Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC22.63■■□□□ 1.21
TMEM88BA6NKF7 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
TMEM88BA6NKF7 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC22.62■■□□□ 1.21
TMEM88BA6NKF7 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TMEM88BA6NKF7 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC22.62■■□□□ 1.21
TMEM88BA6NKF7 BUB3-202ENST00000368859 667 ntTSL 3 BASIC22.62■■□□□ 1.21
TMEM88BA6NKF7 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
TMEM88BA6NKF7 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC22.62■■□□□ 1.21
TMEM88BA6NKF7 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC22.62■■□□□ 1.21
TMEM88BA6NKF7 PPIE-208ENST00000470213 927 ntTSL 3 BASIC22.62■■□□□ 1.21
TMEM88BA6NKF7 AC104819.1-201ENST00000504587 486 ntBASIC22.62■■□□□ 1.21
TMEM88BA6NKF7 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
TMEM88BA6NKF7 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC22.62■■□□□ 1.21
TMEM88BA6NKF7 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC22.62■■□□□ 1.21
TMEM88BA6NKF7 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC22.62■■□□□ 1.21
TMEM88BA6NKF7 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
TMEM88BA6NKF7 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
TMEM88BA6NKF7 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
TMEM88BA6NKF7 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
TMEM88BA6NKF7 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC22.62■■□□□ 1.21
TMEM88BA6NKF7 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TMEM88BA6NKF7 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
TMEM88BA6NKF7 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TMEM88BA6NKF7 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
TMEM88BA6NKF7 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
TMEM88BA6NKF7 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC22.61■■□□□ 1.21
TMEM88BA6NKF7 AL117328.2-201ENST00000624617 1940 ntBASIC22.61■■□□□ 1.21
TMEM88BA6NKF7 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC22.61■■□□□ 1.21
TMEM88BA6NKF7 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC22.61■■□□□ 1.21
TMEM88BA6NKF7 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC22.61■■□□□ 1.21
TMEM88BA6NKF7 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
TMEM88BA6NKF7 NME1-207ENST00000480143 964 ntTSL 2 BASIC22.61■■□□□ 1.21
TMEM88BA6NKF7 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC22.61■■□□□ 1.21
TMEM88BA6NKF7 AC138894.3-201ENST00000603787 634 ntBASIC22.61■■□□□ 1.21
TMEM88BA6NKF7 AL355385.1-201ENST00000606123 409 ntBASIC22.61■■□□□ 1.21
TMEM88BA6NKF7 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC22.61■■□□□ 1.21
TMEM88BA6NKF7 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TMEM88BA6NKF7 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
TMEM88BA6NKF7 LINC01465-201ENST00000408887 1940 ntBASIC22.61■■□□□ 1.21
TMEM88BA6NKF7 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TMEM88BA6NKF7 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
TMEM88BA6NKF7 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
TMEM88BA6NKF7 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC22.6■■□□□ 1.21
TMEM88BA6NKF7 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
TMEM88BA6NKF7 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC22.6■■□□□ 1.21
TMEM88BA6NKF7 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC22.6■■□□□ 1.21
TMEM88BA6NKF7 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TMEM88BA6NKF7 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC22.6■■□□□ 1.21
TMEM88BA6NKF7 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC22.6■■□□□ 1.21
TMEM88BA6NKF7 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC22.6■■□□□ 1.21
TMEM88BA6NKF7 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
TMEM88BA6NKF7 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
TMEM88BA6NKF7 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC22.6■■□□□ 1.21
TMEM88BA6NKF7 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
TMEM88BA6NKF7 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
TMEM88BA6NKF7 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
TMEM88BA6NKF7 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC22.59■■□□□ 1.21
TMEM88BA6NKF7 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
TMEM88BA6NKF7 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC22.59■■□□□ 1.21
TMEM88BA6NKF7 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC22.59■■□□□ 1.21
TMEM88BA6NKF7 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
TMEM88BA6NKF7 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TMEM88BA6NKF7 TLE1-202ENST00000376484 666 ntTSL 3 BASIC22.59■■□□□ 1.21
TMEM88BA6NKF7 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC22.59■■□□□ 1.21
TMEM88BA6NKF7 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
TMEM88BA6NKF7 BX842568.4-201ENST00000421222 227 ntBASIC22.59■■□□□ 1.21
TMEM88BA6NKF7 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC22.59■■□□□ 1.21
TMEM88BA6NKF7 RNA5SP419-201ENST00000515908 135 ntBASIC22.59■■□□□ 1.21
TMEM88BA6NKF7 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC22.59■■□□□ 1.21
TMEM88BA6NKF7 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TMEM88BA6NKF7 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TMEM88BA6NKF7 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC22.59■■□□□ 1.21
TMEM88BA6NKF7 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
TMEM88BA6NKF7 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TMEM88BA6NKF7 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
TMEM88BA6NKF7 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
TMEM88BA6NKF7 PMS2P7-201ENST00000506558 1336 ntBASIC22.58■■□□□ 1.21
TMEM88BA6NKF7 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC22.58■■□□□ 1.21
TMEM88BA6NKF7 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
TMEM88BA6NKF7 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC22.58■■□□□ 1.21
TMEM88BA6NKF7 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC22.58■■□□□ 1.21
TMEM88BA6NKF7 POLD2P1-201ENST00000511220 997 ntBASIC22.58■■□□□ 1.21
TMEM88BA6NKF7 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC22.58■■□□□ 1.21
TMEM88BA6NKF7 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC22.58■■□□□ 1.21
TMEM88BA6NKF7 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
TMEM88BA6NKF7 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
TMEM88BA6NKF7 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC22.58■■□□□ 1.2
TMEM88BA6NKF7 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
TMEM88BA6NKF7 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC22.58■■□□□ 1.2
TMEM88BA6NKF7 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
TMEM88BA6NKF7 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TMEM88BA6NKF7 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
TMEM88BA6NKF7 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC22.57■■□□□ 1.2
TMEM88BA6NKF7 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TMEM88BA6NKF7 COX10-202ENST00000429152 875 ntTSL 2 BASIC22.57■■□□□ 1.2
TMEM88BA6NKF7 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC22.57■■□□□ 1.2
TMEM88BA6NKF7 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC22.57■■□□□ 1.2
TMEM88BA6NKF7 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC22.57■■□□□ 1.2
TMEM88BA6NKF7 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC22.57■■□□□ 1.2
TMEM88BA6NKF7 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC22.57■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms