Protein–RNA interactions for Protein: Q5T200

ZC3H13, Zinc finger CCCH domain-containing protein 13, humanhuman

Known RBP Predictions only

Length 1,668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H13Q5T200 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC28.23■■■□□ 2.11
ZC3H13Q5T200 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC28.23■■■□□ 2.11
ZC3H13Q5T200 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
ZC3H13Q5T200 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC28.22■■■□□ 2.11
ZC3H13Q5T200 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC28.22■■■□□ 2.11
ZC3H13Q5T200 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC28.22■■■□□ 2.11
ZC3H13Q5T200 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC28.22■■■□□ 2.11
ZC3H13Q5T200 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC28.22■■■□□ 2.11
ZC3H13Q5T200 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC28.22■■■□□ 2.11
ZC3H13Q5T200 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
ZC3H13Q5T200 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC28.21■■■□□ 2.11
ZC3H13Q5T200 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC28.21■■■□□ 2.11
ZC3H13Q5T200 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC28.21■■■□□ 2.11
ZC3H13Q5T200 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
ZC3H13Q5T200 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC28.21■■■□□ 2.11
ZC3H13Q5T200 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
ZC3H13Q5T200 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC28.21■■■□□ 2.11
ZC3H13Q5T200 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
ZC3H13Q5T200 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC28.21■■■□□ 2.11
ZC3H13Q5T200 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC28.21■■■□□ 2.11
ZC3H13Q5T200 AC036111.1-201ENST00000533973 1582 ntBASIC28.21■■■□□ 2.11
ZC3H13Q5T200 PRELID1P1-202ENST00000567272 903 ntBASIC28.21■■■□□ 2.11
ZC3H13Q5T200 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC28.21■■■□□ 2.11
ZC3H13Q5T200 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
ZC3H13Q5T200 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC28.21■■■□□ 2.11
ZC3H13Q5T200 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
ZC3H13Q5T200 AC093525.10-201ENST00000625130 1569 ntBASIC28.2■■■□□ 2.11
ZC3H13Q5T200 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC28.2■■■□□ 2.11
ZC3H13Q5T200 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
ZC3H13Q5T200 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
ZC3H13Q5T200 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
ZC3H13Q5T200 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC28.2■■■□□ 2.11
ZC3H13Q5T200 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC28.2■■■□□ 2.11
ZC3H13Q5T200 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC28.2■■■□□ 2.11
ZC3H13Q5T200 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
ZC3H13Q5T200 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC28.2■■■□□ 2.1
ZC3H13Q5T200 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC28.2■■■□□ 2.1
ZC3H13Q5T200 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
ZC3H13Q5T200 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC28.2■■■□□ 2.1
ZC3H13Q5T200 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC28.2■■■□□ 2.1
ZC3H13Q5T200 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
ZC3H13Q5T200 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC28.19■■■□□ 2.1
ZC3H13Q5T200 PVRIG2P-201ENST00000435460 978 ntBASIC28.19■■■□□ 2.1
ZC3H13Q5T200 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC28.19■■■□□ 2.1
ZC3H13Q5T200 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC28.19■■■□□ 2.1
ZC3H13Q5T200 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC28.19■■■□□ 2.1
ZC3H13Q5T200 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC28.19■■■□□ 2.1
ZC3H13Q5T200 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC28.19■■■□□ 2.1
ZC3H13Q5T200 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
ZC3H13Q5T200 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC28.19■■■□□ 2.1
ZC3H13Q5T200 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC28.19■■■□□ 2.1
ZC3H13Q5T200 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC28.19■■■□□ 2.1
ZC3H13Q5T200 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC28.19■■■□□ 2.1
ZC3H13Q5T200 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC28.19■■■□□ 2.1
ZC3H13Q5T200 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC28.19■■■□□ 2.1
ZC3H13Q5T200 SDHD-206ENST00000528182 754 ntTSL 3 BASIC28.19■■■□□ 2.1
ZC3H13Q5T200 MIR3180-1-201ENST00000580374 94 ntBASIC28.19■■■□□ 2.1
ZC3H13Q5T200 MIR3180-3-201ENST00000584616 94 ntBASIC28.19■■■□□ 2.1
ZC3H13Q5T200 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
ZC3H13Q5T200 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC28.19■■■□□ 2.1
ZC3H13Q5T200 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
ZC3H13Q5T200 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC28.19■■■□□ 2.1
ZC3H13Q5T200 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC28.19■■■□□ 2.1
ZC3H13Q5T200 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC28.19■■■□□ 2.1
ZC3H13Q5T200 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC28.19■■■□□ 2.1
ZC3H13Q5T200 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
ZC3H13Q5T200 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
ZC3H13Q5T200 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC28.18■■■□□ 2.1
ZC3H13Q5T200 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
ZC3H13Q5T200 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC28.18■■■□□ 2.1
ZC3H13Q5T200 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
ZC3H13Q5T200 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
ZC3H13Q5T200 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC28.18■■■□□ 2.1
ZC3H13Q5T200 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC28.18■■■□□ 2.1
ZC3H13Q5T200 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC28.18■■■□□ 2.1
ZC3H13Q5T200 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC28.18■■■□□ 2.1
ZC3H13Q5T200 RASA4DP-201ENST00000460726 1199 ntBASIC28.18■■■□□ 2.1
ZC3H13Q5T200 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC28.18■■■□□ 2.1
ZC3H13Q5T200 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
ZC3H13Q5T200 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
ZC3H13Q5T200 LINC00565-201ENST00000562710 2331 ntBASIC28.18■■■□□ 2.1
ZC3H13Q5T200 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC28.18■■■□□ 2.1
ZC3H13Q5T200 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC28.17■■■□□ 2.1
ZC3H13Q5T200 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC28.17■■■□□ 2.1
ZC3H13Q5T200 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC28.17■■■□□ 2.1
ZC3H13Q5T200 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC28.17■■■□□ 2.1
ZC3H13Q5T200 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
ZC3H13Q5T200 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
ZC3H13Q5T200 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
ZC3H13Q5T200 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC28.17■■■□□ 2.1
ZC3H13Q5T200 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC28.17■■■□□ 2.1
ZC3H13Q5T200 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC28.16■■■□□ 2.1
ZC3H13Q5T200 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC28.16■■■□□ 2.1
ZC3H13Q5T200 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
ZC3H13Q5T200 AC034232.1-201ENST00000506026 1064 ntBASIC28.16■■■□□ 2.1
ZC3H13Q5T200 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC28.16■■■□□ 2.1
ZC3H13Q5T200 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC28.16■■■□□ 2.1
ZC3H13Q5T200 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC28.16■■■□□ 2.1
ZC3H13Q5T200 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC28.16■■■□□ 2.1
ZC3H13Q5T200 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms