Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rom1P32958 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.18□□□□□ -0.3
Rom1P32958 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rom1P32958 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.17□□□□□ -0.3
Rom1P32958 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Rom1P32958 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rom1P32958 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rom1P32958 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rom1P32958 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rom1P32958 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rom1P32958 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rom1P32958 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rom1P32958 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Rom1P32958 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rom1P32958 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rom1P32958 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rom1P32958 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rom1P32958 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Rom1P32958 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rom1P32958 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Rom1P32958 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rom1P32958 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rom1P32958 Gm10033-202ENSMUST00000211874 928 ntBASIC13.17□□□□□ -0.3
Rom1P32958 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rom1P32958 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rom1P32958 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rom1P32958 Gm5421-201ENSMUST00000181698 2354 ntBASIC13.17□□□□□ -0.3
Rom1P32958 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rom1P32958 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rom1P32958 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rom1P32958 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rom1P32958 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Rom1P32958 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rom1P32958 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rom1P32958 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rom1P32958 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rom1P32958 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rom1P32958 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Rom1P32958 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rom1P32958 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rom1P32958 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rom1P32958 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rom1P32958 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rom1P32958 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rom1P32958 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rom1P32958 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rom1P32958 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rom1P32958 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rom1P32958 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rom1P32958 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rom1P32958 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC13.16□□□□□ -0.3
Rom1P32958 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rom1P32958 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rom1P32958 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rom1P32958 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC13.16□□□□□ -0.3
Rom1P32958 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rom1P32958 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rom1P32958 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rom1P32958 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC13.16□□□□□ -0.3
Rom1P32958 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rom1P32958 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rom1P32958 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Rom1P32958 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rom1P32958 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.16□□□□□ -0.3
Rom1P32958 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rom1P32958 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Rom1P32958 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rom1P32958 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Rom1P32958 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Rom1P32958 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rom1P32958 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rom1P32958 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC13.15□□□□□ -0.3
Rom1P32958 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC13.15□□□□□ -0.3
Rom1P32958 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rom1P32958 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rom1P32958 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rom1P32958 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rom1P32958 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rom1P32958 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rom1P32958 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rom1P32958 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC13.15□□□□□ -0.3
Rom1P32958 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC13.15□□□□□ -0.3
Rom1P32958 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rom1P32958 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Rom1P32958 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC13.15□□□□□ -0.3
Rom1P32958 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rom1P32958 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rom1P32958 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rom1P32958 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rom1P32958 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Rom1P32958 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC13.15□□□□□ -0.3
Rom1P32958 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rom1P32958 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rom1P32958 AC153526.5-201ENSMUST00000218661 2147 ntBASIC13.15□□□□□ -0.3
Rom1P32958 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Rom1P32958 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Rom1P32958 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Rom1P32958 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Rom1P32958 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC13.15□□□□□ -0.31
Rom1P32958 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms