ZIC3O60481 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.4□□□□□ -1.71
ZIC3O60481 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
ZIC3O60481 AC008088.1-201ENST00000580993 280 ntBASIC4.4□□□□□ -1.71
ZIC3O60481 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC4.4□□□□□ -1.71
ZIC3O60481 AC124856.1-201ENST00000600819 896 ntBASIC4.4□□□□□ -1.71
ZIC3O60481 NTAN1P1-201ENST00000603150 646 ntBASIC4.4□□□□□ -1.71
ZIC3O60481 AL121932.1-201ENST00000605542 214 ntBASIC4.4□□□□□ -1.71
ZIC3O60481 AL353726.1-201ENST00000614041 1000 ntBASIC4.4□□□□□ -1.71
ZIC3O60481 AC018926.3-201ENST00000618841 406 ntBASIC4.4□□□□□ -1.71
ZIC3O60481 AC104623.2-202ENST00000623477 4002 ntBASIC4.4□□□□□ -1.71
ZIC3O60481 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
ZIC3O60481 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.4□□□□□ -1.71
ZIC3O60481 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
ZIC3O60481 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
ZIC3O60481 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
ZIC3O60481 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
ZIC3O60481 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms