Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.26■□□□□ 0.67
VPS9D1Q9Y2B5 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.26■□□□□ 0.67
VPS9D1Q9Y2B5 NBPF21P-201ENST00000425093 1451 ntBASIC19.26■□□□□ 0.67
VPS9D1Q9Y2B5 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
VPS9D1Q9Y2B5 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.26■□□□□ 0.67
VPS9D1Q9Y2B5 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VPS9D1Q9Y2B5 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.26■□□□□ 0.67
VPS9D1Q9Y2B5 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
VPS9D1Q9Y2B5 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.26■□□□□ 0.67
VPS9D1Q9Y2B5 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
VPS9D1Q9Y2B5 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
VPS9D1Q9Y2B5 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.25■□□□□ 0.67
VPS9D1Q9Y2B5 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
VPS9D1Q9Y2B5 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
VPS9D1Q9Y2B5 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
VPS9D1Q9Y2B5 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VPS9D1Q9Y2B5 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VPS9D1Q9Y2B5 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
VPS9D1Q9Y2B5 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.25■□□□□ 0.67
VPS9D1Q9Y2B5 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
VPS9D1Q9Y2B5 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VPS9D1Q9Y2B5 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VPS9D1Q9Y2B5 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.25■□□□□ 0.67
VPS9D1Q9Y2B5 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.25■□□□□ 0.67
VPS9D1Q9Y2B5 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VPS9D1Q9Y2B5 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.25■□□□□ 0.67
VPS9D1Q9Y2B5 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.25■□□□□ 0.67
VPS9D1Q9Y2B5 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.25■□□□□ 0.67
VPS9D1Q9Y2B5 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.25■□□□□ 0.67
VPS9D1Q9Y2B5 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.25■□□□□ 0.67
VPS9D1Q9Y2B5 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.25■□□□□ 0.67
VPS9D1Q9Y2B5 MTDHP1-201ENST00000605323 784 ntBASIC19.25■□□□□ 0.67
VPS9D1Q9Y2B5 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
VPS9D1Q9Y2B5 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.25■□□□□ 0.67
VPS9D1Q9Y2B5 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
VPS9D1Q9Y2B5 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VPS9D1Q9Y2B5 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.25■□□□□ 0.67
VPS9D1Q9Y2B5 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
VPS9D1Q9Y2B5 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VPS9D1Q9Y2B5 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VPS9D1Q9Y2B5 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
VPS9D1Q9Y2B5 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
VPS9D1Q9Y2B5 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
VPS9D1Q9Y2B5 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
VPS9D1Q9Y2B5 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VPS9D1Q9Y2B5 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VPS9D1Q9Y2B5 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
VPS9D1Q9Y2B5 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.24■□□□□ 0.67
VPS9D1Q9Y2B5 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VPS9D1Q9Y2B5 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
VPS9D1Q9Y2B5 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
VPS9D1Q9Y2B5 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
VPS9D1Q9Y2B5 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
VPS9D1Q9Y2B5 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
VPS9D1Q9Y2B5 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VPS9D1Q9Y2B5 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.24■□□□□ 0.67
VPS9D1Q9Y2B5 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.24■□□□□ 0.67
VPS9D1Q9Y2B5 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.24■□□□□ 0.67
VPS9D1Q9Y2B5 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.24■□□□□ 0.67
VPS9D1Q9Y2B5 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.24■□□□□ 0.67
VPS9D1Q9Y2B5 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
VPS9D1Q9Y2B5 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
VPS9D1Q9Y2B5 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VPS9D1Q9Y2B5 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VPS9D1Q9Y2B5 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
VPS9D1Q9Y2B5 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.24■□□□□ 0.67
VPS9D1Q9Y2B5 AC018445.3-201ENST00000624177 1945 ntBASIC19.23■□□□□ 0.67
VPS9D1Q9Y2B5 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
VPS9D1Q9Y2B5 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VPS9D1Q9Y2B5 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VPS9D1Q9Y2B5 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
VPS9D1Q9Y2B5 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VPS9D1Q9Y2B5 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VPS9D1Q9Y2B5 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VPS9D1Q9Y2B5 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VPS9D1Q9Y2B5 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VPS9D1Q9Y2B5 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
VPS9D1Q9Y2B5 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.23■□□□□ 0.67
VPS9D1Q9Y2B5 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.23■□□□□ 0.67
VPS9D1Q9Y2B5 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.23■□□□□ 0.67
VPS9D1Q9Y2B5 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
VPS9D1Q9Y2B5 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VPS9D1Q9Y2B5 AC104417.2-201ENST00000562989 1793 ntBASIC19.23■□□□□ 0.67
VPS9D1Q9Y2B5 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
VPS9D1Q9Y2B5 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VPS9D1Q9Y2B5 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.23■□□□□ 0.67
VPS9D1Q9Y2B5 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
VPS9D1Q9Y2B5 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VPS9D1Q9Y2B5 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.23■□□□□ 0.67
VPS9D1Q9Y2B5 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VPS9D1Q9Y2B5 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
VPS9D1Q9Y2B5 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
VPS9D1Q9Y2B5 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
VPS9D1Q9Y2B5 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VPS9D1Q9Y2B5 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VPS9D1Q9Y2B5 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
VPS9D1Q9Y2B5 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.22■□□□□ 0.67
VPS9D1Q9Y2B5 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VPS9D1Q9Y2B5 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VPS9D1Q9Y2B5 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms