Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
Rfwd3Q8CIK8 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Rfwd3Q8CIK8 AC158538.1-201ENSMUST00000225870 294 ntBASIC15.62■□□□□ 0.09
Rfwd3Q8CIK8 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rfwd3Q8CIK8 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rfwd3Q8CIK8 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Rfwd3Q8CIK8 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rfwd3Q8CIK8 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.62■□□□□ 0.09
Rfwd3Q8CIK8 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Rfwd3Q8CIK8 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rfwd3Q8CIK8 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rfwd3Q8CIK8 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rfwd3Q8CIK8 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rfwd3Q8CIK8 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rfwd3Q8CIK8 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Rfwd3Q8CIK8 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.62■□□□□ 0.09
Rfwd3Q8CIK8 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Rfwd3Q8CIK8 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.61■□□□□ 0.09
Rfwd3Q8CIK8 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Rfwd3Q8CIK8 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rfwd3Q8CIK8 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rfwd3Q8CIK8 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC15.61■□□□□ 0.09
Rfwd3Q8CIK8 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Rfwd3Q8CIK8 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC15.61■□□□□ 0.09
Rfwd3Q8CIK8 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC15.61■□□□□ 0.09
Rfwd3Q8CIK8 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rfwd3Q8CIK8 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Rfwd3Q8CIK8 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rfwd3Q8CIK8 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Rfwd3Q8CIK8 Actl10-202ENSMUST00000226583 1501 ntBASIC15.61■□□□□ 0.09
Rfwd3Q8CIK8 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rfwd3Q8CIK8 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rfwd3Q8CIK8 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Rfwd3Q8CIK8 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rfwd3Q8CIK8 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Rfwd3Q8CIK8 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rfwd3Q8CIK8 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rfwd3Q8CIK8 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rfwd3Q8CIK8 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rfwd3Q8CIK8 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rfwd3Q8CIK8 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Rfwd3Q8CIK8 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rfwd3Q8CIK8 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rfwd3Q8CIK8 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rfwd3Q8CIK8 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.6■□□□□ 0.09
Rfwd3Q8CIK8 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Rfwd3Q8CIK8 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
Rfwd3Q8CIK8 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC15.6■□□□□ 0.09
Rfwd3Q8CIK8 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rfwd3Q8CIK8 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Rfwd3Q8CIK8 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC15.6■□□□□ 0.09
Rfwd3Q8CIK8 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rfwd3Q8CIK8 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rfwd3Q8CIK8 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rfwd3Q8CIK8 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rfwd3Q8CIK8 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.6■□□□□ 0.09
Rfwd3Q8CIK8 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC15.6■□□□□ 0.09
Rfwd3Q8CIK8 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.6■□□□□ 0.09
Rfwd3Q8CIK8 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Rfwd3Q8CIK8 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rfwd3Q8CIK8 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Rfwd3Q8CIK8 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rfwd3Q8CIK8 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rfwd3Q8CIK8 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rfwd3Q8CIK8 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rfwd3Q8CIK8 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rfwd3Q8CIK8 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rfwd3Q8CIK8 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rfwd3Q8CIK8 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rfwd3Q8CIK8 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rfwd3Q8CIK8 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rfwd3Q8CIK8 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rfwd3Q8CIK8 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rfwd3Q8CIK8 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.59■□□□□ 0.09
Rfwd3Q8CIK8 Cxcl14-202ENSMUST00000224801 1467 ntBASIC15.59■□□□□ 0.09
Rfwd3Q8CIK8 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Rfwd3Q8CIK8 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rfwd3Q8CIK8 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rfwd3Q8CIK8 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rfwd3Q8CIK8 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rfwd3Q8CIK8 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.59■□□□□ 0.09
Rfwd3Q8CIK8 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Rfwd3Q8CIK8 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Rfwd3Q8CIK8 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rfwd3Q8CIK8 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rfwd3Q8CIK8 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC15.59■□□□□ 0.09
Rfwd3Q8CIK8 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rfwd3Q8CIK8 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rfwd3Q8CIK8 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Rfwd3Q8CIK8 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rfwd3Q8CIK8 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rfwd3Q8CIK8 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Rfwd3Q8CIK8 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rfwd3Q8CIK8 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rfwd3Q8CIK8 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rfwd3Q8CIK8 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC15.59■□□□□ 0.09
Rfwd3Q8CIK8 Gm11620-201ENSMUST00000118770 1845 ntBASIC15.59■□□□□ 0.09
Rfwd3Q8CIK8 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rfwd3Q8CIK8 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.59■□□□□ 0.09
Rfwd3Q8CIK8 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms