Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AC073387.2-201ENST00000604797 784 ntBASIC4.83□□□□□ -1.64
SMAD6O43541 AC015849.2-201ENST00000605738 409 ntBASIC4.83□□□□□ -1.64
SMAD6O43541 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC4.83□□□□□ -1.64
SMAD6O43541 AC090948.2-201ENST00000607363 564 ntBASIC4.83□□□□□ -1.64
SMAD6O43541 VN1R9P-201ENST00000614184 867 ntBASIC4.83□□□□□ -1.64
SMAD6O43541 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.83□□□□□ -1.64
SMAD6O43541 AC068792.1-201ENST00000621354 417 ntBASIC4.83□□□□□ -1.64
SMAD6O43541 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.83□□□□□ -1.64
SMAD6O43541 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC4.83□□□□□ -1.64
SMAD6O43541 BMS1P21-201ENST00000634565 365 ntBASIC4.83□□□□□ -1.64
SMAD6O43541 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SMAD6O43541 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.83□□□□□ -1.64
SMAD6O43541 AC010329.2-201ENST00000595195 2737 ntBASIC4.83□□□□□ -1.64
SMAD6O43541 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
SMAD6O43541 AC007382.1-201ENST00000624376 2618 ntBASIC4.83□□□□□ -1.64
SMAD6O43541 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.83□□□□□ -1.64
SMAD6O43541 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
SMAD6O43541 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
SMAD6O43541 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
SMAD6O43541 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SMAD6O43541 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.82□□□□□ -1.64
SMAD6O43541 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
SMAD6O43541 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
SMAD6O43541 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
SMAD6O43541 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SMAD6O43541 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SMAD6O43541 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.82□□□□□ -1.64
SMAD6O43541 AL356317.1-201ENST00000396110 1436 ntBASIC4.82□□□□□ -1.64
SMAD6O43541 AC021755.1-201ENST00000559747 1447 ntBASIC4.82□□□□□ -1.64
SMAD6O43541 AC093536.2-201ENST00000565257 1406 ntBASIC4.82□□□□□ -1.64
SMAD6O43541 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.82□□□□□ -1.64
SMAD6O43541 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SMAD6O43541 SUCLA2P2-201ENST00000417269 1309 ntBASIC4.82□□□□□ -1.64
SMAD6O43541 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
SMAD6O43541 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
SMAD6O43541 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
SMAD6O43541 MIR192-201ENST00000384915 110 ntBASIC4.82□□□□□ -1.64
SMAD6O43541 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
SMAD6O43541 MIR298-201ENST00000401212 88 ntBASIC4.82□□□□□ -1.64
SMAD6O43541 RANP4-201ENST00000413361 655 ntBASIC4.82□□□□□ -1.64
SMAD6O43541 AL449283.1-202ENST00000418249 604 ntBASIC4.82□□□□□ -1.64
SMAD6O43541 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC4.82□□□□□ -1.64
SMAD6O43541 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.82□□□□□ -1.64
SMAD6O43541 AL359265.2-201ENST00000434367 631 ntBASIC4.82□□□□□ -1.64
SMAD6O43541 RPL12P46-201ENST00000436610 195 ntBASIC4.82□□□□□ -1.64
SMAD6O43541 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.82□□□□□ -1.64
SMAD6O43541 AC016831.4-201ENST00000438302 307 ntBASIC4.82□□□□□ -1.64
SMAD6O43541 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.82□□□□□ -1.64
SMAD6O43541 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.82□□□□□ -1.64
SMAD6O43541 RPL31P20-201ENST00000449593 360 ntBASIC4.82□□□□□ -1.64
SMAD6O43541 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC4.82□□□□□ -1.64
SMAD6O43541 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.82□□□□□ -1.64
SMAD6O43541 CEACAMP6-201ENST00000452007 574 ntBASIC4.82□□□□□ -1.64
SMAD6O43541 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.82□□□□□ -1.64
SMAD6O43541 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC4.82□□□□□ -1.64
SMAD6O43541 RN7SL354P-201ENST00000469282 294 ntBASIC4.82□□□□□ -1.64
SMAD6O43541 SYT14P1-201ENST00000481459 721 ntBASIC4.82□□□□□ -1.64
SMAD6O43541 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.82□□□□□ -1.64
SMAD6O43541 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC4.82□□□□□ -1.64
SMAD6O43541 RNU1-6P-201ENST00000516290 144 ntBASIC4.82□□□□□ -1.64
SMAD6O43541 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.82□□□□□ -1.64
SMAD6O43541 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.82□□□□□ -1.64
SMAD6O43541 IGKV1-32-201ENST00000519290 311 ntBASIC4.82□□□□□ -1.64
SMAD6O43541 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4.82□□□□□ -1.64
SMAD6O43541 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.82□□□□□ -1.64
SMAD6O43541 FKBP1BP1-201ENST00000553366 325 ntBASIC4.82□□□□□ -1.64
SMAD6O43541 AL110118.1-201ENST00000553543 400 ntBASIC4.82□□□□□ -1.64
SMAD6O43541 AC068446.3-201ENST00000555285 382 ntBASIC4.82□□□□□ -1.64
SMAD6O43541 AC079075.1-201ENST00000559543 878 ntBASIC4.82□□□□□ -1.64
SMAD6O43541 MIR4330-201ENST00000579077 105 ntBASIC4.82□□□□□ -1.64
SMAD6O43541 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC4.82□□□□□ -1.64
SMAD6O43541 AC124283.4-201ENST00000581815 456 ntBASIC4.82□□□□□ -1.64
SMAD6O43541 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.82□□□□□ -1.64
SMAD6O43541 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.82□□□□□ -1.64
SMAD6O43541 AC079880.2-201ENST00000603790 1213 ntBASIC4.82□□□□□ -1.64
SMAD6O43541 AC092608.3-201ENST00000625017 386 ntBASIC4.82□□□□□ -1.64
SMAD6O43541 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.82□□□□□ -1.64
SMAD6O43541 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
SMAD6O43541 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.82□□□□□ -1.64
SMAD6O43541 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.82□□□□□ -1.64
SMAD6O43541 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SMAD6O43541 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SMAD6O43541 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.82□□□□□ -1.64
SMAD6O43541 AC017002.4-201ENST00000604721 1525 ntBASIC4.82□□□□□ -1.64
SMAD6O43541 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SMAD6O43541 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SMAD6O43541 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.81□□□□□ -1.64
SMAD6O43541 MTND4P10-201ENST00000446199 1363 ntBASIC4.81□□□□□ -1.64
SMAD6O43541 DDX18P5-201ENST00000534547 1306 ntBASIC4.81□□□□□ -1.64
SMAD6O43541 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SMAD6O43541 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SMAD6O43541 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
SMAD6O43541 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SMAD6O43541 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
SMAD6O43541 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
SMAD6O43541 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.81□□□□□ -1.64
SMAD6O43541 RNU6-481P-201ENST00000384194 107 ntBASIC4.81□□□□□ -1.64
SMAD6O43541 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
SMAD6O43541 AL049697.2-201ENST00000403708 294 ntBASIC4.81□□□□□ -1.64
SMAD6O43541 ARL4AP5-201ENST00000404372 599 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms