Protein–RNA interactions for Protein: Q8R1G6

Pdlim2, PDZ and LIM domain protein 2, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim2Q8R1G6 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pdlim2Q8R1G6 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Pdlim2Q8R1G6 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pdlim2Q8R1G6 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
Pdlim2Q8R1G6 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pdlim2Q8R1G6 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Pdlim2Q8R1G6 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pdlim2Q8R1G6 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pdlim2Q8R1G6 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.08■□□□□ 0.65
Pdlim2Q8R1G6 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pdlim2Q8R1G6 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
Pdlim2Q8R1G6 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.08■□□□□ 0.64
Pdlim2Q8R1G6 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pdlim2Q8R1G6 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Pdlim2Q8R1G6 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pdlim2Q8R1G6 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
Pdlim2Q8R1G6 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Pdlim2Q8R1G6 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pdlim2Q8R1G6 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
Pdlim2Q8R1G6 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pdlim2Q8R1G6 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pdlim2Q8R1G6 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pdlim2Q8R1G6 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC19.07■□□□□ 0.64
Pdlim2Q8R1G6 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pdlim2Q8R1G6 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pdlim2Q8R1G6 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.07■□□□□ 0.64
Pdlim2Q8R1G6 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pdlim2Q8R1G6 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pdlim2Q8R1G6 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pdlim2Q8R1G6 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pdlim2Q8R1G6 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Pdlim2Q8R1G6 Gm2399-201ENSMUST00000104944 225 ntBASIC19.07■□□□□ 0.64
Pdlim2Q8R1G6 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.07■□□□□ 0.64
Pdlim2Q8R1G6 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.07■□□□□ 0.64
Pdlim2Q8R1G6 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.07■□□□□ 0.64
Pdlim2Q8R1G6 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pdlim2Q8R1G6 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pdlim2Q8R1G6 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Pdlim2Q8R1G6 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pdlim2Q8R1G6 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pdlim2Q8R1G6 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pdlim2Q8R1G6 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Pdlim2Q8R1G6 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pdlim2Q8R1G6 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pdlim2Q8R1G6 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pdlim2Q8R1G6 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pdlim2Q8R1G6 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pdlim2Q8R1G6 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
Pdlim2Q8R1G6 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Pdlim2Q8R1G6 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pdlim2Q8R1G6 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pdlim2Q8R1G6 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pdlim2Q8R1G6 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pdlim2Q8R1G6 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pdlim2Q8R1G6 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pdlim2Q8R1G6 Gm45203-201ENSMUST00000206384 1831 ntBASIC19.06■□□□□ 0.64
Pdlim2Q8R1G6 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pdlim2Q8R1G6 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pdlim2Q8R1G6 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Pdlim2Q8R1G6 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pdlim2Q8R1G6 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Pdlim2Q8R1G6 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pdlim2Q8R1G6 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pdlim2Q8R1G6 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pdlim2Q8R1G6 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pdlim2Q8R1G6 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pdlim2Q8R1G6 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC19.05■□□□□ 0.64
Pdlim2Q8R1G6 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pdlim2Q8R1G6 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pdlim2Q8R1G6 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pdlim2Q8R1G6 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Pdlim2Q8R1G6 Gm44291-201ENSMUST00000203102 2865 ntBASIC19.05■□□□□ 0.64
Pdlim2Q8R1G6 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pdlim2Q8R1G6 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Pdlim2Q8R1G6 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pdlim2Q8R1G6 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pdlim2Q8R1G6 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Pdlim2Q8R1G6 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pdlim2Q8R1G6 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.05■□□□□ 0.64
Pdlim2Q8R1G6 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
Pdlim2Q8R1G6 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pdlim2Q8R1G6 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pdlim2Q8R1G6 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pdlim2Q8R1G6 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pdlim2Q8R1G6 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Pdlim2Q8R1G6 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pdlim2Q8R1G6 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pdlim2Q8R1G6 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
Pdlim2Q8R1G6 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pdlim2Q8R1G6 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC19.05■□□□□ 0.64
Pdlim2Q8R1G6 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pdlim2Q8R1G6 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Pdlim2Q8R1G6 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pdlim2Q8R1G6 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.04■□□□□ 0.64
Pdlim2Q8R1G6 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Pdlim2Q8R1G6 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pdlim2Q8R1G6 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Pdlim2Q8R1G6 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pdlim2Q8R1G6 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pdlim2Q8R1G6 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms