Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TMX2-CTNND1H3BSU7 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.12□□□□□ -1.75
TMX2-CTNND1H3BSU7 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TMX2-CTNND1H3BSU7 ASNSP1-201ENST00000518311 1939 ntBASIC4.11□□□□□ -1.75
TMX2-CTNND1H3BSU7 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TMX2-CTNND1H3BSU7 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.11□□□□□ -1.75
TMX2-CTNND1H3BSU7 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
TMX2-CTNND1H3BSU7 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TMX2-CTNND1H3BSU7 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
TMX2-CTNND1H3BSU7 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
TMX2-CTNND1H3BSU7 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TMX2-CTNND1H3BSU7 RNU1-15P-201ENST00000353977 144 ntBASIC4.11□□□□□ -1.75
TMX2-CTNND1H3BSU7 SNORA62.3-201ENST00000365110 153 ntBASIC4.11□□□□□ -1.75
TMX2-CTNND1H3BSU7 RNA5SP283-201ENST00000365604 119 ntBASIC4.11□□□□□ -1.75
TMX2-CTNND1H3BSU7 RNU1-63P-201ENST00000383902 164 ntBASIC4.11□□□□□ -1.75
TMX2-CTNND1H3BSU7 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
TMX2-CTNND1H3BSU7 AC007068.1-201ENST00000396690 844 ntBASIC4.11□□□□□ -1.75
TMX2-CTNND1H3BSU7 RNA5SP36-201ENST00000410197 133 ntBASIC4.11□□□□□ -1.75
TMX2-CTNND1H3BSU7 RN7SKP33-201ENST00000410942 340 ntBASIC4.11□□□□□ -1.75
TMX2-CTNND1H3BSU7 SNORA74C-2-201ENST00000411179 201 ntBASIC4.11□□□□□ -1.75
TMX2-CTNND1H3BSU7 NRBF2P2-201ENST00000413087 861 ntBASIC4.11□□□□□ -1.75
TMX2-CTNND1H3BSU7 MFSD13B-201ENST00000420133 1290 ntBASIC4.11□□□□□ -1.75
TMX2-CTNND1H3BSU7 YY1P1-201ENST00000427625 668 ntBASIC4.11□□□□□ -1.75
TMX2-CTNND1H3BSU7 AC073335.1-201ENST00000427776 363 ntBASIC4.11□□□□□ -1.75
TMX2-CTNND1H3BSU7 YWHAEP5-201ENST00000431545 765 ntBASIC4.11□□□□□ -1.75
TMX2-CTNND1H3BSU7 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.11□□□□□ -1.75
TMX2-CTNND1H3BSU7 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TMX2-CTNND1H3BSU7 PTMAP3-201ENST00000447474 330 ntBASIC4.11□□□□□ -1.75
TMX2-CTNND1H3BSU7 AL162151.2-201ENST00000448875 158 ntBASIC4.11□□□□□ -1.75
TMX2-CTNND1H3BSU7 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.11□□□□□ -1.75
TMX2-CTNND1H3BSU7 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.11□□□□□ -1.75
TMX2-CTNND1H3BSU7 CCNHP1-201ENST00000513311 678 ntBASIC4.11□□□□□ -1.75
TMX2-CTNND1H3BSU7 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.11□□□□□ -1.75
TMX2-CTNND1H3BSU7 IGLVIV-53-201ENST00000520107 367 ntBASIC4.11□□□□□ -1.75
TMX2-CTNND1H3BSU7 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.11□□□□□ -1.75
TMX2-CTNND1H3BSU7 AL352979.3-201ENST00000553515 247 ntBASIC4.11□□□□□ -1.75
TMX2-CTNND1H3BSU7 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC4.11□□□□□ -1.75
TMX2-CTNND1H3BSU7 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.11□□□□□ -1.75
TMX2-CTNND1H3BSU7 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.11□□□□□ -1.75
TMX2-CTNND1H3BSU7 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.11□□□□□ -1.75
TMX2-CTNND1H3BSU7 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TMX2-CTNND1H3BSU7 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.11□□□□□ -1.75
TMX2-CTNND1H3BSU7 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TMX2-CTNND1H3BSU7 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TMX2-CTNND1H3BSU7 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
TMX2-CTNND1H3BSU7 Z82217.1-201ENST00000625157 8149 ntBASIC4.11□□□□□ -1.75
TMX2-CTNND1H3BSU7 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
TMX2-CTNND1H3BSU7 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
TMX2-CTNND1H3BSU7 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.1□□□□□ -1.75
TMX2-CTNND1H3BSU7 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
TMX2-CTNND1H3BSU7 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TMX2-CTNND1H3BSU7 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
TMX2-CTNND1H3BSU7 AC012020.1-201ENST00000624541 1728 ntBASIC4.1□□□□□ -1.75
TMX2-CTNND1H3BSU7 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.1□□□□□ -1.75
TMX2-CTNND1H3BSU7 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
TMX2-CTNND1H3BSU7 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TMX2-CTNND1H3BSU7 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TMX2-CTNND1H3BSU7 AP000357.1-201ENST00000409926 1165 ntBASIC4.1□□□□□ -1.75
TMX2-CTNND1H3BSU7 RN7SKP159-201ENST00000410657 292 ntBASIC4.1□□□□□ -1.75
TMX2-CTNND1H3BSU7 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.1□□□□□ -1.75
TMX2-CTNND1H3BSU7 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
TMX2-CTNND1H3BSU7 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.1□□□□□ -1.75
TMX2-CTNND1H3BSU7 IPMKP1-201ENST00000425988 855 ntBASIC4.1□□□□□ -1.75
TMX2-CTNND1H3BSU7 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.1□□□□□ -1.75
TMX2-CTNND1H3BSU7 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.1□□□□□ -1.75
TMX2-CTNND1H3BSU7 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.1□□□□□ -1.75
TMX2-CTNND1H3BSU7 RNU6-775P-201ENST00000459318 96 ntBASIC4.1□□□□□ -1.75
TMX2-CTNND1H3BSU7 AC091959.2-201ENST00000477363 321 ntBASIC4.1□□□□□ -1.75
TMX2-CTNND1H3BSU7 TPT1P3-201ENST00000492841 512 ntBASIC4.1□□□□□ -1.75
TMX2-CTNND1H3BSU7 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TMX2-CTNND1H3BSU7 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.1□□□□□ -1.75
TMX2-CTNND1H3BSU7 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC4.1□□□□□ -1.75
TMX2-CTNND1H3BSU7 RNA5SP519-201ENST00000516480 119 ntBASIC4.1□□□□□ -1.75
TMX2-CTNND1H3BSU7 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
TMX2-CTNND1H3BSU7 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.1□□□□□ -1.75
TMX2-CTNND1H3BSU7 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.1□□□□□ -1.75
TMX2-CTNND1H3BSU7 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC4.1□□□□□ -1.75
TMX2-CTNND1H3BSU7 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.1□□□□□ -1.75
TMX2-CTNND1H3BSU7 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TMX2-CTNND1H3BSU7 AC010547.7-201ENST00000570323 333 ntBASIC4.1□□□□□ -1.75
TMX2-CTNND1H3BSU7 RN7SL600P-201ENST00000581811 299 ntBASIC4.1□□□□□ -1.75
TMX2-CTNND1H3BSU7 AC053481.4-201ENST00000583164 216 ntBASIC4.1□□□□□ -1.75
TMX2-CTNND1H3BSU7 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.1□□□□□ -1.75
TMX2-CTNND1H3BSU7 MIR6867-201ENST00000610636 67 ntBASIC4.1□□□□□ -1.75
TMX2-CTNND1H3BSU7 AC233309.1-201ENST00000619522 751 ntBASIC4.1□□□□□ -1.75
TMX2-CTNND1H3BSU7 FP325313.1-201ENST00000638228 703 ntBASIC4.1□□□□□ -1.75
TMX2-CTNND1H3BSU7 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
TMX2-CTNND1H3BSU7 AC107021.2-201ENST00000567714 2095 ntBASIC4.1□□□□□ -1.75
TMX2-CTNND1H3BSU7 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TMX2-CTNND1H3BSU7 AC100871.1-201ENST00000507871 1456 ntBASIC4.1□□□□□ -1.75
TMX2-CTNND1H3BSU7 AL031985.3-201ENST00000565390 2449 ntBASIC4.1□□□□□ -1.75
TMX2-CTNND1H3BSU7 USP9YP4-201ENST00000424401 1745 ntBASIC4.09□□□□□ -1.75
TMX2-CTNND1H3BSU7 FAM35DP-201ENST00000323387 2712 ntBASIC4.09□□□□□ -1.75
TMX2-CTNND1H3BSU7 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TMX2-CTNND1H3BSU7 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
TMX2-CTNND1H3BSU7 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
TMX2-CTNND1H3BSU7 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.09□□□□□ -1.75
TMX2-CTNND1H3BSU7 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
TMX2-CTNND1H3BSU7 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.09□□□□□ -1.75
TMX2-CTNND1H3BSU7 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms