Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trim63Q38HM4 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trim63Q38HM4 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trim63Q38HM4 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim63Q38HM4 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim63Q38HM4 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Trim63Q38HM4 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Trim63Q38HM4 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim63Q38HM4 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC13.77□□□□□ -0.21
Trim63Q38HM4 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim63Q38HM4 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim63Q38HM4 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim63Q38HM4 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim63Q38HM4 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Trim63Q38HM4 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim63Q38HM4 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Trim63Q38HM4 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim63Q38HM4 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Trim63Q38HM4 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC13.77□□□□□ -0.21
Trim63Q38HM4 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim63Q38HM4 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim63Q38HM4 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim63Q38HM4 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trim63Q38HM4 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim63Q38HM4 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim63Q38HM4 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim63Q38HM4 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim63Q38HM4 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC13.76□□□□□ -0.21
Trim63Q38HM4 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim63Q38HM4 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim63Q38HM4 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim63Q38HM4 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC13.76□□□□□ -0.21
Trim63Q38HM4 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim63Q38HM4 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC13.76□□□□□ -0.21
Trim63Q38HM4 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC13.76□□□□□ -0.21
Trim63Q38HM4 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC13.76□□□□□ -0.21
Trim63Q38HM4 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim63Q38HM4 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim63Q38HM4 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim63Q38HM4 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim63Q38HM4 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.76□□□□□ -0.21
Trim63Q38HM4 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim63Q38HM4 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim63Q38HM4 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim63Q38HM4 Gm11620-201ENSMUST00000118770 1845 ntBASIC13.76□□□□□ -0.21
Trim63Q38HM4 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim63Q38HM4 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim63Q38HM4 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Trim63Q38HM4 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim63Q38HM4 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim63Q38HM4 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim63Q38HM4 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim63Q38HM4 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim63Q38HM4 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim63Q38HM4 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Trim63Q38HM4 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim63Q38HM4 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Trim63Q38HM4 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim63Q38HM4 Gm7860-201ENSMUST00000121190 879 ntBASIC13.75□□□□□ -0.21
Trim63Q38HM4 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC13.75□□□□□ -0.21
Trim63Q38HM4 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim63Q38HM4 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim63Q38HM4 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Trim63Q38HM4 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Trim63Q38HM4 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim63Q38HM4 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Trim63Q38HM4 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trim63Q38HM4 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim63Q38HM4 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim63Q38HM4 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim63Q38HM4 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim63Q38HM4 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim63Q38HM4 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
Trim63Q38HM4 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.75□□□□□ -0.21
Trim63Q38HM4 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim63Q38HM4 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim63Q38HM4 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim63Q38HM4 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trim63Q38HM4 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim63Q38HM4 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC13.75□□□□□ -0.21
Trim63Q38HM4 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim63Q38HM4 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim63Q38HM4 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim63Q38HM4 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim63Q38HM4 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Trim63Q38HM4 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim63Q38HM4 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim63Q38HM4 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim63Q38HM4 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim63Q38HM4 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim63Q38HM4 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim63Q38HM4 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim63Q38HM4 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim63Q38HM4 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC13.74□□□□□ -0.21
Trim63Q38HM4 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Trim63Q38HM4 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim63Q38HM4 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC13.74□□□□□ -0.21
Trim63Q38HM4 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim63Q38HM4 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim63Q38HM4 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms