Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC4.56□□□□□ -1.68
CGB1A6NKQ9 SNORA72.1-201ENST00000363485 129 ntBASIC4.56□□□□□ -1.68
CGB1A6NKQ9 SNORA4.1-201ENST00000364263 144 ntBASIC4.56□□□□□ -1.68
CGB1A6NKQ9 Y_RNA.311-201ENST00000365068 96 ntBASIC4.56□□□□□ -1.68
CGB1A6NKQ9 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
CGB1A6NKQ9 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.56□□□□□ -1.68
CGB1A6NKQ9 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.56□□□□□ -1.68
CGB1A6NKQ9 RNU6-348P-201ENST00000384386 107 ntBASIC4.56□□□□□ -1.68
CGB1A6NKQ9 Y_RNA.554-201ENST00000384672 102 ntBASIC4.56□□□□□ -1.68
CGB1A6NKQ9 SNORA68.2-201ENST00000391263 128 ntBASIC4.56□□□□□ -1.68
CGB1A6NKQ9 HIST1H3PS1-201ENST00000404612 417 ntBASIC4.56□□□□□ -1.68
CGB1A6NKQ9 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.56□□□□□ -1.68
CGB1A6NKQ9 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC4.56□□□□□ -1.68
CGB1A6NKQ9 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.56□□□□□ -1.68
CGB1A6NKQ9 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC4.56□□□□□ -1.68
CGB1A6NKQ9 AC245054.1-201ENST00000420944 258 ntBASIC4.56□□□□□ -1.68
CGB1A6NKQ9 MTCO3P1-205ENST00000422088 832 ntBASIC4.56□□□□□ -1.68
CGB1A6NKQ9 SLC44A3-AS1-205ENST00000424505 612 ntBASIC4.56□□□□□ -1.68
CGB1A6NKQ9 MTCO1P54-201ENST00000430139 712 ntBASIC4.56□□□□□ -1.68
CGB1A6NKQ9 BX276092.6-201ENST00000430476 250 ntBASIC4.56□□□□□ -1.68
CGB1A6NKQ9 USP12PX-201ENST00000432383 1057 ntBASIC4.56□□□□□ -1.68
CGB1A6NKQ9 AC000111.3-201ENST00000433478 193 ntBASIC4.56□□□□□ -1.68
CGB1A6NKQ9 AC007679.3-201ENST00000434035 414 ntBASIC4.56□□□□□ -1.68
CGB1A6NKQ9 NPM1P18-201ENST00000434232 732 ntBASIC4.56□□□□□ -1.68
CGB1A6NKQ9 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CGB1A6NKQ9 ATP6V1E1P1-201ENST00000439215 681 ntBASIC4.56□□□□□ -1.68
CGB1A6NKQ9 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC4.56□□□□□ -1.68
CGB1A6NKQ9 PAXBP1P1-201ENST00000449315 447 ntBASIC4.56□□□□□ -1.68
CGB1A6NKQ9 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC4.56□□□□□ -1.68
CGB1A6NKQ9 RFC5P1-201ENST00000454419 874 ntBASIC4.56□□□□□ -1.68
CGB1A6NKQ9 BX276092.8-201ENST00000455722 250 ntBASIC4.56□□□□□ -1.68
CGB1A6NKQ9 PPIAP21-201ENST00000464473 501 ntBASIC4.56□□□□□ -1.68
CGB1A6NKQ9 RPS7P6-201ENST00000485777 579 ntBASIC4.56□□□□□ -1.68
CGB1A6NKQ9 RN7SL57P-201ENST00000493687 290 ntBASIC4.56□□□□□ -1.68
CGB1A6NKQ9 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC4.56□□□□□ -1.68
CGB1A6NKQ9 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.56□□□□□ -1.68
CGB1A6NKQ9 OR5H5P-201ENST00000503164 928 ntBASIC4.56□□□□□ -1.68
CGB1A6NKQ9 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC4.56□□□□□ -1.68
CGB1A6NKQ9 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC4.56□□□□□ -1.68
CGB1A6NKQ9 AC098799.2-201ENST00000509466 868 ntBASIC4.56□□□□□ -1.68
CGB1A6NKQ9 RNU6-314P-201ENST00000516574 104 ntBASIC4.56□□□□□ -1.68
CGB1A6NKQ9 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.56□□□□□ -1.68
CGB1A6NKQ9 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CGB1A6NKQ9 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC4.56□□□□□ -1.68
CGB1A6NKQ9 AC137627.1-201ENST00000545761 289 ntBASIC4.56□□□□□ -1.68
CGB1A6NKQ9 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.56□□□□□ -1.68
CGB1A6NKQ9 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC4.56□□□□□ -1.68
CGB1A6NKQ9 AC007956.1-201ENST00000555623 542 ntBASIC4.56□□□□□ -1.68
CGB1A6NKQ9 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.56□□□□□ -1.68
CGB1A6NKQ9 FGF7P1-201ENST00000582820 288 ntBASIC4.56□□□□□ -1.68
CGB1A6NKQ9 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC4.56□□□□□ -1.68
CGB1A6NKQ9 AC078795.3-201ENST00000602913 472 ntBASIC4.56□□□□□ -1.68
CGB1A6NKQ9 NANOGP3-201ENST00000605855 286 ntBASIC4.56□□□□□ -1.68
CGB1A6NKQ9 AC128687.2-201ENST00000609657 566 ntBASIC4.56□□□□□ -1.68
CGB1A6NKQ9 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.56□□□□□ -1.68
CGB1A6NKQ9 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CGB1A6NKQ9 MIR6806-201ENST00000622141 64 ntBASIC4.56□□□□□ -1.68
CGB1A6NKQ9 AC015908.5-201ENST00000623289 343 ntBASIC4.56□□□□□ -1.68
CGB1A6NKQ9 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC4.56□□□□□ -1.68
CGB1A6NKQ9 MTND1P37-201ENST00000636562 264 ntBASIC4.56□□□□□ -1.68
CGB1A6NKQ9 OR2L1P-202ENST00000641567 1023 ntBASIC4.56□□□□□ -1.68
CGB1A6NKQ9 AC006206.1-201ENST00000544842 3387 ntBASIC4.56□□□□□ -1.68
CGB1A6NKQ9 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
CGB1A6NKQ9 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CGB1A6NKQ9 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.56□□□□□ -1.68
CGB1A6NKQ9 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.56□□□□□ -1.68
CGB1A6NKQ9 AL450326.2-201ENST00000421913 1962 ntBASIC4.56□□□□□ -1.68
CGB1A6NKQ9 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
CGB1A6NKQ9 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CGB1A6NKQ9 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CGB1A6NKQ9 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CGB1A6NKQ9 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC4.56□□□□□ -1.68
CGB1A6NKQ9 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC4.56□□□□□ -1.68
CGB1A6NKQ9 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CGB1A6NKQ9 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
CGB1A6NKQ9 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CGB1A6NKQ9 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.55□□□□□ -1.68
CGB1A6NKQ9 TEK-205ENST00000615002 4666 ntTSL 5 BASIC4.55□□□□□ -1.68
CGB1A6NKQ9 MTND5P26-201ENST00000426018 1752 ntBASIC4.55□□□□□ -1.68
CGB1A6NKQ9 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CGB1A6NKQ9 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
CGB1A6NKQ9 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
CGB1A6NKQ9 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CGB1A6NKQ9 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.55□□□□□ -1.68
CGB1A6NKQ9 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CGB1A6NKQ9 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CGB1A6NKQ9 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CGB1A6NKQ9 RNU1-150P-201ENST00000362491 162 ntBASIC4.55□□□□□ -1.68
CGB1A6NKQ9 RNA5SP453-201ENST00000362503 119 ntBASIC4.55□□□□□ -1.68
CGB1A6NKQ9 RNA5SP477-201ENST00000362639 119 ntBASIC4.55□□□□□ -1.68
CGB1A6NKQ9 RN7SKP185-201ENST00000362813 326 ntBASIC4.55□□□□□ -1.68
CGB1A6NKQ9 RNA5SP326-201ENST00000363209 110 ntBASIC4.55□□□□□ -1.68
CGB1A6NKQ9 RNU6-621P-201ENST00000364752 109 ntBASIC4.55□□□□□ -1.68
CGB1A6NKQ9 MIR525-201ENST00000384978 85 ntBASIC4.55□□□□□ -1.68
CGB1A6NKQ9 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CGB1A6NKQ9 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CGB1A6NKQ9 RNU2-6P-201ENST00000411404 190 ntBASIC4.55□□□□□ -1.68
CGB1A6NKQ9 AC096921.1-201ENST00000411661 375 ntBASIC4.55□□□□□ -1.68
CGB1A6NKQ9 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.55□□□□□ -1.68
CGB1A6NKQ9 USP9YP6-201ENST00000413550 854 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms